RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 CRYGBP07316 175 aa6.89□□□□□ -1.31
COL28A1-205ENST00000453441 ANXA3P12429 323 aa6.89□□□□□ -1.31
COL28A1-205ENST00000453441 MDKP21741 143 aaPredicted RBP6.89□□□□□ -1.31
COL28A1-205ENST00000453441 UBE2MP61081 183 aaKnown RBP6.89□□□□□ -1.31
COL28A1-205ENST00000453441 SRPXP78539 464 aa6.89□□□□□ -1.31
COL28A1-205ENST00000453441 DHODHQ02127 395 aa6.89□□□□□ -1.31
COL28A1-205ENST00000453441 TMEM267Q0VDI3 215 aaPredicted RBP6.89□□□□□ -1.31
COL28A1-205ENST00000453441 FBLN7Q53RD9 439 aa6.89□□□□□ -1.31
COL28A1-205ENST00000453441 C9orf152Q5JTZ5 239 aa6.89□□□□□ -1.31
COL28A1-205ENST00000453441 FAAP20Q6NZ36 180 aa6.89□□□□□ -1.31
COL28A1-205ENST00000453441 MZT2BQ6NZ67 158 aa6.89□□□□□ -1.31
COL28A1-205ENST00000453441 ZNF562Q6V9R5 426 aa6.89□□□□□ -1.31
COL28A1-205ENST00000453441 SGPP2Q8IWX5 399 aa6.89□□□□□ -1.31
COL28A1-205ENST00000453441 MMD2Q8IY49 270 aa6.89□□□□□ -1.31
COL28A1-205ENST00000453441 C3orf56Q8N813 242 aa6.89□□□□□ -1.31
COL28A1-205ENST00000453441 MRGPRFQ96AM1 343 aa6.89□□□□□ -1.31
COL28A1-205ENST00000453441 TMEM68Q96MH6 324 aa6.89□□□□□ -1.31
COL28A1-205ENST00000453441 OR2A7Q96R45 310 aa6.89□□□□□ -1.31
COL28A1-205ENST00000453441 ZNF747Q9BV97 191 aa6.89□□□□□ -1.31
COL28A1-205ENST00000453441 OR51J1Q9H342 316 aa6.89□□□□□ -1.31
COL28A1-205ENST00000453441 FBXL15Q9H469 300 aa6.89□□□□□ -1.31
COL28A1-205ENST00000453441 SERTAD4Q9NUC0 356 aa6.89□□□□□ -1.31
COL28A1-205ENST00000453441 BET1LQ9NYM9 111 aa6.89□□□□□ -1.31
COL28A1-205ENST00000453441 KCNIP3Q9Y2W7 256 aa6.89□□□□□ -1.31
COL28A1-205ENST00000453441 SIGLEC9Q9Y336 463 aa6.89□□□□□ -1.31
COL28A1-205ENST00000453441 STAB1Q9NY15 2570 aa6.89□□□□□ -1.31
COL28A1-205ENST00000453441 FBN1P35555 2871 aaKnown RBP6.88□□□□□ -1.31
COL28A1-205ENST00000453441 TEX13DA0A0J9YY54 714 aaPredicted RBP6.88□□□□□ -1.31
COL28A1-205ENST00000453441 C3orf85A0A1B0GTC6 90 aa6.88□□□□□ -1.31
COL28A1-205ENST00000453441 CRYM-AS1A6NIL9 109 aa6.88□□□□□ -1.31
COL28A1-205ENST00000453441 LYRM1O43325 122 aa6.88□□□□□ -1.31
COL28A1-205ENST00000453441 UPK1BO75841 260 aa6.88□□□□□ -1.31
COL28A1-205ENST00000453441 KBTBD11O94819 623 aa6.88□□□□□ -1.31
COL28A1-205ENST00000453441 NDUFB6O95139 128 aa6.88□□□□□ -1.31
COL28A1-205ENST00000453441 SAA1P0DJI8 122 aaPredicted RBP6.88□□□□□ -1.31
COL28A1-205ENST00000453441 VDAC1P21796 283 aa6.88□□□□□ -1.31
COL28A1-205ENST00000453441 CNTFRP26992 372 aa6.88□□□□□ -1.31
COL28A1-205ENST00000453441 CRIP2P52943 208 aaPredicted RBP6.88□□□□□ -1.31
COL28A1-205ENST00000453441 LINC00205P59089 165 aa6.88□□□□□ -1.31
COL28A1-205ENST00000453441 MLANAQ16655 118 aa6.88□□□□□ -1.31
COL28A1-205ENST00000453441 TMEM128Q5BJH2 165 aa6.88□□□□□ -1.31
COL28A1-205ENST00000453441 OR2B11Q5JQS5 317 aa6.88□□□□□ -1.31
COL28A1-205ENST00000453441 PUSL1Q8N0Z8 303 aaKnown RBP6.88□□□□□ -1.31
COL28A1-205ENST00000453441 KLHDC1Q8N7A1 406 aa6.88□□□□□ -1.31
COL28A1-205ENST00000453441 DMBX1Q8NFW5 382 aa6.88□□□□□ -1.31
COL28A1-205ENST00000453441 TMEM167AQ8TBQ9 72 aa6.88□□□□□ -1.31
COL28A1-205ENST00000453441 IL22RA2Q969J5 263 aa6.88□□□□□ -1.31
COL28A1-205ENST00000453441 R3HDM4Q96D70 268 aa6.88□□□□□ -1.31
COL28A1-205ENST00000453441 GALNT14Q96FL9 552 aa6.88□□□□□ -1.31
COL28A1-205ENST00000453441 RITA1Q96K30 269 aa6.88□□□□□ -1.31
COL28A1-205ENST00000453441 TSC22D3Q99576 134 aa6.88□□□□□ -1.31
COL28A1-205ENST00000453441 RTBDNQ9BSG5 229 aaPredicted RBP6.88□□□□□ -1.31
COL28A1-205ENST00000453441 C5orf66Q9H5L9 145 aa6.88□□□□□ -1.31
COL28A1-205ENST00000453441 NAA60Q9H7X0 242 aa6.88□□□□□ -1.31
COL28A1-205ENST00000453441 CACFD1Q9UGQ2 172 aa6.88□□□□□ -1.31
COL28A1-205ENST00000453441 TNCP24821 2201 aa6.88□□□□□ -1.31
COL28A1-205ENST00000453441 IGHV7-81A0A0B4J1V7 117 aa6.87□□□□□ -1.31
COL28A1-205ENST00000453441 PSMB11A5LHX3 300 aa6.87□□□□□ -1.31
COL28A1-205ENST00000453441 MARCH11A6NNE9 402 aa6.87□□□□□ -1.31
COL28A1-205ENST00000453441 SRRM4A7MD48 611 aaKnown RBP6.87□□□□□ -1.31
COL28A1-205ENST00000453441 RAMP3O60896 148 aa6.87□□□□□ -1.31
COL28A1-205ENST00000453441 S1PR2O95136 353 aa6.87□□□□□ -1.31
COL28A1-205ENST00000453441 CNIH1O95406 144 aa6.87□□□□□ -1.31
COL28A1-205ENST00000453441 CA2P00918 260 aa6.87□□□□□ -1.31
COL28A1-205ENST00000453441 VSIG10L2P0DP72 767 aa6.87□□□□□ -1.31
COL28A1-205ENST00000453441 PI3P19957 117 aa6.87□□□□□ -1.31
COL28A1-205ENST00000453441 UCP1P25874 307 aa6.87□□□□□ -1.31
COL28A1-205ENST00000453441 LPAR6P43657 344 aa6.87□□□□□ -1.31
COL28A1-205ENST00000453441 BRWD1-AS2P59051 145 aa6.87□□□□□ -1.31
COL28A1-205ENST00000453441 DEFA1P59665 94 aa6.87□□□□□ -1.31
COL28A1-205ENST00000453441 DEFA3P59666 94 aa6.87□□□□□ -1.31
COL28A1-205ENST00000453441 CX3CL1P78423 397 aa6.87□□□□□ -1.31
COL28A1-205ENST00000453441 ASAH1Q13510 395 aa6.87□□□□□ -1.31
COL28A1-205ENST00000453441 PRSS8Q16651 343 aa6.87□□□□□ -1.31
COL28A1-205ENST00000453441 AKIRIN2Q53H80 203 aa6.87□□□□□ -1.31
COL28A1-205ENST00000453441 ANKRD39Q53RE8 183 aa6.87□□□□□ -1.31
COL28A1-205ENST00000453441 THOC7Q6I9Y2 204 aaKnown RBP6.87□□□□□ -1.31
COL28A1-205ENST00000453441 CENPVQ7Z7K6 275 aaPredicted RBP6.87□□□□□ -1.31
COL28A1-205ENST00000453441 FAM219AQ8IW50 185 aa6.87□□□□□ -1.31
COL28A1-205ENST00000453441 CENPSQ8N2Z9 138 aa6.87□□□□□ -1.31
COL28A1-205ENST00000453441 STPG2Q8N412 459 aa6.87□□□□□ -1.31
COL28A1-205ENST00000453441 OR4X2Q8NGF9 303 aa6.87□□□□□ -1.31
COL28A1-205ENST00000453441 SGMS2Q8NHU3 365 aa6.87□□□□□ -1.31
COL28A1-205ENST00000453441 ARPC1AQ92747 370 aa6.87□□□□□ -1.31
COL28A1-205ENST00000453441 SPIN2AQ99865 258 aa6.87□□□□□ -1.31
COL28A1-205ENST00000453441 SPIN2BQ9BPZ2 258 aa6.87□□□□□ -1.31
COL28A1-205ENST00000453441 SRSF8Q9BRL6 282 aaKnown RBP6.87□□□□□ -1.31
COL28A1-205ENST00000453441 TMEM222Q9H0R3 208 aa6.87□□□□□ -1.31
COL28A1-205ENST00000453441 FKBP11Q9NYL4 201 aa6.87□□□□□ -1.31
COL28A1-205ENST00000453441 TRAV41A0A0B4J266 112 aa6.86□□□□□ -1.31
COL28A1-205ENST00000453441 DUXBA0A1W2PPF3 345 aa6.86□□□□□ -1.31
COL28A1-205ENST00000453441 H3BUA1 57 aa6.86□□□□□ -1.31
COL28A1-205ENST00000453441 SNAPC5O75971 98 aa6.86□□□□□ -1.31
COL28A1-205ENST00000453441 OPN1MWP04001 364 aa6.86□□□□□ -1.31
COL28A1-205ENST00000453441 ELANEP08246 267 aa6.86□□□□□ -1.31
COL28A1-205ENST00000453441 IL6RP08887 468 aaPredicted RBP6.86□□□□□ -1.31
COL28A1-205ENST00000453441 OPN1MW2P0DN77 364 aa6.86□□□□□ -1.31
COL28A1-205ENST00000453441 OPN1MW3P0DN78 364 aa6.86□□□□□ -1.31
COL28A1-205ENST00000453441 SLC6A1P30531 599 aa6.86□□□□□ -1.31
COL28A1-205ENST00000453441 RPL8P62917 257 aaKnown RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms