RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 FXYD4P59646 89 aa12.42□□□□□ -0.42
COL7A1-203ENST00000459756 HERV-K104P61576 105 aa12.42□□□□□ -0.42
COL7A1-203ENST00000459756 VKORC1L1Q8N0U8 176 aa12.42□□□□□ -0.42
COL7A1-203ENST00000459756 ADAD2Q8NCV1 583 aaKnown RBP12.42□□□□□ -0.42
COL7A1-203ENST00000459756 USMG5Q96IX5 58 aa12.42□□□□□ -0.42
COL7A1-203ENST00000459756 OR2A7Q96R45 310 aa12.42□□□□□ -0.42
COL7A1-203ENST00000459756 AIFM2Q9BRQ8 373 aa12.42□□□□□ -0.42
COL7A1-203ENST00000459756 SLIRPQ9GZT3 109 aaKnown RBP12.42□□□□□ -0.42
COL7A1-203ENST00000459756 RANGRFQ9HD47 186 aaPredicted RBP12.42□□□□□ -0.42
COL7A1-203ENST00000459756 EHFQ9NZC4 300 aa12.42□□□□□ -0.42
COL7A1-203ENST00000459756 ADAM30Q9UKF2 790 aa12.42□□□□□ -0.42
COL7A1-203ENST00000459756 COL7A1Q02388 2944 aa12.41□□□□□ -0.42
COL7A1-203ENST00000459756 RBFOX2O43251 390 aaKnown RBP eCLIP12.41□□□□□ -0.42
COL7A1-203ENST00000459756 KBTBD11O94819 623 aa12.41□□□□□ -0.42
COL7A1-203ENST00000459756 ZP3P21754 424 aa12.41□□□□□ -0.42
COL7A1-203ENST00000459756 CATR1Q13166 79 aa12.41□□□□□ -0.42
COL7A1-203ENST00000459756 DYRK1AQ13627 763 aa12.41□□□□□ -0.42
COL7A1-203ENST00000459756 DHRS11Q6UWP2 260 aa12.41□□□□□ -0.42
COL7A1-203ENST00000459756 TMEM17Q86X19 198 aa12.41□□□□□ -0.42
COL7A1-203ENST00000459756 PUSL1Q8N0Z8 303 aaKnown RBP12.41□□□□□ -0.42
COL7A1-203ENST00000459756 OR5H2Q8NGV7 314 aa12.41□□□□□ -0.42
COL7A1-203ENST00000459756 TMEM167AQ8TBQ9 72 aa12.41□□□□□ -0.42
COL7A1-203ENST00000459756 GPHA2Q96T91 129 aa12.41□□□□□ -0.42
COL7A1-203ENST00000459756 ZNF256Q9Y2P7 627 aaPredicted RBP12.41□□□□□ -0.42
COL7A1-203ENST00000459756 SAP30O75446 220 aa12.4□□□□□ -0.42
COL7A1-203ENST00000459756 MAS1LP35410 378 aa12.4□□□□□ -0.42
COL7A1-203ENST00000459756 RFX2P48378 723 aa12.4□□□□□ -0.42
COL7A1-203ENST00000459756 C10orf55Q5SWW7 151 aa12.4□□□□□ -0.42
COL7A1-203ENST00000459756 ACSM6Q6P461 480 aa12.4□□□□□ -0.42
COL7A1-203ENST00000459756 ZNF818PQ6ZRF7 136 aa12.4□□□□□ -0.42
COL7A1-203ENST00000459756 SPAG16Q8N0X2 631 aa12.4□□□□□ -0.42
COL7A1-203ENST00000459756 PRR25Q96S07 402 aa12.4□□□□□ -0.42
COL7A1-203ENST00000459756 B9D2Q9BPU9 175 aa12.4□□□□□ -0.42
COL7A1-203ENST00000459756 SCPEP1Q9HB40 452 aa12.4□□□□□ -0.42
COL7A1-203ENST00000459756 FAM223BA6NKX1 122 aa12.39□□□□□ -0.43
COL7A1-203ENST00000459756 ZNF701M0R085 212 aaPredicted RBP12.39□□□□□ -0.43
COL7A1-203ENST00000459756 SULT1C2O00338 296 aa12.39□□□□□ -0.43
COL7A1-203ENST00000459756 PMP2P02689 132 aa12.39□□□□□ -0.43
COL7A1-203ENST00000459756 CD69Q07108 199 aa12.39□□□□□ -0.43
COL7A1-203ENST00000459756 ZNF343Q6P1L6 599 aa12.39□□□□□ -0.43
COL7A1-203ENST00000459756 SLC25A42Q86VD7 318 aa12.39□□□□□ -0.43
COL7A1-203ENST00000459756 FAM223AQ8IWN6 122 aa12.39□□□□□ -0.43
COL7A1-203ENST00000459756 TTC9CQ8N5M4 171 aa12.39□□□□□ -0.43
COL7A1-203ENST00000459756 CD300LFQ8TDQ1 290 aa12.39□□□□□ -0.43
COL7A1-203ENST00000459756 GPX8Q8TED1 209 aa12.39□□□□□ -0.43
COL7A1-203ENST00000459756 MOB3AQ96BX8 217 aa12.39□□□□□ -0.43
COL7A1-203ENST00000459756 DIRAS2Q96HU8 199 aa12.39□□□□□ -0.43
COL7A1-203ENST00000459756 LSM4Q9Y4Z0 139 aaKnown RBP12.39□□□□□ -0.43
COL7A1-203ENST00000459756 ANKRD34BA5PLL1 514 aa12.38□□□□□ -0.43
COL7A1-203ENST00000459756 GNRHRP30968 328 aa12.38□□□□□ -0.43
COL7A1-203ENST00000459756 RPL27AP46776 148 aaKnown RBP12.38□□□□□ -0.43
COL7A1-203ENST00000459756 TAS2R31P59538 309 aa12.38□□□□□ -0.43
COL7A1-203ENST00000459756 RHOGP84095 191 aa12.38□□□□□ -0.43
COL7A1-203ENST00000459756 IL18Q14116 193 aa12.38□□□□□ -0.43
COL7A1-203ENST00000459756 AADACL3Q5VUY0 350 aa12.38□□□□□ -0.43
COL7A1-203ENST00000459756 LYSMD2Q8IV50 215 aa12.38□□□□□ -0.43
COL7A1-203ENST00000459756 OR6Q1Q8NGQ2 317 aa12.38□□□□□ -0.43
COL7A1-203ENST00000459756 OR6F1Q8NGZ6 308 aa12.38□□□□□ -0.43
COL7A1-203ENST00000459756 OR4A5Q8NH83 315 aa12.38□□□□□ -0.43
COL7A1-203ENST00000459756 DGCR14Q96DF8 476 aaKnown RBP12.38□□□□□ -0.43
COL7A1-203ENST00000459756 OR4C12Q96R67 309 aa12.38□□□□□ -0.43
COL7A1-203ENST00000459756 ZNF2Q9BSG1 426 aaPredicted RBP12.38□□□□□ -0.43
COL7A1-203ENST00000459756 ELOVL1Q9BW60 279 aa12.38□□□□□ -0.43
COL7A1-203ENST00000459756 BET1LQ9NYM9 111 aa12.38□□□□□ -0.43
COL7A1-203ENST00000459756 NDUFA13Q9P0J0 144 aa12.38□□□□□ -0.43
COL7A1-203ENST00000459756 PEF1Q9UBV8 284 aaKnown RBP12.38□□□□□ -0.43
COL7A1-203ENST00000459756 ZNF257Q9Y2Q1 563 aa12.38□□□□□ -0.43
COL7A1-203ENST00000459756 SORL1Q92673 2214 aa12.37□□□□□ -0.43
COL7A1-203ENST00000459756 TRBV9A0A0B4J1U6 114 aa12.37□□□□□ -0.43
COL7A1-203ENST00000459756 TEX22C9J3V5 150 aa12.37□□□□□ -0.43
COL7A1-203ENST00000459756 RBMXL2O75526 392 aaKnown RBP12.37□□□□□ -0.43
COL7A1-203ENST00000459756 LY86O95711 162 aa12.37□□□□□ -0.43
COL7A1-203ENST00000459756 HPRT1P00492 218 aa12.37□□□□□ -0.43
COL7A1-203ENST00000459756 ZNF735P0CB33 412 aa12.37□□□□□ -0.43
COL7A1-203ENST00000459756 HRH1P35367 487 aa12.37□□□□□ -0.43
COL7A1-203ENST00000459756 RPL8P62917 257 aaKnown RBP12.37□□□□□ -0.43
COL7A1-203ENST00000459756 DEFA5Q01523 94 aa12.37□□□□□ -0.43
COL7A1-203ENST00000459756 POU2AF1Q16633 256 aa12.37□□□□□ -0.43
COL7A1-203ENST00000459756 OR4A47Q6IF82 309 aa12.37□□□□□ -0.43
COL7A1-203ENST00000459756 SSX9Q7RTT3 188 aa12.37□□□□□ -0.43
COL7A1-203ENST00000459756 NECAP1Q8NC96 275 aa12.37□□□□□ -0.43
COL7A1-203ENST00000459756 OR51H1Q8NH63 302 aa12.37□□□□□ -0.43
COL7A1-203ENST00000459756 PLEKHA2Q9HB19 425 aa12.37□□□□□ -0.43
COL7A1-203ENST00000459756 AKIP1Q9NQ31 210 aa12.37□□□□□ -0.43
COL7A1-203ENST00000459756 DNAH9Q9NYC9 4486 aa12.36□□□□□ -0.43
COL7A1-203ENST00000459756 HMX3A6NHT5 357 aa12.36□□□□□ -0.43
COL7A1-203ENST00000459756 NPIPB5A8MRT5 1133 aa12.36□□□□□ -0.43
COL7A1-203ENST00000459756 PRH1P02810 166 aa12.36□□□□□ -0.43
COL7A1-203ENST00000459756 IL6RP08887 468 aaPredicted RBP12.36□□□□□ -0.43
COL7A1-203ENST00000459756 NQO2P16083 231 aa12.36□□□□□ -0.43
COL7A1-203ENST00000459756 HLA-GP17693 338 aa12.36□□□□□ -0.43
COL7A1-203ENST00000459756 HLA-DMAP28067 261 aa12.36□□□□□ -0.43
COL7A1-203ENST00000459756 RCVRNP35243 200 aa12.36□□□□□ -0.43
COL7A1-203ENST00000459756 ZNF45Q02386 682 aa12.36□□□□□ -0.43
COL7A1-203ENST00000459756 ATP5G2Q06055 141 aa12.36□□□□□ -0.43
COL7A1-203ENST00000459756 KLF5Q13887 457 aaPredicted RBP12.36□□□□□ -0.43
COL7A1-203ENST00000459756 CMTM1Q8IZ96 169 aa12.36□□□□□ -0.43
COL7A1-203ENST00000459756 FYTTD1Q96QD9 318 aaKnown RBP12.36□□□□□ -0.43
COL7A1-203ENST00000459756 ABHD1Q96SE0 405 aa12.36□□□□□ -0.43
COL7A1-203ENST00000459756 NXF2Q9GZY0 626 aaKnown RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms