RNA–Protein interactions for RNA: ENST00000463011.5

GPNMB-205, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 378 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-205ENST00000463011 CPMP14384 443 aa2.06□□□□□ -2.08
GPNMB-205ENST00000463011 GNG10P50151 68 aa2.06□□□□□ -2.08
GPNMB-205ENST00000463011 RPS20P60866 119 aaKnown RBP2.06□□□□□ -2.08
GPNMB-205ENST00000463011 RPL30P62888 115 aaKnown RBP2.06□□□□□ -2.08
GPNMB-205ENST00000463011 HIST1H3AP68431 136 aa2.06□□□□□ -2.08
GPNMB-205ENST00000463011 H3F3AP84243 136 aa2.06□□□□□ -2.08
GPNMB-205ENST00000463011 TMEM42Q69YG0 159 aa2.06□□□□□ -2.08
GPNMB-205ENST00000463011 IGFL3Q6UXB1 125 aa2.06□□□□□ -2.08
GPNMB-205ENST00000463011 Q6ZS49 121 aa2.06□□□□□ -2.08
GPNMB-205ENST00000463011 TBC1D19Q8N5T2 526 aa2.06□□□□□ -2.08
GPNMB-205ENST00000463011 ZNF676Q8N7Q3 588 aa2.06□□□□□ -2.08
GPNMB-205ENST00000463011 OR51A2Q8NGJ7 313 aa2.06□□□□□ -2.08
GPNMB-205ENST00000463011 OR4X1Q8NH49 305 aa2.06□□□□□ -2.08
GPNMB-205ENST00000463011 BORCS7Q96B45 105 aa2.06□□□□□ -2.08
GPNMB-205ENST00000463011 ROPN1LQ96C74 230 aa2.06□□□□□ -2.08
GPNMB-205ENST00000463011 TMEM147Q9BVK8 224 aa2.06□□□□□ -2.08
GPNMB-205ENST00000463011 TMEM222Q9H0R3 208 aa2.06□□□□□ -2.08
GPNMB-205ENST00000463011 NMNAT1Q9HAN9 279 aaPredicted RBP2.06□□□□□ -2.08
GPNMB-205ENST00000463011 ENY2Q9NPA8 101 aa2.06□□□□□ -2.08
GPNMB-205ENST00000463011 PRTFDC1Q9NRG1 225 aa2.06□□□□□ -2.08
GPNMB-205ENST00000463011 PAQR5Q9NXK6 330 aaPredicted RBP2.06□□□□□ -2.08
GPNMB-205ENST00000463011 ZNF391Q9UJN7 358 aa2.06□□□□□ -2.08
GPNMB-205ENST00000463011 ABCC12Q96J65 1359 aa2.06□□□□□ -2.08
GPNMB-205ENST00000463011 HECW2Q9P2P5 1572 aa2.06□□□□□ -2.08
GPNMB-205ENST00000463011 A0A1W2PNN7 141 aa2.05□□□□□ -2.08
GPNMB-205ENST00000463011 A0A1W2PNU3 283 aaPredicted RBP2.05□□□□□ -2.08
GPNMB-205ENST00000463011 hADV38S2A0JD32 116 aa2.05□□□□□ -2.08
GPNMB-205ENST00000463011 TMEM238C9JI98 176 aa2.05□□□□□ -2.08
GPNMB-205ENST00000463011 E5RI56 91 aa2.05□□□□□ -2.08
GPNMB-205ENST00000463011 PDE6DO43924 150 aa2.05□□□□□ -2.08
GPNMB-205ENST00000463011 OR7C1O76099 320 aaPredicted RBP2.05□□□□□ -2.08
GPNMB-205ENST00000463011 CDS2O95674 445 aa2.05□□□□□ -2.08
GPNMB-205ENST00000463011 CRYZL1O95825 349 aa2.05□□□□□ -2.08
GPNMB-205ENST00000463011 IGLV3-19P01714 112 aa2.05□□□□□ -2.08
GPNMB-205ENST00000463011 ZNF705DP0CH99 300 aaPredicted RBP2.05□□□□□ -2.08
GPNMB-205ENST00000463011 RBM11P57052 281 aaKnown RBP2.05□□□□□ -2.08
GPNMB-205ENST00000463011 RWDD2BP57060 319 aa2.05□□□□□ -2.08
GPNMB-205ENST00000463011 TAS2R20P59543 309 aa2.05□□□□□ -2.08
GPNMB-205ENST00000463011 IGFBP7Q16270 282 aa2.05□□□□□ -2.08
GPNMB-205ENST00000463011 DHRS4L2Q6PKH6 230 aa2.05□□□□□ -2.08
GPNMB-205ENST00000463011 SMARCD3Q6STE5 483 aa2.05□□□□□ -2.08
GPNMB-205ENST00000463011 SSX8Q7RTT4 187 aa2.05□□□□□ -2.08
GPNMB-205ENST00000463011 CMTM2Q8TAZ6 248 aa2.05□□□□□ -2.08
GPNMB-205ENST00000463011 FGF13Q92913 245 aa2.05□□□□□ -2.08
GPNMB-205ENST00000463011 MIEN1Q9BRT3 115 aa2.05□□□□□ -2.08
GPNMB-205ENST00000463011 WDR61Q9GZS3 305 aaKnown RBP2.05□□□□□ -2.08
GPNMB-205ENST00000463011 RNASE7Q9H1E1 156 aaKnown RBP2.05□□□□□ -2.08
GPNMB-205ENST00000463011 CISHQ9NSE2 258 aa2.05□□□□□ -2.08
GPNMB-205ENST00000463011 MINOS1-NBL1R4GNA1 71 aa2.05□□□□□ -2.08
GPNMB-205ENST00000463011 LTBP4Q8N2S1 1624 aa2.05□□□□□ -2.08
GPNMB-205ENST00000463011 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.05□□□□□ -2.08
GPNMB-205ENST00000463011 TRPM3Q9HCF6 1732 aaPredicted RBP2.05□□□□□ -2.08
GPNMB-205ENST00000463011 THADAQ6YHU6 1953 aa2.05□□□□□ -2.08
GPNMB-205ENST00000463011 TRBV20OR9-2A0A075B6H5 130 aa2.04□□□□□ -2.08
GPNMB-205ENST00000463011 IGKV2-24A0A0C4DH68 120 aa2.04□□□□□ -2.08
GPNMB-205ENST00000463011 FAM159BA6NKW6 160 aa2.04□□□□□ -2.08
GPNMB-205ENST00000463011 TXNDC9O14530 226 aa2.04□□□□□ -2.08
GPNMB-205ENST00000463011 ZNF189O75820 626 aaPredicted RBP2.04□□□□□ -2.08
GPNMB-205ENST00000463011 IGLV6-57P01721 117 aa2.04□□□□□ -2.08
GPNMB-205ENST00000463011 SRP19P09132 144 aaKnown RBP2.04□□□□□ -2.08
GPNMB-205ENST00000463011 RNASE2P10153 161 aaKnown RBP2.04□□□□□ -2.08
GPNMB-205ENST00000463011 S100A7P31151 101 aa2.04□□□□□ -2.08
GPNMB-205ENST00000463011 IAH1Q2TAA2 248 aaPredicted RBP2.04□□□□□ -2.08
GPNMB-205ENST00000463011 CAMSAP1Q5T5Y3 1602 aa2.04□□□□□ -2.08
GPNMB-205ENST00000463011 CLDND2Q8NHS1 167 aa2.04□□□□□ -2.08
GPNMB-205ENST00000463011 MCFD2Q8NI22 146 aa2.04□□□□□ -2.08
GPNMB-205ENST00000463011 MRPL30Q8TCC3 161 aaKnown RBP2.04□□□□□ -2.08
GPNMB-205ENST00000463011 ANP32BQ92688 251 aaKnown RBP2.04□□□□□ -2.08
GPNMB-205ENST00000463011 TSPAN32Q96QS1 320 aa2.04□□□□□ -2.08
GPNMB-205ENST00000463011 COMMD5Q9GZQ3 224 aa2.04□□□□□ -2.08
GPNMB-205ENST00000463011 UQCC1Q9NVA1 299 aa2.04□□□□□ -2.08
GPNMB-205ENST00000463011 ARMC1Q9NVT9 282 aa2.04□□□□□ -2.08
GPNMB-205ENST00000463011 OPTCQ9UBM4 332 aa2.04□□□□□ -2.08
GPNMB-205ENST00000463011 HSPE1-MOB4S4R3N1 261 aa2.04□□□□□ -2.08
GPNMB-205ENST00000463011 NAV1Q8NEY1 1877 aa2.03□□□□□ -2.08
GPNMB-205ENST00000463011 EIF3AQ14152 1382 aaKnown RBP2.03□□□□□ -2.08
GPNMB-205ENST00000463011 A0A1B0GW54 56 aa2.03□□□□□ -2.08
GPNMB-205ENST00000463011 A0A1W2PNM2 257 aa2.03□□□□□ -2.08
GPNMB-205ENST00000463011 OR2B3O76000 313 aa2.03□□□□□ -2.08
GPNMB-205ENST00000463011 CD5P06127 495 aa2.03□□□□□ -2.08
GPNMB-205ENST00000463011 GZMBP10144 247 aa2.03□□□□□ -2.08
GPNMB-205ENST00000463011 COL8A2P25067 703 aa2.03□□□□□ -2.08
GPNMB-205ENST00000463011 CSN1S1P47710 185 aa2.03□□□□□ -2.08
GPNMB-205ENST00000463011 XCL1P47992 114 aa2.03□□□□□ -2.08
GPNMB-205ENST00000463011 RPL19P84098 196 aaKnown RBP2.03□□□□□ -2.08
GPNMB-205ENST00000463011 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.03□□□□□ -2.08
GPNMB-205ENST00000463011 OOSP2Q86WS3 158 aa2.03□□□□□ -2.08
GPNMB-205ENST00000463011 ZNF283Q8N7M2 679 aa2.03□□□□□ -2.08
GPNMB-205ENST00000463011 OR52L1Q8NGH7 329 aa2.03□□□□□ -2.08
GPNMB-205ENST00000463011 ZNF675Q8TD23 568 aa2.03□□□□□ -2.08
GPNMB-205ENST00000463011 CT55Q8WUE5 264 aa2.03□□□□□ -2.08
GPNMB-205ENST00000463011 SELENOSQ9BQE4 189 aa2.03□□□□□ -2.08
GPNMB-205ENST00000463011 TM2D3Q9BRN9 247 aa2.03□□□□□ -2.08
GPNMB-205ENST00000463011 C11orf68Q9H3H3 251 aaKnown RBP2.03□□□□□ -2.08
GPNMB-205ENST00000463011 EFCAB1Q9HAE3 211 aa2.03□□□□□ -2.08
GPNMB-205ENST00000463011 GID8Q9NWU2 228 aa2.03□□□□□ -2.08
GPNMB-205ENST00000463011 TXNL4BQ9NX01 149 aaKnown RBP2.03□□□□□ -2.08
GPNMB-205ENST00000463011 FBXL12Q9NXK8 326 aa2.03□□□□□ -2.08
GPNMB-205ENST00000463011 RSL24D1Q9UHA3 163 aaKnown RBP2.03□□□□□ -2.08
GPNMB-205ENST00000463011 FUT9Q9Y231 359 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms