RNA–Protein interactions for RNA: ENST00000462668.5

SMC4-203, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 4,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-203ENST00000462668 NLRC5Q86WI3 1866 aa1.84□□□□□ -2.11
SMC4-203ENST00000462668 SIPA1L1O43166 1804 aa1.84□□□□□ -2.11
SMC4-203ENST00000462668 CSMD1Q96PZ7 3565 aa1.84□□□□□ -2.11
SMC4-203ENST00000462668 IGHV3-21A0A0B4J1V1 117 aa1.84□□□□□ -2.11
SMC4-203ENST00000462668 EEF1E1-BLOC1S5C9J1V9 151 aa1.84□□□□□ -2.11
SMC4-203ENST00000462668 EEF1E1O43324 174 aaKnown RBP1.84□□□□□ -2.11
SMC4-203ENST00000462668 NOS1APO75052 506 aaPredicted RBP1.84□□□□□ -2.11
SMC4-203ENST00000462668 PTHLHP12272 177 aa1.84□□□□□ -2.11
SMC4-203ENST00000462668 MPIP34949 423 aa1.84□□□□□ -2.11
SMC4-203ENST00000462668 CTBP2P56545 445 aa1.84□□□□□ -2.11
SMC4-203ENST00000462668 MOGQ16653 247 aa1.84□□□□□ -2.11
SMC4-203ENST00000462668 LGALS9BQ3B8N2 356 aa1.84□□□□□ -2.11
SMC4-203ENST00000462668 LGALS9CQ6DKI2 356 aa1.84□□□□□ -2.11
SMC4-203ENST00000462668 SBSNQ6UWP8 590 aa1.84□□□□□ -2.11
SMC4-203ENST00000462668 C16orf47Q6ZP98 133 aaPredicted RBP1.84□□□□□ -2.11
SMC4-203ENST00000462668 KLF14Q8TD94 323 aaPredicted RBP1.84□□□□□ -2.11
SMC4-203ENST00000462668 NEK7Q8TDX7 302 aa1.84□□□□□ -2.11
SMC4-203ENST00000462668 HDHD3Q9BSH5 251 aaPredicted RBP1.84□□□□□ -2.11
SMC4-203ENST00000462668 RNF122Q9H9V4 155 aa1.84□□□□□ -2.11
SMC4-203ENST00000462668 TRBV6-6A0A0A6YYG2 114 aa1.84□□□□□ -2.12
SMC4-203ENST00000462668 PDYNP01213 254 aa1.84□□□□□ -2.12
SMC4-203ENST00000462668 CCR6P51684 374 aa1.84□□□□□ -2.12
SMC4-203ENST00000462668 HACD4Q5VWC8 232 aa1.84□□□□□ -2.12
SMC4-203ENST00000462668 ADM2Q7Z4H4 148 aa1.84□□□□□ -2.12
SMC4-203ENST00000462668 DAZ1Q9NQZ3 744 aaKnown RBP1.84□□□□□ -2.12
SMC4-203ENST00000462668 ABCC12Q96J65 1359 aa1.84□□□□□ -2.12
SMC4-203ENST00000462668 SCO1O75880 301 aa1.83□□□□□ -2.12
SMC4-203ENST00000462668 CCNKO75909 580 aa1.83□□□□□ -2.12
SMC4-203ENST00000462668 FAM78BQ5VT40 261 aa1.83□□□□□ -2.12
SMC4-203ENST00000462668 CALHM3Q86XJ0 350 aa1.83□□□□□ -2.12
SMC4-203ENST00000462668 ZNF721Q8TF20 911 aa1.83□□□□□ -2.12
SMC4-203ENST00000462668 DGCR14Q96DF8 476 aaKnown RBP1.83□□□□□ -2.12
SMC4-203ENST00000462668 LINC00477Q96M19 166 aa1.83□□□□□ -2.12
SMC4-203ENST00000462668 IP6K3Q96PC2 410 aa1.83□□□□□ -2.12
SMC4-203ENST00000462668 TSPAN32Q96QS1 320 aa1.83□□□□□ -2.12
SMC4-203ENST00000462668 C20orf27Q9GZN8 174 aa1.83□□□□□ -2.12
SMC4-203ENST00000462668 OR2D2Q9H210 308 aa1.83□□□□□ -2.12
SMC4-203ENST00000462668 TAS2R7Q9NYW3 318 aa1.83□□□□□ -2.12
SMC4-203ENST00000462668 TRIP11Q15643 1979 aa1.83□□□□□ -2.12
SMC4-203ENST00000462668 EXOC1LA0A1B0GW35 172 aa1.83□□□□□ -2.12
SMC4-203ENST00000462668 OR4C46A6NHA9 309 aa1.83□□□□□ -2.12
SMC4-203ENST00000462668 HBZP02008 142 aa1.83□□□□□ -2.12
SMC4-203ENST00000462668 CRYBA4P53673 196 aa1.83□□□□□ -2.12
SMC4-203ENST00000462668 ENDOGQ14249 297 aaKnown RBP1.83□□□□□ -2.12
SMC4-203ENST00000462668 DEFB116Q30KQ4 102 aa1.83□□□□□ -2.12
SMC4-203ENST00000462668 UBE2NLQ5JXB2 153 aa1.83□□□□□ -2.12
SMC4-203ENST00000462668 CYB5R2Q6BCY4 276 aa1.83□□□□□ -2.12
SMC4-203ENST00000462668 NAA40Q86UY6 237 aa1.83□□□□□ -2.12
SMC4-203ENST00000462668 MKXQ8IYA7 352 aa1.83□□□□□ -2.12
SMC4-203ENST00000462668 CD200R1Q8TD46 325 aa1.83□□□□□ -2.12
SMC4-203ENST00000462668 EIF5A2Q9GZV4 153 aaKnown RBP1.83□□□□□ -2.12
SMC4-203ENST00000462668 GLTPQ9NZD2 209 aa1.83□□□□□ -2.12
SMC4-203ENST00000462668 LSM5Q9Y4Y9 91 aaKnown RBP1.83□□□□□ -2.12
SMC4-203ENST00000462668 S4R3C0 116 aa1.83□□□□□ -2.12
SMC4-203ENST00000462668 TRIOO75962 3097 aa1.83□□□□□ -2.12
SMC4-203ENST00000462668 FRYQ5TBA9 3013 aa1.83□□□□□ -2.12
SMC4-203ENST00000462668 TRAV8-1A0A0A6YYK1 113 aa1.83□□□□□ -2.12
SMC4-203ENST00000462668 HSPE1P61604 102 aaKnown RBP1.83□□□□□ -2.12
SMC4-203ENST00000462668 SLC35A2P78381 396 aa1.83□□□□□ -2.12
SMC4-203ENST00000462668 TMEM256Q8N2U0 113 aa1.83□□□□□ -2.12
SMC4-203ENST00000462668 LHFPL5Q8TAF8 219 aa1.83□□□□□ -2.12
SMC4-203ENST00000462668 ITLN2Q8WWU7 325 aaPredicted RBP1.83□□□□□ -2.12
SMC4-203ENST00000462668 MS4A6EQ96DS6 147 aa1.83□□□□□ -2.12
SMC4-203ENST00000462668 PHYHIPLQ96FC7 376 aa1.83□□□□□ -2.12
SMC4-203ENST00000462668 ZNF430Q9H8G1 570 aaPredicted RBP1.83□□□□□ -2.12
SMC4-203ENST00000462668 PARVBQ9HBI1 364 aa1.83□□□□□ -2.12
SMC4-203ENST00000462668 ZNF586Q9NXT0 402 aa1.83□□□□□ -2.12
SMC4-203ENST00000462668 WASHC3Q9Y3C0 194 aa1.83□□□□□ -2.12
SMC4-203ENST00000462668 DNAH3Q8TD57 4116 aa1.83□□□□□ -2.12
SMC4-203ENST00000462668 CACNA1AO00555 2505 aa1.83□□□□□ -2.12
SMC4-203ENST00000462668 IGKV1OR2-108A0A075B7D4 117 aa1.83□□□□□ -2.12
SMC4-203ENST00000462668 CNIH1O95406 144 aa1.83□□□□□ -2.12
SMC4-203ENST00000462668 OR13C7P0DN81 318 aa1.83□□□□□ -2.12
SMC4-203ENST00000462668 KRTAP10-12P60413 245 aa1.83□□□□□ -2.12
SMC4-203ENST00000462668 RAB2AP61019 212 aa1.83□□□□□ -2.12
SMC4-203ENST00000462668 BATFQ16520 125 aa1.83□□□□□ -2.12
SMC4-203ENST00000462668 LAIR2Q6ISS4 152 aa1.83□□□□□ -2.12
SMC4-203ENST00000462668 CCDC121Q6ZUS5 278 aa1.83□□□□□ -2.12
SMC4-203ENST00000462668 MIR7-3HGQ8N6C7 128 aa1.83□□□□□ -2.12
SMC4-203ENST00000462668 TEX47Q8TBZ9 253 aa1.83□□□□□ -2.12
SMC4-203ENST00000462668 FRZBQ92765 325 aa1.83□□□□□ -2.12
SMC4-203ENST00000462668 CYSRT1A8MQ03 144 aa1.82□□□□□ -2.12
SMC4-203ENST00000462668 OR11H12B2RN74 326 aa1.82□□□□□ -2.12
SMC4-203ENST00000462668 SEC11BP0C7V7 166 aa1.82□□□□□ -2.12
SMC4-203ENST00000462668 MAGEA12P43365 314 aa1.82□□□□□ -2.12
SMC4-203ENST00000462668 FKBP1AP62942 108 aaKnown RBP1.82□□□□□ -2.12
SMC4-203ENST00000462668 TFAMQ00059 246 aaKnown RBP1.82□□□□□ -2.12
SMC4-203ENST00000462668 PDGFRLQ15198 375 aa1.82□□□□□ -2.12
SMC4-203ENST00000462668 TMED4Q7Z7H5 227 aa1.82□□□□□ -2.12
SMC4-203ENST00000462668 OR11H1Q8NG94 326 aa1.82□□□□□ -2.12
SMC4-203ENST00000462668 OR11H2Q8NH07 326 aa1.82□□□□□ -2.12
SMC4-203ENST00000462668 BORCS7Q96B45 105 aa1.82□□□□□ -2.12
SMC4-203ENST00000462668 ULBP1Q9BZM6 244 aa1.82□□□□□ -2.12
SMC4-203ENST00000462668 AICDAQ9GZX7 198 aa1.82□□□□□ -2.12
SMC4-203ENST00000462668 CMTM6Q9NX76 183 aa1.82□□□□□ -2.12
SMC4-203ENST00000462668 CPSF1Q10570 1443 aaKnown RBP1.82□□□□□ -2.12
SMC4-203ENST00000462668 SCN9AQ15858 1988 aa1.82□□□□□ -2.12
SMC4-203ENST00000462668 ZBED9Q6R2W3 1325 aa1.82□□□□□ -2.12
SMC4-203ENST00000462668 MYOM3Q5VTT5 1437 aa1.82□□□□□ -2.12
SMC4-203ENST00000462668 TMED7-TICAM2A0A0A6YYA0 188 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms