RNA–Protein interactions for RNA: ENST00000453091.6

RIF1-206, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 8,053 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-206ENST00000453091 TUBA4BQ9H853 241 aa6.54□□□□□ -1.36
RIF1-206ENST00000453091 C16orf97H3BN30 126 aa6.54□□□□□ -1.36
RIF1-206ENST00000453091 FGF5P12034 268 aa6.54□□□□□ -1.36
RIF1-206ENST00000453091 SUPT4H1P63272 117 aaKnown RBP6.54□□□□□ -1.36
RIF1-206ENST00000453091 VSTM2AQ8TAG5 236 aa6.54□□□□□ -1.36
RIF1-206ENST00000453091 LYNX1G3V0Z9 82 aa6.54□□□□□ -1.36
RIF1-206ENST00000453091 LYNX1P0DP58 116 aa6.54□□□□□ -1.36
RIF1-206ENST00000453091 ARTNQ5T4W7 220 aa6.54□□□□□ -1.36
RIF1-206ENST00000453091 A1L4Q6 167 aa6.54□□□□□ -1.36
RIF1-206ENST00000453091 OR2T8A6NH00 312 aa6.54□□□□□ -1.36
RIF1-206ENST00000453091 F8VVB4 439 aa6.54□□□□□ -1.36
RIF1-206ENST00000453091 F8VWA3 439 aa6.54□□□□□ -1.36
RIF1-206ENST00000453091 FXYD7P58549 80 aa6.54□□□□□ -1.36
RIF1-206ENST00000453091 RPL30P62888 115 aaKnown RBP6.54□□□□□ -1.36
RIF1-206ENST00000453091 C10orf128Q5T292 105 aa6.54□□□□□ -1.36
RIF1-206ENST00000453091 SPANXN1Q5VSR9 72 aa6.54□□□□□ -1.36
RIF1-206ENST00000453091 TM2D1Q9BX74 207 aa6.54□□□□□ -1.36
RIF1-206ENST00000453091 CHODLQ9H9P2 273 aa6.54□□□□□ -1.36
RIF1-206ENST00000453091 UQCR10Q9UDW1 63 aa6.54□□□□□ -1.36
RIF1-206ENST00000453091 UMODP07911 640 aa6.54□□□□□ -1.36
RIF1-206ENST00000453091 HSPE1P61604 102 aaKnown RBP6.54□□□□□ -1.36
RIF1-206ENST00000453091 GTF3AQ92664 365 aaKnown RBP6.54□□□□□ -1.36
RIF1-206ENST00000453091 TMEM45BQ96B21 275 aa6.54□□□□□ -1.36
RIF1-206ENST00000453091 DERL1Q9BUN8 251 aa6.54□□□□□ -1.36
RIF1-206ENST00000453091 IGKV1-27A0A075B6S5 117 aa6.54□□□□□ -1.36
RIF1-206ENST00000453091 TRAV5A0A0B4J249 113 aa6.54□□□□□ -1.36
RIF1-206ENST00000453091 A6NDN8 102 aa6.54□□□□□ -1.36
RIF1-206ENST00000453091 RPL13AP40429 203 aaKnown RBP6.54□□□□□ -1.36
RIF1-206ENST00000453091 TNFSF10P50591 281 aa6.54□□□□□ -1.36
RIF1-206ENST00000453091 ACSF3Q4G176 576 aaPredicted RBP6.54□□□□□ -1.36
RIF1-206ENST00000453091 SFTA2Q6UW10 78 aa6.54□□□□□ -1.36
RIF1-206ENST00000453091 LOC107984156A0A0G2JMH3 177 aa6.54□□□□□ -1.36
RIF1-206ENST00000453091 CEACAM1P13688 526 aa6.54□□□□□ -1.36
RIF1-206ENST00000453091 ARL17AQ8IVW1 177 aa6.54□□□□□ -1.36
RIF1-206ENST00000453091 C21orf140B9A014 251 aa6.53□□□□□ -1.36
RIF1-206ENST00000453091 C8orf88P0DMB2 117 aa6.53□□□□□ -1.36
RIF1-206ENST00000453091 MCRIP2Q9BUT9 160 aaKnown RBP6.53□□□□□ -1.36
RIF1-206ENST00000453091 ZNF430Q9H8G1 570 aaPredicted RBP6.53□□□□□ -1.36
RIF1-206ENST00000453091 ANKRD31Q8N7Z5 1873 aa6.53□□□□□ -1.36
RIF1-206ENST00000453091 LSM10Q969L4 123 aaKnown RBP6.53□□□□□ -1.36
RIF1-206ENST00000453091 A0A1B0GUS0 222 aa6.53□□□□□ -1.36
RIF1-206ENST00000453091 KIR2DL2P43627 348 aaPredicted RBP6.53□□□□□ -1.36
RIF1-206ENST00000453091 SLC25A34Q6PIV7 304 aa6.53□□□□□ -1.36
RIF1-206ENST00000453091 SPSB4Q96A44 273 aa6.53□□□□□ -1.36
RIF1-206ENST00000453091 ZFP30Q9Y2G7 519 aa6.53□□□□□ -1.36
RIF1-206ENST00000453091 E9PLN8 166 aa6.53□□□□□ -1.36
RIF1-206ENST00000453091 PYYP10082 97 aa6.53□□□□□ -1.36
RIF1-206ENST00000453091 RPL8P62917 257 aaKnown RBP6.53□□□□□ -1.36
RIF1-206ENST00000453091 Q5PR19 223 aa6.53□□□□□ -1.36
RIF1-206ENST00000453091 TCF24Q7RTU0 167 aa6.53□□□□□ -1.36
RIF1-206ENST00000453091 LINC00305Q7Z4B0 112 aa6.53□□□□□ -1.36
RIF1-206ENST00000453091 CDK5RAP2Q96SN8 1893 aa6.53□□□□□ -1.36
RIF1-206ENST00000453091 F2RL2O00254 374 aa6.53□□□□□ -1.36
RIF1-206ENST00000453091 C2orf83Q53S99 150 aa6.53□□□□□ -1.36
RIF1-206ENST00000453091 MBNL2Q5VZF2 373 aaKnown RBP6.53□□□□□ -1.36
RIF1-206ENST00000453091 MYOZ3Q8TDC0 251 aa6.53□□□□□ -1.36
RIF1-206ENST00000453091 AMMECR1Q9Y4X0 333 aaPredicted RBP6.53□□□□□ -1.36
RIF1-206ENST00000453091 ZNF729A6NN14 1252 aaPredicted RBP6.53□□□□□ -1.36
RIF1-206ENST00000453091 CLPSP04118 112 aa6.53□□□□□ -1.36
RIF1-206ENST00000453091 PLP1P60201 277 aa6.53□□□□□ -1.36
RIF1-206ENST00000453091 ASPHD1Q5U4P2 390 aa6.53□□□□□ -1.36
RIF1-206ENST00000453091 CA11O75493 328 aa6.52□□□□□ -1.37
RIF1-206ENST00000453091 IGKV3-20P01619 116 aa6.52□□□□□ -1.37
RIF1-206ENST00000453091 CKS2P33552 79 aa6.52□□□□□ -1.37
RIF1-206ENST00000453091 LHX2P50458 406 aa6.52□□□□□ -1.37
RIF1-206ENST00000453091 ZCCHC14Q8WYQ9 949 aaKnown RBP6.52□□□□□ -1.37
RIF1-206ENST00000453091 OR9G9P0C7N8 305 aa6.52□□□□□ -1.37
RIF1-206ENST00000453091 CD24P25063 80 aa6.52□□□□□ -1.37
RIF1-206ENST00000453091 PRDM14Q9GZV8 571 aa6.52□□□□□ -1.37
RIF1-206ENST00000453091 SMDT1Q9H4I9 107 aa6.52□□□□□ -1.37
RIF1-206ENST00000453091 PKIBQ9C010 78 aa6.52□□□□□ -1.37
RIF1-206ENST00000453091 TTC3P53804 2025 aa6.52□□□□□ -1.37
RIF1-206ENST00000453091 DPRXA6NFQ7 191 aa6.52□□□□□ -1.37
RIF1-206ENST00000453091 LGALS7P47929 136 aa6.52□□□□□ -1.37
RIF1-206ENST00000453091 DMRTC2Q8IXT2 367 aaPredicted RBP6.52□□□□□ -1.37
RIF1-206ENST00000453091 DNASE2BQ8WZ79 361 aa6.52□□□□□ -1.37
RIF1-206ENST00000453091 HS3ST6Q96QI5 342 aa6.52□□□□□ -1.37
RIF1-206ENST00000453091 IL36BQ9NZH7 164 aa6.52□□□□□ -1.37
RIF1-206ENST00000453091 LBHQ53QV2 105 aaPredicted RBP6.52□□□□□ -1.37
RIF1-206ENST00000453091 BEX4Q9NWD9 120 aaPredicted RBP6.52□□□□□ -1.37
RIF1-206ENST00000453091 CRIM1Q9NZV1 1036 aa6.52□□□□□ -1.37
RIF1-206ENST00000453091 UBE2CO00762 179 aa6.52□□□□□ -1.37
RIF1-206ENST00000453091 CYP2G1PQ6ZSU1 146 aa6.52□□□□□ -1.37
RIF1-206ENST00000453091 HIST3H2BBQ8N257 126 aa6.52□□□□□ -1.37
RIF1-206ENST00000453091 EIF4E3Q8N5X7 224 aaKnown RBP6.52□□□□□ -1.37
RIF1-206ENST00000453091 AUP1Q9Y679 476 aa6.52□□□□□ -1.37
RIF1-206ENST00000453091 A8MWL6 223 aa6.51□□□□□ -1.37
RIF1-206ENST00000453091 FOXH1O75593 365 aa6.51□□□□□ -1.37
RIF1-206ENST00000453091 UCP1P25874 307 aa6.51□□□□□ -1.37
RIF1-206ENST00000453091 PLAURQ03405 335 aa6.51□□□□□ -1.37
RIF1-206ENST00000453091 FOXI3A8MTJ6 420 aaPredicted RBP6.51□□□□□ -1.37
RIF1-206ENST00000453091 CCL3L1P16619 93 aa6.51□□□□□ -1.37
RIF1-206ENST00000453091 PYY3Q5JQD4 70 aa6.51□□□□□ -1.37
RIF1-206ENST00000453091 NFAM1Q8NET5 270 aaPredicted RBP6.51□□□□□ -1.37
RIF1-206ENST00000453091 HIST1H2BLQ99880 126 aa6.51□□□□□ -1.37
RIF1-206ENST00000453091 HLA-DQA1P01909 254 aa6.51□□□□□ -1.37
RIF1-206ENST00000453091 SELLP14151 372 aa6.51□□□□□ -1.37
RIF1-206ENST00000453091 TMEM256Q8N2U0 113 aa6.51□□□□□ -1.37
RIF1-206ENST00000453091 TMEM208Q9BTX3 173 aa6.51□□□□□ -1.37
RIF1-206ENST00000453091 IGHV3OR16-12A0A075B7B8 117 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms