RNA–Protein interactions for RNA: ENST00000458059.7

CNEP1R1-203, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,965 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-203ENST00000458059 FOXH1O75593 365 aa16.24■□□□□ 0.19
CNEP1R1-203ENST00000458059 CECR9P0C854 216 aa16.24■□□□□ 0.19
CNEP1R1-203ENST00000458059 ZNF705DP0CH99 300 aaPredicted RBP16.24■□□□□ 0.19
CNEP1R1-203ENST00000458059 ZNF705BP0CI00 300 aaPredicted RBP16.24■□□□□ 0.19
CNEP1R1-203ENST00000458059 ZNF134P52741 427 aa16.24■□□□□ 0.19
CNEP1R1-203ENST00000458059 ADGRG4Q8IZF6 3080 aa16.24■□□□□ 0.19
CNEP1R1-203ENST00000458059 ZBTB34Q8NCN2 500 aa16.23■□□□□ 0.19
CNEP1R1-203ENST00000458059 MGST2Q99735 147 aa16.23■□□□□ 0.19
CNEP1R1-203ENST00000458059 WDR83OSQ9Y284 106 aa16.23■□□□□ 0.19
CNEP1R1-203ENST00000458059 MDFIC2A0A1B0GVS7 189 aa16.23■□□□□ 0.19
CNEP1R1-203ENST00000458059 DUTP33316 252 aaKnown RBP16.23■□□□□ 0.19
CNEP1R1-203ENST00000458059 SLC35B1P78383 322 aa16.23■□□□□ 0.19
CNEP1R1-203ENST00000458059 HES3Q5TGS1 186 aa16.23■□□□□ 0.19
CNEP1R1-203ENST00000458059 C1orf229Q6ZS94 237 aaPredicted RBP16.23■□□□□ 0.19
CNEP1R1-203ENST00000458059 CXXC4Q9H2H0 198 aa16.23■□□□□ 0.19
CNEP1R1-203ENST00000458059 HES4Q9HCC6 221 aa16.23■□□□□ 0.19
CNEP1R1-203ENST00000458059 SEPSECSQ9HD40 501 aaKnown RBP16.23■□□□□ 0.19
CNEP1R1-203ENST00000458059 COLQQ9Y215 455 aaPredicted RBP16.23■□□□□ 0.19
CNEP1R1-203ENST00000458059 G0S2P27469 103 aa16.23■□□□□ 0.19
CNEP1R1-203ENST00000458059 PRDX2P32119 198 aa16.23■□□□□ 0.19
CNEP1R1-203ENST00000458059 HLA-DRB5Q30154 266 aa16.23■□□□□ 0.19
CNEP1R1-203ENST00000458059 OCC1Q8TAD7 63 aa16.23■□□□□ 0.19
CNEP1R1-203ENST00000458059 GMPPAQ96IJ6 420 aaPredicted RBP16.23■□□□□ 0.19
CNEP1R1-203ENST00000458059 C21orf140B9A014 251 aa16.22■□□□□ 0.19
CNEP1R1-203ENST00000458059 KITLGP21583 273 aa16.22■□□□□ 0.19
CNEP1R1-203ENST00000458059 ADMP35318 185 aa16.22■□□□□ 0.19
CNEP1R1-203ENST00000458059 SMIM21Q3B7S5 101 aa16.22■□□□□ 0.19
CNEP1R1-203ENST00000458059 SFRP2Q96HF1 295 aa16.22■□□□□ 0.19
CNEP1R1-203ENST00000458059 YTHDF2Q9Y5A9 579 aaKnown RBP16.22■□□□□ 0.19
CNEP1R1-203ENST00000458059 COL27A1Q8IZC6 1860 aaPredicted RBP16.22■□□□□ 0.19
CNEP1R1-203ENST00000458059 HSD17B10Q99714 261 aaKnown RBP16.22■□□□□ 0.19
CNEP1R1-203ENST00000458059 NKX2-8O15522 239 aa16.21■□□□□ 0.19
CNEP1R1-203ENST00000458059 OR5I1Q13606 314 aa16.21■□□□□ 0.19
CNEP1R1-203ENST00000458059 FAM214BQ7L5A3 538 aa16.21■□□□□ 0.19
CNEP1R1-203ENST00000458059 MOB3BQ86TA1 216 aa16.21■□□□□ 0.19
CNEP1R1-203ENST00000458059 CISD2Q8N5K1 135 aaKnown RBP16.21■□□□□ 0.19
CNEP1R1-203ENST00000458059 DEFB108BQ8NET1 73 aa16.21■□□□□ 0.19
CNEP1R1-203ENST00000458059 ACY3Q96HD9 319 aa16.21■□□□□ 0.19
CNEP1R1-203ENST00000458059 FER1L6-AS2Q96M78 137 aa16.21■□□□□ 0.19
CNEP1R1-203ENST00000458059 MRPL37Q9BZE1 423 aaKnown RBP16.21■□□□□ 0.19
CNEP1R1-203ENST00000458059 ZDHHC11Q9H8X9 412 aa16.21■□□□□ 0.19
CNEP1R1-203ENST00000458059 FKBP11Q9NYL4 201 aa16.21■□□□□ 0.19
CNEP1R1-203ENST00000458059 TMEM210A6NLX4 147 aa16.21■□□□□ 0.19
CNEP1R1-203ENST00000458059 DUX4L9Q6RFH8 374 aaPredicted RBP16.21■□□□□ 0.19
CNEP1R1-203ENST00000458059 C9orf106Q8NAJ2 232 aa16.21■□□□□ 0.19
CNEP1R1-203ENST00000458059 RNASEH2CQ8TDP1 164 aaKnown RBP16.21■□□□□ 0.19
CNEP1R1-203ENST00000458059 OPN3Q9H1Y3 402 aaPredicted RBP16.21■□□□□ 0.19
CNEP1R1-203ENST00000458059 ZNRD1Q9P1U0 126 aa16.21■□□□□ 0.19
CNEP1R1-203ENST00000458059 PLXNB1O43157 2135 aa16.21■□□□□ 0.19
CNEP1R1-203ENST00000458059 GATA2P23769 480 aaPredicted RBP16.2■□□□□ 0.18
CNEP1R1-203ENST00000458059 SRP14P37108 136 aaKnown RBP16.2■□□□□ 0.18
CNEP1R1-203ENST00000458059 GBGT1Q8N5D6 347 aa16.2■□□□□ 0.18
CNEP1R1-203ENST00000458059 GGTLC1Q9BX51 225 aa16.2■□□□□ 0.18
CNEP1R1-203ENST00000458059 TMEM140Q9NV12 185 aa16.2■□□□□ 0.18
CNEP1R1-203ENST00000458059 ZNF90Q03938 601 aa16.2■□□□□ 0.18
CNEP1R1-203ENST00000458059 ATMQ13315 3056 aa16.2■□□□□ 0.18
CNEP1R1-203ENST00000458059 PTPRBP23467 1997 aa16.2■□□□□ 0.18
CNEP1R1-203ENST00000458059 PIEZO2Q9H5I5 2752 aa16.2■□□□□ 0.18
CNEP1R1-203ENST00000458059 F2Z2F3 143 aa16.2■□□□□ 0.18
CNEP1R1-203ENST00000458059 C15orf65H3BRN8 121 aa16.2■□□□□ 0.18
CNEP1R1-203ENST00000458059 TAS2R60P59551 318 aa16.2■□□□□ 0.18
CNEP1R1-203ENST00000458059 ERVK-16P61578 105 aa16.2■□□□□ 0.18
CNEP1R1-203ENST00000458059 WDR31Q8NA23 367 aa16.2■□□□□ 0.18
CNEP1R1-203ENST00000458059 MS4A10Q96PG2 267 aa16.2■□□□□ 0.18
CNEP1R1-203ENST00000458059 GNG10P50151 68 aa16.19■□□□□ 0.18
CNEP1R1-203ENST00000458059 RPL31P62899 125 aaKnown RBP16.19■□□□□ 0.18
CNEP1R1-203ENST00000458059 MSMPQ1L6U9 139 aa16.19■□□□□ 0.18
CNEP1R1-203ENST00000458059 TDRG1Q3Y452 100 aa16.19■□□□□ 0.18
CNEP1R1-203ENST00000458059 CYB5R2Q6BCY4 276 aa16.19■□□□□ 0.18
CNEP1R1-203ENST00000458059 LURAP1Q96LR2 239 aa16.19■□□□□ 0.18
CNEP1R1-203ENST00000458059 NDUFAF3Q9BU61 184 aa16.19■□□□□ 0.18
CNEP1R1-203ENST00000458059 DSCAMO60469 2012 aa16.19■□□□□ 0.18
CNEP1R1-203ENST00000458059 IGKV1D-17A0A075B6S4 117 aa16.19■□□□□ 0.18
CNEP1R1-203ENST00000458059 PDE6DO43924 150 aa16.19■□□□□ 0.18
CNEP1R1-203ENST00000458059 VENTXO95231 258 aa16.19■□□□□ 0.18
CNEP1R1-203ENST00000458059 RPL15P61313 204 aaKnown RBP16.19■□□□□ 0.18
CNEP1R1-203ENST00000458059 VWC2Q2TAL6 325 aa16.19■□□□□ 0.18
CNEP1R1-203ENST00000458059 MORN2Q502X0 79 aa16.19■□□□□ 0.18
CNEP1R1-203ENST00000458059 Q6ZT83 130 aa16.19■□□□□ 0.18
CNEP1R1-203ENST00000458059 OR4P4Q8NGL7 312 aa16.19■□□□□ 0.18
CNEP1R1-203ENST00000458059 SPRY3O43610 288 aa16.18■□□□□ 0.18
CNEP1R1-203ENST00000458059 GCGP01275 180 aa16.18■□□□□ 0.18
CNEP1R1-203ENST00000458059 CD59P13987 128 aa16.18■□□□□ 0.18
CNEP1R1-203ENST00000458059 RPL29P47914 159 aaKnown RBP16.18■□□□□ 0.18
CNEP1R1-203ENST00000458059 COA6Q5JTJ3 125 aaKnown RBP16.18■□□□□ 0.18
CNEP1R1-203ENST00000458059 FAM216AQ8WUB2 273 aa16.18■□□□□ 0.18
CNEP1R1-203ENST00000458059 S1PR3Q99500 378 aa16.18■□□□□ 0.18
CNEP1R1-203ENST00000458059 ELOVL5Q9NYP7 299 aa16.18■□□□□ 0.18
CNEP1R1-203ENST00000458059 GFRA3O60609 400 aa16.18■□□□□ 0.18
CNEP1R1-203ENST00000458059 TIMP3P35625 211 aa16.18■□□□□ 0.18
CNEP1R1-203ENST00000458059 INO80CQ6PI98 192 aaPredicted RBP16.18■□□□□ 0.18
CNEP1R1-203ENST00000458059 AHRRA9YTQ3 701 aa16.17■□□□□ 0.18
CNEP1R1-203ENST00000458059 MKRN2OSH3BPM6 223 aa16.17■□□□□ 0.18
CNEP1R1-203ENST00000458059 KIR2DL2P43627 348 aaPredicted RBP16.17■□□□□ 0.18
CNEP1R1-203ENST00000458059 ZNF83P51522 516 aa16.17■□□□□ 0.18
CNEP1R1-203ENST00000458059 TCL1AP56279 114 aa16.17■□□□□ 0.18
CNEP1R1-203ENST00000458059 MOGAT3Q86VF5 341 aa16.17■□□□□ 0.18
CNEP1R1-203ENST00000458059 GUCD1Q96NT3 240 aa16.17■□□□□ 0.18
CNEP1R1-203ENST00000458059 KCNIP2Q9NS61 270 aa16.17■□□□□ 0.18
CNEP1R1-203ENST00000458059 TCF19Q9Y242 345 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms