RNA–Protein interactions for RNA: ENST00000458362.5

CRAT-207, Transcript of carnitine O-acetyltransferase, humanhuman

TSL 1 (best)

Gene CRAT, Length 2,253 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-207ENST00000458362 ERVK-16P61578 105 aa17.05■□□□□ 0.32
CRAT-207ENST00000458362 DUX4L9Q6RFH8 374 aaPredicted RBP17.05■□□□□ 0.32
CRAT-207ENST00000458362 ZNF474Q6S9Z5 364 aaPredicted RBP17.05■□□□□ 0.32
CRAT-207ENST00000458362 TGIF2LYQ8IUE0 185 aa17.05■□□□□ 0.32
CRAT-207ENST00000458362 RPRMLQ8N4K4 120 aa17.05■□□□□ 0.32
CRAT-207ENST00000458362 OR52E5Q8NH55 327 aa17.05■□□□□ 0.32
CRAT-207ENST00000458362 PPP1R35Q8TAP8 253 aa17.05■□□□□ 0.32
CRAT-207ENST00000458362 ITLN1Q8WWA0 313 aa17.05■□□□□ 0.32
CRAT-207ENST00000458362 DERL1Q9BUN8 251 aa17.05■□□□□ 0.32
CRAT-207ENST00000458362 AURKAIP1Q9NWT8 199 aaPredicted RBP17.05■□□□□ 0.32
CRAT-207ENST00000458362 A0A1W2PPQ1 181 aa17.04■□□□□ 0.32
CRAT-207ENST00000458362 LHBP01229 141 aa17.04■□□□□ 0.32
CRAT-207ENST00000458362 C17orf58Q2M2W7 97 aa17.04■□□□□ 0.32
CRAT-207ENST00000458362 ANAPC16Q96DE5 110 aa17.04■□□□□ 0.32
CRAT-207ENST00000458362 C1orf159Q96HA4 380 aa17.04■□□□□ 0.32
CRAT-207ENST00000458362 DSCAML1Q8TD84 2053 aa17.04■□□□□ 0.32
CRAT-207ENST00000458362 VENTXO95231 258 aa17.04■□□□□ 0.32
CRAT-207ENST00000458362 OPRK1P41145 380 aa17.04■□□□□ 0.32
CRAT-207ENST00000458362 PDLIM3Q53GG5 364 aaPredicted RBP17.04■□□□□ 0.32
CRAT-207ENST00000458362 CST9LP1Q5W188 147 aa17.04■□□□□ 0.32
CRAT-207ENST00000458362 MIC13Q5XKP0 118 aa17.04■□□□□ 0.32
CRAT-207ENST00000458362 PACRGQ96M98 296 aaPredicted RBP17.04■□□□□ 0.32
CRAT-207ENST00000458362 GGTLC1Q9BX51 225 aa17.04■□□□□ 0.32
CRAT-207ENST00000458362 TCF19Q9Y242 345 aa17.04■□□□□ 0.32
CRAT-207ENST00000458362 ASPMQ8IZT6 3477 aa17.04■□□□□ 0.32
CRAT-207ENST00000458362 A0A1W2PPV4 95 aa17.03■□□□□ 0.32
CRAT-207ENST00000458362 CHRNA7P36544 502 aa17.03■□□□□ 0.32
CRAT-207ENST00000458362 RPP30P78346 268 aaKnown RBP17.03■□□□□ 0.32
CRAT-207ENST00000458362 CT45A1Q5HYN5 189 aa17.03■□□□□ 0.32
CRAT-207ENST00000458362 CT45A3Q8NHU0 189 aa17.03■□□□□ 0.32
CRAT-207ENST00000458362 RAB1CQ92928 201 aa17.03■□□□□ 0.32
CRAT-207ENST00000458362 GFOD1Q9NXC2 390 aa17.03■□□□□ 0.32
CRAT-207ENST00000458362 ZNF729A6NN14 1252 aaPredicted RBP17.03■□□□□ 0.32
CRAT-207ENST00000458362 PPP5D1E7EU14 171 aa17.03■□□□□ 0.32
CRAT-207ENST00000458362 HIST1H1BP16401 226 aaKnown RBP17.03■□□□□ 0.32
CRAT-207ENST00000458362 COL8A2P25067 703 aa17.03■□□□□ 0.32
CRAT-207ENST00000458362 KLF3P57682 345 aaPredicted RBP17.03■□□□□ 0.32
CRAT-207ENST00000458362 TMEM249Q2WGJ8 235 aa17.03■□□□□ 0.32
CRAT-207ENST00000458362 TMEM183AQ8IXX5 376 aa17.03■□□□□ 0.32
CRAT-207ENST00000458362 SDSLQ96GA7 329 aa17.03■□□□□ 0.32
CRAT-207ENST00000458362 PFDN5Q99471 154 aa17.03■□□□□ 0.32
CRAT-207ENST00000458362 PXMP4Q9Y6I8 212 aa17.03■□□□□ 0.32
CRAT-207ENST00000458362 GGCTO75223 188 aaKnown RBP17.02■□□□□ 0.32
CRAT-207ENST00000458362 MPDU1O75352 247 aa17.02■□□□□ 0.32
CRAT-207ENST00000458362 CEACAM4O75871 244 aa17.02■□□□□ 0.32
CRAT-207ENST00000458362 NDUFB4O95168 129 aa17.02■□□□□ 0.32
CRAT-207ENST00000458362 LY86O95711 162 aa17.02■□□□□ 0.32
CRAT-207ENST00000458362 ARL14EPLP0DKL9 152 aa17.02■□□□□ 0.32
CRAT-207ENST00000458362 LINC01551Q86U37 167 aa17.02■□□□□ 0.32
CRAT-207ENST00000458362 OR2T10Q8NGZ9 312 aa17.02■□□□□ 0.32
CRAT-207ENST00000458362 RAI1Q7Z5J4 1906 aaPredicted RBP17.02■□□□□ 0.32
CRAT-207ENST00000458362 TMPRSS3P57727 454 aa17.01■□□□□ 0.31
CRAT-207ENST00000458362 GAMTQ14353 236 aa17.01■□□□□ 0.31
CRAT-207ENST00000458362 IGF2-ASQ6U949 168 aa17.01■□□□□ 0.31
CRAT-207ENST00000458362 ZNF114Q8NC26 417 aa17.01■□□□□ 0.31
CRAT-207ENST00000458362 OR1P1Q8NH06 330 aa17.01■□□□□ 0.31
CRAT-207ENST00000458362 FAM216AQ8WUB2 273 aa17.01■□□□□ 0.31
CRAT-207ENST00000458362 FAM215AQ9Y5M1 114 aa17.01■□□□□ 0.31
CRAT-207ENST00000458362 PDE6DO43924 150 aa17.01■□□□□ 0.31
CRAT-207ENST00000458362 KCNIP2Q9NS61 270 aa17.01■□□□□ 0.31
CRAT-207ENST00000458362 TANC2Q9HCD6 1990 aa17.01■□□□□ 0.31
CRAT-207ENST00000458362 CFAP47Q6ZTR5 3102 aa17.01■□□□□ 0.31
CRAT-207ENST00000458362 SAA2-SAA4A0A096LPE2 208 aa17■□□□□ 0.31
CRAT-207ENST00000458362 PGPEP1LA6NFU8 196 aa17■□□□□ 0.31
CRAT-207ENST00000458362 SAA2P0DJI9 122 aaPredicted RBP17■□□□□ 0.31
CRAT-207ENST00000458362 KIR2DS2P43631 304 aa17■□□□□ 0.31
CRAT-207ENST00000458362 PRSS8Q16651 343 aa17■□□□□ 0.31
CRAT-207ENST00000458362 TIMM23BQ5SRD1 257 aa17■□□□□ 0.31
CRAT-207ENST00000458362 OR4S2Q8NH73 311 aa17■□□□□ 0.31
CRAT-207ENST00000458362 SSMEM1Q8WWF3 244 aa17■□□□□ 0.31
CRAT-207ENST00000458362 TMEM204Q9BSN7 226 aa17■□□□□ 0.31
CRAT-207ENST00000458362 C15orf61A6NNL5 157 aa17■□□□□ 0.31
CRAT-207ENST00000458362 AMBPP02760 352 aa17■□□□□ 0.31
CRAT-207ENST00000458362 MYOD1P15172 320 aa17■□□□□ 0.31
CRAT-207ENST00000458362 GLRXP35754 106 aa17■□□□□ 0.31
CRAT-207ENST00000458362 SRP14P37108 136 aaKnown RBP17■□□□□ 0.31
CRAT-207ENST00000458362 XKRY2A2RUG3 117 aa16.99■□□□□ 0.31
CRAT-207ENST00000458362 C1QTNF9P0C862 333 aa16.99■□□□□ 0.31
CRAT-207ENST00000458362 FAM3BP58499 235 aaPredicted RBP16.99■□□□□ 0.31
CRAT-207ENST00000458362 ARSJQ5FYB0 599 aaPredicted RBP16.99■□□□□ 0.31
CRAT-207ENST00000458362 ACTL10Q5JWF8 245 aa16.99■□□□□ 0.31
CRAT-207ENST00000458362 TCF23Q7RTU1 214 aa16.99■□□□□ 0.31
CRAT-207ENST00000458362 LSM4Q9Y4Z0 139 aaKnown RBP16.99■□□□□ 0.31
CRAT-207ENST00000458362 TRGV8A0A0C4DH27 118 aa16.99■□□□□ 0.31
CRAT-207ENST00000458362 TMPRSS2O15393 492 aa16.99■□□□□ 0.31
CRAT-207ENST00000458362 STAG3L2P0CL84 134 aa16.99■□□□□ 0.31
CRAT-207ENST00000458362 STAG3L3P0CL85 134 aa16.99■□□□□ 0.31
CRAT-207ENST00000458362 OR4A47Q6IF82 309 aa16.99■□□□□ 0.31
CRAT-207ENST00000458362 LURAP1LQ8IV03 231 aa16.99■□□□□ 0.31
CRAT-207ENST00000458362 ZADH2Q8N4Q0 377 aa16.99■□□□□ 0.31
CRAT-207ENST00000458362 TMEM37Q8WXS4 190 aa16.99■□□□□ 0.31
CRAT-207ENST00000458362 RHOVQ96L33 236 aa16.99■□□□□ 0.31
CRAT-207ENST00000458362 FUT9Q9Y231 359 aa16.99■□□□□ 0.31
CRAT-207ENST00000458362 ICE1Q9Y2F5 2266 aa16.98■□□□□ 0.31
CRAT-207ENST00000458362 KBTBD11-OT1A0A1B0GTJ5 212 aa16.98■□□□□ 0.31
CRAT-207ENST00000458362 RAB7AP51149 207 aa16.98■□□□□ 0.31
CRAT-207ENST00000458362 FAM78BQ5VT40 261 aa16.98■□□□□ 0.31
CRAT-207ENST00000458362 FAM222BQ8WU58 562 aa16.98■□□□□ 0.31
CRAT-207ENST00000458362 TRBV20OR9-2A0A075B6H5 130 aa16.98■□□□□ 0.31
CRAT-207ENST00000458362 IGLV3-9A0A075B6K5 115 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms