RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 MFFQ9GZY8 342 aa4.2□□□□□ -1.74
HMGB1P4-201ENST00000455362 RAB1BQ9H0U4 201 aa4.2□□□□□ -1.74
HMGB1P4-201ENST00000455362 MMP28Q9H239 520 aa4.2□□□□□ -1.74
HMGB1P4-201ENST00000455362 PPA2Q9H2U2 334 aa4.2□□□□□ -1.74
HMGB1P4-201ENST00000455362 RANBP3Q9H6Z4 567 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P4-201ENST00000455362 PLEKHF2Q9H8W4 249 aa4.2□□□□□ -1.74
HMGB1P4-201ENST00000455362 C12orf4Q9NQ89 552 aa4.2□□□□□ -1.74
HMGB1P4-201ENST00000455362 TMEM106BQ9NUM4 274 aa4.2□□□□□ -1.74
HMGB1P4-201ENST00000455362 MCUBQ9NWR8 336 aa4.2□□□□□ -1.74
HMGB1P4-201ENST00000455362 ANXA10Q9UJ72 324 aa4.2□□□□□ -1.74
HMGB1P4-201ENST00000455362 FBN2P35556 2912 aa4.2□□□□□ -1.74
HMGB1P4-201ENST00000455362 IGLV5-52A0A0A0MRZ9 124 aa4.19□□□□□ -1.74
HMGB1P4-201ENST00000455362 IGLV9-49A0A0B4J1Y8 123 aa4.19□□□□□ -1.74
HMGB1P4-201ENST00000455362 TRAV38-1A0A0B4J264 116 aa4.19□□□□□ -1.74
HMGB1P4-201ENST00000455362 IGLV5-39A0A0G2JS06 123 aa4.19□□□□□ -1.74
HMGB1P4-201ENST00000455362 RAB19A4D1S5 217 aa4.19□□□□□ -1.74
HMGB1P4-201ENST00000455362 TRDCB7Z8K6 153 aa4.19□□□□□ -1.74
HMGB1P4-201ENST00000455362 DISC1C4P0D8 188 aa4.19□□□□□ -1.74
HMGB1P4-201ENST00000455362 LYNX1G3V0Z9 82 aa4.19□□□□□ -1.74
HMGB1P4-201ENST00000455362 SDCBPO00560 298 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P4-201ENST00000455362 RAMP3O60896 148 aa4.19□□□□□ -1.74
HMGB1P4-201ENST00000455362 RP2O75695 350 aa4.19□□□□□ -1.74
HMGB1P4-201ENST00000455362 ATP5LO75964 103 aa4.19□□□□□ -1.74
HMGB1P4-201ENST00000455362 NDUFB6O95139 128 aa4.19□□□□□ -1.74
HMGB1P4-201ENST00000455362 FSTL3O95633 263 aa4.19□□□□□ -1.74
HMGB1P4-201ENST00000455362 CRYZL1O95825 349 aa4.19□□□□□ -1.74
HMGB1P4-201ENST00000455362 GYPAP02724 150 aa4.19□□□□□ -1.74
HMGB1P4-201ENST00000455362 GAPDHP04406 335 aaKnown RBP4.19□□□□□ -1.74
HMGB1P4-201ENST00000455362 TCRBP04435 133 aa4.19□□□□□ -1.74
HMGB1P4-201ENST00000455362 IFNA6P05013 189 aa4.19□□□□□ -1.74
HMGB1P4-201ENST00000455362 LYNX1P0DP58 116 aa4.19□□□□□ -1.74
HMGB1P4-201ENST00000455362 COX6B1P14854 86 aa4.19□□□□□ -1.74
HMGB1P4-201ENST00000455362 RPL35AP18077 110 aaKnown RBP4.19□□□□□ -1.74
HMGB1P4-201ENST00000455362 RCC1P18754 421 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P4-201ENST00000455362 ID1P41134 155 aa4.19□□□□□ -1.74
HMGB1P4-201ENST00000455362 KCNJ3P48549 501 aa4.19□□□□□ -1.74
HMGB1P4-201ENST00000455362 TAS2R46P59540 309 aa4.19□□□□□ -1.74
HMGB1P4-201ENST00000455362 MRPS11P82912 194 aaKnown RBP4.19□□□□□ -1.74
HMGB1P4-201ENST00000455362 AESQ08117 197 aa4.19□□□□□ -1.74
HMGB1P4-201ENST00000455362 SRSF9Q13242 221 aaKnown RBP eCLIP4.19□□□□□ -1.74
HMGB1P4-201ENST00000455362 CDK10Q15131 360 aa4.19□□□□□ -1.74
HMGB1P4-201ENST00000455362 GRK1Q15835 563 aa4.19□□□□□ -1.74
HMGB1P4-201ENST00000455362 CHRFAM7AQ494W8 412 aa4.19□□□□□ -1.74
HMGB1P4-201ENST00000455362 ACTBL2Q562R1 376 aa4.19□□□□□ -1.74
HMGB1P4-201ENST00000455362 RNASE10Q5GAN6 216 aaKnown RBP4.19□□□□□ -1.74
HMGB1P4-201ENST00000455362 VAX1Q5SQQ9 334 aa4.19□□□□□ -1.74
HMGB1P4-201ENST00000455362 RSBN1Q5VWQ0 802 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P4-201ENST00000455362 SLC35E4Q6ICL7 350 aa4.19□□□□□ -1.74
HMGB1P4-201ENST00000455362 PLET1Q6UQ28 207 aa4.19□□□□□ -1.74
HMGB1P4-201ENST00000455362 ZNF788Q6ZQV5 615 aa4.19□□□□□ -1.74
HMGB1P4-201ENST00000455362 ZNF561Q8N587 486 aa4.19□□□□□ -1.74
HMGB1P4-201ENST00000455362 OR51S1Q8NGJ8 323 aa4.19□□□□□ -1.74
HMGB1P4-201ENST00000455362 OR1B1Q8NGR6 318 aa4.19□□□□□ -1.74
HMGB1P4-201ENST00000455362 OR5H2Q8NGV7 314 aa4.19□□□□□ -1.74
HMGB1P4-201ENST00000455362 TERB2Q8NHR7 220 aa4.19□□□□□ -1.74
HMGB1P4-201ENST00000455362 MRPL30Q8TCC3 161 aaKnown RBP4.19□□□□□ -1.74
HMGB1P4-201ENST00000455362 CREB3L1Q96BA8 519 aa4.19□□□□□ -1.74
HMGB1P4-201ENST00000455362 CLCC1Q96S66 551 aa4.19□□□□□ -1.74
HMGB1P4-201ENST00000455362 CCL13Q99616 98 aa4.19□□□□□ -1.74
HMGB1P4-201ENST00000455362 ZNF286AQ9HBT8 521 aa4.19□□□□□ -1.74
HMGB1P4-201ENST00000455362 COPZ2Q9P299 210 aa4.19□□□□□ -1.74
HMGB1P4-201ENST00000455362 KIF25Q9UIL4 384 aa4.19□□□□□ -1.74
HMGB1P4-201ENST00000455362 SCP2D1Q9UJQ7 156 aa4.19□□□□□ -1.74
HMGB1P4-201ENST00000455362 ZNF221Q9UK13 617 aa4.19□□□□□ -1.74
HMGB1P4-201ENST00000455362 NUP50Q9UKX7 468 aa4.19□□□□□ -1.74
HMGB1P4-201ENST00000455362 GAB2Q9UQC2 676 aa4.19□□□□□ -1.74
HMGB1P4-201ENST00000455362 NUBP2Q9Y5Y2 271 aa4.19□□□□□ -1.74
HMGB1P4-201ENST00000455362 FLNBO75369 2602 aaKnown RBP4.19□□□□□ -1.74
HMGB1P4-201ENST00000455362 NBPF19A0A087WUL8 3843 aa4.19□□□□□ -1.74
HMGB1P4-201ENST00000455362 CREBBPQ92793 2442 aa4.19□□□□□ -1.74
HMGB1P4-201ENST00000455362 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.18□□□□□ -1.74
HMGB1P4-201ENST00000455362 ZANQ9Y493 2812 aa4.18□□□□□ -1.74
HMGB1P4-201ENST00000455362 IGLV5-37A0A075B6J1 123 aa4.18□□□□□ -1.74
HMGB1P4-201ENST00000455362 TRAV39A0A0B4J263 110 aa4.18□□□□□ -1.74
HMGB1P4-201ENST00000455362 IGKV1-6A0A0C4DH72 117 aa4.18□□□□□ -1.74
HMGB1P4-201ENST00000455362 KIR2DS1A0A191URI9 304 aa4.18□□□□□ -1.74
HMGB1P4-201ENST00000455362 A0A1B0GW55 424 aa4.18□□□□□ -1.74
HMGB1P4-201ENST00000455362 TMEM30CPA0ZSE6 113 aa4.18□□□□□ -1.74
HMGB1P4-201ENST00000455362 INMT-MINDY4F8WBC2 141 aa4.18□□□□□ -1.74
HMGB1P4-201ENST00000455362 FABP7O15540 132 aa4.18□□□□□ -1.74
HMGB1P4-201ENST00000455362 PPIHO43447 177 aaKnown RBP4.18□□□□□ -1.74
HMGB1P4-201ENST00000455362 LY6HO94772 140 aa4.18□□□□□ -1.74
HMGB1P4-201ENST00000455362 TMEM50AO95807 157 aa4.18□□□□□ -1.74
HMGB1P4-201ENST00000455362 CSN2P05814 226 aa4.18□□□□□ -1.74
HMGB1P4-201ENST00000455362 SCTP09683 121 aa4.18□□□□□ -1.74
HMGB1P4-201ENST00000455362 DUX4L2P0CJ85 424 aa4.18□□□□□ -1.74
HMGB1P4-201ENST00000455362 DUX4L3P0CJ86 424 aa4.18□□□□□ -1.74
HMGB1P4-201ENST00000455362 DUX4L4P0CJ87 422 aa4.18□□□□□ -1.74
HMGB1P4-201ENST00000455362 DUX4L5P0CJ88 424 aa4.18□□□□□ -1.74
HMGB1P4-201ENST00000455362 DUX4L6P0CJ89 424 aa4.18□□□□□ -1.74
HMGB1P4-201ENST00000455362 DUX4L7P0CJ90 424 aa4.18□□□□□ -1.74
HMGB1P4-201ENST00000455362 OR5H8P0DN80 308 aa4.18□□□□□ -1.74
HMGB1P4-201ENST00000455362 DAOP14920 347 aa4.18□□□□□ -1.74
HMGB1P4-201ENST00000455362 GZMHP20718 246 aa4.18□□□□□ -1.74
HMGB1P4-201ENST00000455362 C4BPBP20851 252 aa4.18□□□□□ -1.74
HMGB1P4-201ENST00000455362 KIR2DS4P43632 304 aa4.18□□□□□ -1.74
HMGB1P4-201ENST00000455362 EFNA4P52798 201 aa4.18□□□□□ -1.74
HMGB1P4-201ENST00000455362 TMEM33P57088 247 aa4.18□□□□□ -1.74
HMGB1P4-201ENST00000455362 TSPAN5P62079 268 aa4.18□□□□□ -1.74
HMGB1P4-201ENST00000455362 KIR2DS1Q14954 304 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms