RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 SS18L1O75177 396 aaPredicted RBP12.92□□□□□ -0.34
LMNB1-203ENST00000460265 PRDX2P32119 198 aa12.92□□□□□ -0.34
LMNB1-203ENST00000460265 RANP62826 216 aaKnown RBP12.92□□□□□ -0.34
LMNB1-203ENST00000460265 ATP6V1FQ16864 119 aa12.92□□□□□ -0.34
LMNB1-203ENST00000460265 BSXQ3C1V8 233 aa12.92□□□□□ -0.34
LMNB1-203ENST00000460265 MOB1BQ7L9L4 216 aa12.92□□□□□ -0.34
LMNB1-203ENST00000460265 ZCCHC14Q8WYQ9 949 aaKnown RBP12.92□□□□□ -0.34
LMNB1-203ENST00000460265 TMEM56Q96MV1 263 aa12.92□□□□□ -0.34
LMNB1-203ENST00000460265 OR2V2Q96R30 315 aa12.92□□□□□ -0.34
LMNB1-203ENST00000460265 ALKBH7Q9BT30 221 aaPredicted RBP12.92□□□□□ -0.34
LMNB1-203ENST00000460265 TMEM56-RWDD3S4R434 201 aa12.92□□□□□ -0.34
LMNB1-203ENST00000460265 MAP1LC3B2A6NCE7 125 aa12.92□□□□□ -0.34
LMNB1-203ENST00000460265 MLNRO43193 412 aa12.92□□□□□ -0.34
LMNB1-203ENST00000460265 KLF3P57682 345 aaPredicted RBP12.92□□□□□ -0.34
LMNB1-203ENST00000460265 ACSF3Q4G176 576 aaPredicted RBP12.92□□□□□ -0.34
LMNB1-203ENST00000460265 PRAMEF5Q5TYX0 476 aa12.92□□□□□ -0.34
LMNB1-203ENST00000460265 ZCCHC24Q8N2G6 241 aaKnown RBP12.92□□□□□ -0.34
LMNB1-203ENST00000460265 OR2T10Q8NGZ9 312 aa12.92□□□□□ -0.34
LMNB1-203ENST00000460265 MAP1LC3BQ9GZQ8 125 aa12.92□□□□□ -0.34
LMNB1-203ENST00000460265 PFN1P07737 140 aaKnown RBP12.92□□□□□ -0.34
LMNB1-203ENST00000460265 BCL2P10415 239 aa12.92□□□□□ -0.34
LMNB1-203ENST00000460265 RTP5Q14D33 572 aa12.92□□□□□ -0.34
LMNB1-203ENST00000460265 TMEM241Q24JQ0 296 aa12.92□□□□□ -0.34
LMNB1-203ENST00000460265 LINC00596Q86U02 117 aa12.92□□□□□ -0.34
LMNB1-203ENST00000460265 VKORC1L1Q8N0U8 176 aa12.92□□□□□ -0.34
LMNB1-203ENST00000460265 LRTM2Q8N967 370 aa12.92□□□□□ -0.34
LMNB1-203ENST00000460265 RAB40CQ96S21 281 aa12.92□□□□□ -0.34
LMNB1-203ENST00000460265 TNFSF13O75888 250 aa12.91□□□□□ -0.34
LMNB1-203ENST00000460265 OR5G3P0C626 314 aa12.91□□□□□ -0.34
LMNB1-203ENST00000460265 CCL8P80075 99 aa12.91□□□□□ -0.34
LMNB1-203ENST00000460265 Q6P435 159 aa12.91□□□□□ -0.34
LMNB1-203ENST00000460265 OR4C5Q8NGB2 326 aa12.91□□□□□ -0.34
LMNB1-203ENST00000460265 OR13A1Q8NGR1 328 aa12.91□□□□□ -0.34
LMNB1-203ENST00000460265 TXN2Q99757 166 aa12.91□□□□□ -0.34
LMNB1-203ENST00000460265 A8MXE2 369 aa12.91□□□□□ -0.34
LMNB1-203ENST00000460265 MRPL52Q86TS9 123 aaKnown RBP12.91□□□□□ -0.34
LMNB1-203ENST00000460265 RYDENQ9NUL5 291 aaKnown RBP12.91□□□□□ -0.34
LMNB1-203ENST00000460265 CLCF1Q9UBD9 225 aa12.91□□□□□ -0.34
LMNB1-203ENST00000460265 OOEPA6NGQ2 149 aa12.9□□□□□ -0.34
LMNB1-203ENST00000460265 NKX6-3A6NJ46 265 aa12.9□□□□□ -0.34
LMNB1-203ENST00000460265 AHRRA9YTQ3 701 aa12.9□□□□□ -0.34
LMNB1-203ENST00000460265 LHX4Q969G2 390 aa12.9□□□□□ -0.34
LMNB1-203ENST00000460265 ATP5SQ99766 215 aa12.9□□□□□ -0.34
LMNB1-203ENST00000460265 TRAV34A0A0B4J273 112 aa12.9□□□□□ -0.34
LMNB1-203ENST00000460265 IGHV2OR16-5A0A0B4J2B6 119 aa12.9□□□□□ -0.34
LMNB1-203ENST00000460265 S1PR2O95136 353 aa12.9□□□□□ -0.34
LMNB1-203ENST00000460265 ERVK-16P61578 105 aa12.9□□□□□ -0.34
LMNB1-203ENST00000460265 TGIF2LYQ8IUE0 185 aa12.9□□□□□ -0.34
LMNB1-203ENST00000460265 OR51G1Q8NGK1 321 aa12.9□□□□□ -0.34
LMNB1-203ENST00000460265 NAT8Q9UHE5 227 aa12.9□□□□□ -0.34
LMNB1-203ENST00000460265 SLC38A11Q08AI6 406 aa12.9□□□□□ -0.34
LMNB1-203ENST00000460265 ZNF497Q6ZNH5 498 aa12.9□□□□□ -0.34
LMNB1-203ENST00000460265 OR4A16Q8NH70 328 aa12.9□□□□□ -0.34
LMNB1-203ENST00000460265 ITLN1Q8WWA0 313 aa12.9□□□□□ -0.34
LMNB1-203ENST00000460265 TRAPPC1Q9Y5R8 145 aa12.9□□□□□ -0.34
LMNB1-203ENST00000460265 SELENOTP62341 195 aa12.89□□□□□ -0.35
LMNB1-203ENST00000460265 WDR82Q6UXN9 313 aa12.89□□□□□ -0.35
LMNB1-203ENST00000460265 ZNF292O60281 2723 aa12.89□□□□□ -0.35
LMNB1-203ENST00000460265 C17orf98A8MV24 154 aa12.89□□□□□ -0.35
LMNB1-203ENST00000460265 IQCF6A8MYZ5 107 aa12.89□□□□□ -0.35
LMNB1-203ENST00000460265 PRRG2O14669 202 aa12.89□□□□□ -0.35
LMNB1-203ENST00000460265 PDLIM4P50479 330 aa12.89□□□□□ -0.35
LMNB1-203ENST00000460265 ID3Q02535 119 aa12.89□□□□□ -0.35
LMNB1-203ENST00000460265 ACP7Q6ZNF0 438 aa12.89□□□□□ -0.35
LMNB1-203ENST00000460265 OR10P1Q8NGE3 313 aa12.89□□□□□ -0.35
LMNB1-203ENST00000460265 PARD6GQ9BYG4 376 aaPredicted RBP12.89□□□□□ -0.35
LMNB1-203ENST00000460265 SLC25A22Q9H936 323 aa12.89□□□□□ -0.35
LMNB1-203ENST00000460265 A0A0U1RQK1 487 aa12.89□□□□□ -0.35
LMNB1-203ENST00000460265 ZNF320A2RRD8 509 aa12.89□□□□□ -0.35
LMNB1-203ENST00000460265 PITX3O75364 302 aa12.89□□□□□ -0.35
LMNB1-203ENST00000460265 DAZAP2Q15038 168 aaPredicted RBP12.89□□□□□ -0.35
LMNB1-203ENST00000460265 NMSQ5H8A3 153 aa12.89□□□□□ -0.35
LMNB1-203ENST00000460265 H1FXQ92522 213 aaKnown RBP12.89□□□□□ -0.35
LMNB1-203ENST00000460265 STARD4Q96DR4 205 aa12.89□□□□□ -0.35
LMNB1-203ENST00000460265 C20orf144Q9BQM9 153 aa12.89□□□□□ -0.35
LMNB1-203ENST00000460265 CISD1Q9NZ45 108 aaKnown RBP12.89□□□□□ -0.35
LMNB1-203ENST00000460265 RPH3ALQ9UNE2 315 aa12.89□□□□□ -0.35
LMNB1-203ENST00000460265 WIPI2Q9Y4P8 454 aa12.89□□□□□ -0.35
LMNB1-203ENST00000460265 ANKHD1Q8IWZ3 2542 aaKnown RBP12.89□□□□□ -0.35
LMNB1-203ENST00000460265 PIGBOS1A0A0B4J2F0 54 aa12.88□□□□□ -0.35
LMNB1-203ENST00000460265 IGHV1-18A0A0C4DH31 117 aa12.88□□□□□ -0.35
LMNB1-203ENST00000460265 KIAA1324LA8MWY0 1029 aaPredicted RBP12.88□□□□□ -0.35
LMNB1-203ENST00000460265 MZT1Q08AG7 82 aa12.88□□□□□ -0.35
LMNB1-203ENST00000460265 WDR31Q8NA23 367 aa12.88□□□□□ -0.35
LMNB1-203ENST00000460265 CMTM2Q8TAZ6 248 aa12.88□□□□□ -0.35
LMNB1-203ENST00000460265 ZDHHC16Q969W1 377 aa12.88□□□□□ -0.35
LMNB1-203ENST00000460265 OR4C12Q96R67 309 aa12.88□□□□□ -0.35
LMNB1-203ENST00000460265 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.88□□□□□ -0.35
LMNB1-203ENST00000460265 PCSK5Q92824 1860 aa12.88□□□□□ -0.35
LMNB1-203ENST00000460265 IFNA1P01562 189 aa12.88□□□□□ -0.35
LMNB1-203ENST00000460265 LYG1Q8N1E2 194 aa12.88□□□□□ -0.35
LMNB1-203ENST00000460265 GP6Q9HCN6 339 aa12.88□□□□□ -0.35
LMNB1-203ENST00000460265 TMEM106BQ9NUM4 274 aa12.88□□□□□ -0.35
LMNB1-203ENST00000460265 OR6C3Q9NZP0 311 aa12.88□□□□□ -0.35
LMNB1-203ENST00000460265 K7EM74 188 aa12.87□□□□□ -0.35
LMNB1-203ENST00000460265 HRASP01112 189 aa12.87□□□□□ -0.35
LMNB1-203ENST00000460265 Q6ZVH6 145 aa12.87□□□□□ -0.35
LMNB1-203ENST00000460265 STPG4Q8N801 248 aa12.87□□□□□ -0.35
LMNB1-203ENST00000460265 SAMD10Q9BYL1 202 aa12.87□□□□□ -0.35
LMNB1-203ENST00000460265 ZG16O60844 167 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms