RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 HIVEP1P15822 2718 aa15.42■□□□□ 0.06
RPS28-202ENST00000449223 FAM90A26D6RGX4 464 aa15.42■□□□□ 0.06
RPS28-202ENST00000449223 PSG5Q15238 335 aa15.42■□□□□ 0.06
RPS28-202ENST00000449223 IZUMO4Q1ZYL8 232 aa15.42■□□□□ 0.06
RPS28-202ENST00000449223 LRRC75BQ2VPJ9 315 aa15.42■□□□□ 0.06
RPS28-202ENST00000449223 PDLIM3Q53GG5 364 aaPredicted RBP15.42■□□□□ 0.06
RPS28-202ENST00000449223 OR2T35Q8NGX2 323 aa15.42■□□□□ 0.06
RPS28-202ENST00000449223 TMEM167AQ8TBQ9 72 aa15.42■□□□□ 0.06
RPS28-202ENST00000449223 PPP1R1CQ8WVI7 109 aa15.42■□□□□ 0.06
RPS28-202ENST00000449223 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.42■□□□□ 0.06
RPS28-202ENST00000449223 TNCP24821 2201 aa15.41■□□□□ 0.06
RPS28-202ENST00000449223 C15orf61A6NNL5 157 aa15.41■□□□□ 0.06
RPS28-202ENST00000449223 UPK2O00526 184 aa15.41■□□□□ 0.06
RPS28-202ENST00000449223 ID3Q02535 119 aa15.41■□□□□ 0.06
RPS28-202ENST00000449223 FGL1Q08830 312 aa15.41■□□□□ 0.06
RPS28-202ENST00000449223 FBLN7Q53RD9 439 aa15.41■□□□□ 0.06
RPS28-202ENST00000449223 PLSCR3Q9NRY6 295 aa15.41■□□□□ 0.06
RPS28-202ENST00000449223 ZFP57Q9NU63 452 aa15.41■□□□□ 0.06
RPS28-202ENST00000449223 TMEM14BQ9NUH8 114 aa15.41■□□□□ 0.06
RPS28-202ENST00000449223 GSKIPQ9P0R6 139 aa15.41■□□□□ 0.06
RPS28-202ENST00000449223 SOX21Q9Y651 276 aaPredicted RBP15.41■□□□□ 0.06
RPS28-202ENST00000449223 SONP18583 2426 aaKnown RBP15.4■□□□□ 0.06
RPS28-202ENST00000449223 NBR2O15453 112 aa15.4■□□□□ 0.06
RPS28-202ENST00000449223 CD99P14209 185 aa15.4■□□□□ 0.06
RPS28-202ENST00000449223 CD24P25063 80 aa15.4■□□□□ 0.06
RPS28-202ENST00000449223 MRGPRG-AS1Q2M3A8 158 aa15.4■□□□□ 0.06
RPS28-202ENST00000449223 OR52E5Q8NH55 327 aa15.4■□□□□ 0.06
RPS28-202ENST00000449223 YAE1D1Q9NRH1 226 aa15.4■□□□□ 0.06
RPS28-202ENST00000449223 HSPB7Q9UBY9 170 aa15.4■□□□□ 0.06
RPS28-202ENST00000449223 FOXA2Q9Y261 457 aaPredicted RBP15.4■□□□□ 0.06
RPS28-202ENST00000449223 SIGLEC9Q9Y336 463 aa15.4■□□□□ 0.06
RPS28-202ENST00000449223 ZFHX3Q15911 3703 aa15.4■□□□□ 0.06
RPS28-202ENST00000449223 RRHO14718 337 aa15.39■□□□□ 0.05
RPS28-202ENST00000449223 SLC25A17O43808 307 aa15.39■□□□□ 0.05
RPS28-202ENST00000449223 MBPP02686 304 aaPredicted RBP15.39■□□□□ 0.05
RPS28-202ENST00000449223 TMEM11P17152 192 aa15.39■□□□□ 0.05
RPS28-202ENST00000449223 HNF1AP20823 631 aa15.39■□□□□ 0.05
RPS28-202ENST00000449223 CNTFRP26992 372 aa15.39■□□□□ 0.05
RPS28-202ENST00000449223 PSMB6P28072 239 aa15.39■□□□□ 0.05
RPS28-202ENST00000449223 NKX2-1P43699 371 aaPredicted RBP15.39■□□□□ 0.05
RPS28-202ENST00000449223 HES1Q14469 280 aa15.39■□□□□ 0.05
RPS28-202ENST00000449223 MMDQ15546 238 aa15.39■□□□□ 0.05
RPS28-202ENST00000449223 DEFB112Q30KQ8 113 aa15.39■□□□□ 0.05
RPS28-202ENST00000449223 BCL6BQ8N143 479 aaPredicted RBP15.39■□□□□ 0.05
RPS28-202ENST00000449223 OR1S1Q8NH92 325 aa15.39■□□□□ 0.05
RPS28-202ENST00000449223 SSX3Q99909 188 aa15.39■□□□□ 0.05
RPS28-202ENST00000449223 PRNDQ9UKY0 176 aa15.39■□□□□ 0.05
RPS28-202ENST00000449223 ZNF257Q9Y2Q1 563 aa15.39■□□□□ 0.05
RPS28-202ENST00000449223 POMT1Q9Y6A1 747 aa15.39■□□□□ 0.05
RPS28-202ENST00000449223 TRAV3A0A0B4J244 114 aa15.38■□□□□ 0.05
RPS28-202ENST00000449223 SNAPC5O75971 98 aa15.38■□□□□ 0.05
RPS28-202ENST00000449223 MPC2O95563 127 aa15.38■□□□□ 0.05
RPS28-202ENST00000449223 C1QBP02746 253 aa15.38■□□□□ 0.05
RPS28-202ENST00000449223 F2RL1P55085 397 aa15.38■□□□□ 0.05
RPS28-202ENST00000449223 RAB32Q13637 225 aa15.38■□□□□ 0.05
RPS28-202ENST00000449223 FAM71E2Q8N5Q1 922 aa15.38■□□□□ 0.05
RPS28-202ENST00000449223 OR4A16Q8NH70 328 aa15.38■□□□□ 0.05
RPS28-202ENST00000449223 FKBP11Q9NYL4 201 aa15.38■□□□□ 0.05
RPS28-202ENST00000449223 TET2Q6N021 2002 aaPredicted RBP15.38■□□□□ 0.05
RPS28-202ENST00000449223 TRAV14DV4A0A0A6YYC5 116 aa15.38■□□□□ 0.05
RPS28-202ENST00000449223 ST8SIA3O43173 380 aa15.38■□□□□ 0.05
RPS28-202ENST00000449223 LY6G6DO95868 133 aa15.38■□□□□ 0.05
RPS28-202ENST00000449223 PET100P0DJ07 73 aa15.38■□□□□ 0.05
RPS28-202ENST00000449223 LYL1P12980 280 aa15.38■□□□□ 0.05
RPS28-202ENST00000449223 RPL8P62917 257 aaKnown RBP15.38■□□□□ 0.05
RPS28-202ENST00000449223 TNFRSF9Q07011 255 aa15.38■□□□□ 0.05
RPS28-202ENST00000449223 Q5BKY6 102 aa15.38■□□□□ 0.05
RPS28-202ENST00000449223 CXorf66Q5JRM2 361 aaPredicted RBP15.38■□□□□ 0.05
RPS28-202ENST00000449223 PPP1R27Q86WC6 154 aa15.38■□□□□ 0.05
RPS28-202ENST00000449223 C1RLQ9NZP8 487 aa15.38■□□□□ 0.05
RPS28-202ENST00000449223 KIAA1456Q9P272 454 aa15.38■□□□□ 0.05
RPS28-202ENST00000449223 METTL1Q9UBP6 276 aaKnown RBP15.38■□□□□ 0.05
RPS28-202ENST00000449223 TCF19Q9Y242 345 aa15.38■□□□□ 0.05
RPS28-202ENST00000449223 K7EPK0 472 aa15.37■□□□□ 0.05
RPS28-202ENST00000449223 SLC25A4P12235 298 aa15.37■□□□□ 0.05
RPS28-202ENST00000449223 MAS1LP35410 378 aa15.37■□□□□ 0.05
RPS28-202ENST00000449223 HNF4GQ14541 408 aa15.37■□□□□ 0.05
RPS28-202ENST00000449223 PRSS8Q16651 343 aa15.37■□□□□ 0.05
RPS28-202ENST00000449223 C5orf64Q2M2E5 130 aa15.37■□□□□ 0.05
RPS28-202ENST00000449223 Q6YL49 198 aa15.37■□□□□ 0.05
RPS28-202ENST00000449223 MMD2Q8IY49 270 aa15.37■□□□□ 0.05
RPS28-202ENST00000449223 OR5B3Q8NH48 314 aa15.37■□□□□ 0.05
RPS28-202ENST00000449223 ZNF48Q96MX3 618 aaPredicted RBP15.37■□□□□ 0.05
RPS28-202ENST00000449223 RBM14Q96PK6 669 aaKnown RBP15.37■□□□□ 0.05
RPS28-202ENST00000449223 SMR3AQ99954 134 aa15.37■□□□□ 0.05
RPS28-202ENST00000449223 ZNF430Q9H8G1 570 aaPredicted RBP15.37■□□□□ 0.05
RPS28-202ENST00000449223 TPSG1Q9NRR2 321 aa15.37■□□□□ 0.05
RPS28-202ENST00000449223 PITPNC1Q9UKF7 332 aa15.37■□□□□ 0.05
RPS28-202ENST00000449223 RCL1Q9Y2P8 373 aaKnown RBP15.37■□□□□ 0.05
RPS28-202ENST00000449223 NSG2Q9Y328 171 aa15.37■□□□□ 0.05
RPS28-202ENST00000449223 HIVEP2P31629 2446 aa15.36■□□□□ 0.05
RPS28-202ENST00000449223 DEDDO75618 318 aa15.36■□□□□ 0.05
RPS28-202ENST00000449223 OR2F2O95006 317 aa15.36■□□□□ 0.05
RPS28-202ENST00000449223 IER3P46695 156 aa15.36■□□□□ 0.05
RPS28-202ENST00000449223 OR2B8PP59922 312 aa15.36■□□□□ 0.05
RPS28-202ENST00000449223 C11orf87Q6NUJ2 197 aa15.36■□□□□ 0.05
RPS28-202ENST00000449223 OR5R1Q8NH85 324 aa15.36■□□□□ 0.05
RPS28-202ENST00000449223 RNF126Q9BV68 326 aa15.36■□□□□ 0.05
RPS28-202ENST00000449223 C11orf1Q9H5F2 150 aa15.36■□□□□ 0.05
RPS28-202ENST00000449223 MDFIC2A0A1B0GVS7 189 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 130.8 ms