RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 ASAH1Q13510 395 aa13.35□□□□□ -0.27
VPS52-215ENST00000464425 RBMS2Q15434 407 aaKnown RBP13.35□□□□□ -0.27
VPS52-215ENST00000464425 TSC22D3Q99576 134 aa13.35□□□□□ -0.27
VPS52-215ENST00000464425 AIFM2Q9BRQ8 373 aa13.35□□□□□ -0.27
VPS52-215ENST00000464425 COPZ2Q9P299 210 aa13.35□□□□□ -0.27
VPS52-215ENST00000464425 VSIG4Q9Y279 399 aa13.35□□□□□ -0.27
VPS52-215ENST00000464425 FBXO7Q9Y3I1 522 aa13.35□□□□□ -0.27
VPS52-215ENST00000464425 TRAV41A0A0B4J266 112 aa13.34□□□□□ -0.27
VPS52-215ENST00000464425 RAMP3O60896 148 aa13.34□□□□□ -0.27
VPS52-215ENST00000464425 NDUFB6O95139 128 aa13.34□□□□□ -0.27
VPS52-215ENST00000464425 HPRT1P00492 218 aa13.34□□□□□ -0.27
VPS52-215ENST00000464425 CA2P00918 260 aa13.34□□□□□ -0.27
VPS52-215ENST00000464425 IFITM3Q01628 133 aa13.34□□□□□ -0.27
VPS52-215ENST00000464425 FOXE3Q13461 319 aa13.34□□□□□ -0.27
VPS52-215ENST00000464425 ECSCRQ19T08 205 aa13.34□□□□□ -0.27
VPS52-215ENST00000464425 CXorf66Q5JRM2 361 aaPredicted RBP13.34□□□□□ -0.27
VPS52-215ENST00000464425 FAM103A1Q9BTL3 118 aaKnown RBP13.34□□□□□ -0.27
VPS52-215ENST00000464425 PLEKHA2Q9HB19 425 aa13.34□□□□□ -0.27
VPS52-215ENST00000464425 ZFP57Q9NU63 452 aa13.34□□□□□ -0.27
VPS52-215ENST00000464425 NUDT19A8MXV4 375 aa13.33□□□□□ -0.28
VPS52-215ENST00000464425 IGHG4P01861 327 aa13.33□□□□□ -0.28
VPS52-215ENST00000464425 CRYGBP07316 175 aa13.33□□□□□ -0.28
VPS52-215ENST00000464425 ELANEP08246 267 aa13.33□□□□□ -0.28
VPS52-215ENST00000464425 EGR2P11161 476 aaPredicted RBP13.33□□□□□ -0.28
VPS52-215ENST00000464425 SLC6A1P30531 599 aa13.33□□□□□ -0.28
VPS52-215ENST00000464425 CCR6P51684 374 aa13.33□□□□□ -0.28
VPS52-215ENST00000464425 GNB1P62873 340 aa13.33□□□□□ -0.28
VPS52-215ENST00000464425 PJVKQ0ZLH3 352 aa13.33□□□□□ -0.28
VPS52-215ENST00000464425 MZT2BQ6NZ67 158 aa13.33□□□□□ -0.28
VPS52-215ENST00000464425 ZNF562Q6V9R5 426 aa13.33□□□□□ -0.28
VPS52-215ENST00000464425 ZNF580Q9UK33 172 aa13.33□□□□□ -0.28
VPS52-215ENST00000464425 TBC1D24Q9ULP9 559 aa13.33□□□□□ -0.28
VPS52-215ENST00000464425 NOTCH3Q9UM47 2321 aa13.32□□□□□ -0.28
VPS52-215ENST00000464425 C3orf85A0A1B0GTC6 90 aa13.32□□□□□ -0.28
VPS52-215ENST00000464425 CRYM-AS1A6NIL9 109 aa13.32□□□□□ -0.28
VPS52-215ENST00000464425 H0Y980 276 aa13.32□□□□□ -0.28
VPS52-215ENST00000464425 CNIH1O95406 144 aa13.32□□□□□ -0.28
VPS52-215ENST00000464425 HRASP01112 189 aa13.32□□□□□ -0.28
VPS52-215ENST00000464425 PF4P02776 101 aa13.32□□□□□ -0.28
VPS52-215ENST00000464425 PPIFP30405 207 aaKnown RBP13.32□□□□□ -0.28
VPS52-215ENST00000464425 TAS2R31P59538 309 aa13.32□□□□□ -0.28
VPS52-215ENST00000464425 UBE2KP61086 200 aa13.32□□□□□ -0.28
VPS52-215ENST00000464425 FXYD3Q14802 87 aa13.32□□□□□ -0.28
VPS52-215ENST00000464425 ZNF585BQ52M93 769 aa13.32□□□□□ -0.28
VPS52-215ENST00000464425 C8orf86Q6ZUL3 223 aa13.32□□□□□ -0.28
VPS52-215ENST00000464425 PPP1R27Q86WC6 154 aa13.32□□□□□ -0.28
VPS52-215ENST00000464425 C1QL4Q86Z23 238 aa13.32□□□□□ -0.28
VPS52-215ENST00000464425 TEX45Q8NA69 505 aa13.32□□□□□ -0.28
VPS52-215ENST00000464425 KLHL30-AS1Q8NEE0 82 aa13.32□□□□□ -0.28
VPS52-215ENST00000464425 GRPEL2Q8TAA5 225 aa13.32□□□□□ -0.28
VPS52-215ENST00000464425 KLK15Q9H2R5 256 aa13.32□□□□□ -0.28
VPS52-215ENST00000464425 COMMD9Q9P000 198 aa13.32□□□□□ -0.28
VPS52-215ENST00000464425 TEX13DA0A0J9YY54 714 aaPredicted RBP13.31□□□□□ -0.28
VPS52-215ENST00000464425 ARPC1BO15143 372 aaKnown RBP13.31□□□□□ -0.28
VPS52-215ENST00000464425 RPA2P15927 270 aa13.31□□□□□ -0.28
VPS52-215ENST00000464425 PSMB8P28062 276 aa13.31□□□□□ -0.28
VPS52-215ENST00000464425 POU2AF1Q16633 256 aa13.31□□□□□ -0.28
VPS52-215ENST00000464425 VMA21Q3ZAQ7 101 aa13.31□□□□□ -0.28
VPS52-215ENST00000464425 ZNF695Q8IW36 515 aa13.31□□□□□ -0.28
VPS52-215ENST00000464425 CADM3Q8N126 398 aa13.31□□□□□ -0.28
VPS52-215ENST00000464425 RNF152Q8N8N0 203 aa13.31□□□□□ -0.28
VPS52-215ENST00000464425 MINDY2Q8NBR6 621 aa13.31□□□□□ -0.28
VPS52-215ENST00000464425 ADAD2Q8NCV1 583 aaKnown RBP13.31□□□□□ -0.28
VPS52-215ENST00000464425 ARPC1AQ92747 370 aa13.31□□□□□ -0.28
VPS52-215ENST00000464425 NAA60Q9H7X0 242 aa13.31□□□□□ -0.28
VPS52-215ENST00000464425 NUBP2Q9Y5Y2 271 aa13.31□□□□□ -0.28
VPS52-215ENST00000464425 A0A1W2PN81 502 aa13.3□□□□□ -0.28
VPS52-215ENST00000464425 SERPINE2P07093 398 aa13.3□□□□□ -0.28
VPS52-215ENST00000464425 NQO2P16083 231 aa13.3□□□□□ -0.28
VPS52-215ENST00000464425 CHRNA7P36544 502 aa13.3□□□□□ -0.28
VPS52-215ENST00000464425 LPAR6P43657 344 aa13.3□□□□□ -0.28
VPS52-215ENST00000464425 DEFA1P59665 94 aa13.3□□□□□ -0.28
VPS52-215ENST00000464425 DEFA3P59666 94 aa13.3□□□□□ -0.28
VPS52-215ENST00000464425 TMEM267Q0VDI3 215 aaPredicted RBP13.3□□□□□ -0.28
VPS52-215ENST00000464425 TMEM128Q5BJH2 165 aa13.3□□□□□ -0.28
VPS52-215ENST00000464425 TMEM65Q6PI78 240 aa13.3□□□□□ -0.28
VPS52-215ENST00000464425 UNQ5815/PRO19632Q6UWF5 114 aa13.3□□□□□ -0.28
VPS52-215ENST00000464425 SGPP2Q8IWX5 399 aa13.3□□□□□ -0.28
VPS52-215ENST00000464425 VKORC1L1Q8N0U8 176 aa13.3□□□□□ -0.28
VPS52-215ENST00000464425 LFNGQ8NES3 379 aa13.3□□□□□ -0.28
VPS52-215ENST00000464425 VSTM2AQ8TAG5 236 aa13.3□□□□□ -0.28
VPS52-215ENST00000464425 CASTOR1Q8WTX7 329 aa13.3□□□□□ -0.28
VPS52-215ENST00000464425 TMEM230Q96A57 120 aa13.3□□□□□ -0.28
VPS52-215ENST00000464425 GALNT14Q96FL9 552 aa13.3□□□□□ -0.28
VPS52-215ENST00000464425 RHOVQ96L33 236 aa13.3□□□□□ -0.28
VPS52-215ENST00000464425 TP53RKQ96S44 253 aa13.3□□□□□ -0.28
VPS52-215ENST00000464425 KCNIP3Q9Y2W7 256 aa13.3□□□□□ -0.28
VPS52-215ENST00000464425 OR2A4O95047 310 aa13.29□□□□□ -0.28
VPS52-215ENST00000464425 IGLV1-40P01703 118 aa13.29□□□□□ -0.28
VPS52-215ENST00000464425 TCRBP04435 133 aa13.29□□□□□ -0.28
VPS52-215ENST00000464425 AKR1C4P17516 323 aa13.29□□□□□ -0.28
VPS52-215ENST00000464425 UCP1P25874 307 aa13.29□□□□□ -0.28
VPS52-215ENST00000464425 CRIP2P52943 208 aaPredicted RBP13.29□□□□□ -0.28
VPS52-215ENST00000464425 UBE2MP61081 183 aaKnown RBP13.29□□□□□ -0.28
VPS52-215ENST00000464425 SSBP2P81877 361 aaPredicted RBP13.29□□□□□ -0.28
VPS52-215ENST00000464425 DHODHQ02127 395 aa13.29□□□□□ -0.28
VPS52-215ENST00000464425 MRGPRG-AS1Q2M3A8 158 aa13.29□□□□□ -0.28
VPS52-215ENST00000464425 C19orf54Q5BKX5 351 aa13.29□□□□□ -0.28
VPS52-215ENST00000464425 SLC25A42Q86VD7 318 aa13.29□□□□□ -0.28
VPS52-215ENST00000464425 PUSL1Q8N0Z8 303 aaKnown RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 106.8 ms