RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 ADAD2Q8NCV1 583 aaKnown RBP9.82□□□□□ -0.84
PRPF40A-203ENST00000448428 OR51H1Q8NH63 302 aa9.82□□□□□ -0.84
PRPF40A-203ENST00000448428 VSTM2AQ8TAG5 236 aa9.82□□□□□ -0.84
PRPF40A-203ENST00000448428 BORCS5Q969J3 196 aa9.82□□□□□ -0.84
PRPF40A-203ENST00000448428 SPIN2AQ99865 258 aa9.82□□□□□ -0.84
PRPF40A-203ENST00000448428 SPIN2BQ9BPZ2 258 aa9.82□□□□□ -0.84
PRPF40A-203ENST00000448428 MIXL1Q9H2W2 232 aa9.82□□□□□ -0.84
PRPF40A-203ENST00000448428 EXTL2Q9UBQ6 330 aa9.82□□□□□ -0.84
PRPF40A-203ENST00000448428 ANKRD34BA5PLL1 514 aa9.81□□□□□ -0.84
PRPF40A-203ENST00000448428 HMX3A6NHT5 357 aa9.81□□□□□ -0.84
PRPF40A-203ENST00000448428 CTDSP2O14595 271 aa9.81□□□□□ -0.84
PRPF40A-203ENST00000448428 PGLYRP1O75594 196 aaPredicted RBP9.81□□□□□ -0.84
PRPF40A-203ENST00000448428 HPRT1P00492 218 aa9.81□□□□□ -0.84
PRPF40A-203ENST00000448428 PRH1P02810 166 aa9.81□□□□□ -0.84
PRPF40A-203ENST00000448428 IL6RP08887 468 aaPredicted RBP9.81□□□□□ -0.84
PRPF40A-203ENST00000448428 RCVRNP35243 200 aa9.81□□□□□ -0.84
PRPF40A-203ENST00000448428 MAS1LP35410 378 aa9.81□□□□□ -0.84
PRPF40A-203ENST00000448428 TMBIM6P55061 237 aa9.81□□□□□ -0.84
PRPF40A-203ENST00000448428 TSPAN5P62079 268 aa9.81□□□□□ -0.84
PRPF40A-203ENST00000448428 DEFA5Q01523 94 aa9.81□□□□□ -0.84
PRPF40A-203ENST00000448428 RNASE12Q5GAN4 147 aaKnown RBP9.81□□□□□ -0.84
PRPF40A-203ENST00000448428 AADACL3Q5VUY0 350 aa9.81□□□□□ -0.84
PRPF40A-203ENST00000448428 OR4A47Q6IF82 309 aa9.81□□□□□ -0.84
PRPF40A-203ENST00000448428 TTC9CQ8N5M4 171 aa9.81□□□□□ -0.84
PRPF40A-203ENST00000448428 ABHD1Q96SE0 405 aa9.81□□□□□ -0.84
PRPF40A-203ENST00000448428 AIFM2Q9BRQ8 373 aa9.81□□□□□ -0.84
PRPF40A-203ENST00000448428 FXYD6Q9H0Q3 95 aa9.81□□□□□ -0.84
PRPF40A-203ENST00000448428 KLK11Q9UBX7 282 aa9.81□□□□□ -0.84
PRPF40A-203ENST00000448428 ZMAT5Q9UDW3 170 aaKnown RBP9.81□□□□□ -0.84
PRPF40A-203ENST00000448428 TGP01266 2768 aa9.8□□□□□ -0.84
PRPF40A-203ENST00000448428 TRAV3A0A0B4J244 114 aa9.8□□□□□ -0.84
PRPF40A-203ENST00000448428 A0A1B0GW64 132 aa9.8□□□□□ -0.84
PRPF40A-203ENST00000448428 TEX22C9J3V5 150 aa9.8□□□□□ -0.84
PRPF40A-203ENST00000448428 RLN1P04808 185 aa9.8□□□□□ -0.84
PRPF40A-203ENST00000448428 MYOD1P15172 320 aa9.8□□□□□ -0.84
PRPF40A-203ENST00000448428 NQO2P16083 231 aa9.8□□□□□ -0.84
PRPF40A-203ENST00000448428 ECI1P42126 302 aa9.8□□□□□ -0.84
PRPF40A-203ENST00000448428 RPL27AP46776 148 aaKnown RBP9.8□□□□□ -0.84
PRPF40A-203ENST00000448428 RPL5P46777 297 aaKnown RBP9.8□□□□□ -0.84
PRPF40A-203ENST00000448428 TAS2R31P59538 309 aa9.8□□□□□ -0.84
PRPF40A-203ENST00000448428 RPL8P62917 257 aaKnown RBP9.8□□□□□ -0.84
PRPF40A-203ENST00000448428 ZNF45Q02386 682 aa9.8□□□□□ -0.84
PRPF40A-203ENST00000448428 POU2AF1Q16633 256 aa9.8□□□□□ -0.84
PRPF40A-203ENST00000448428 ZNF343Q6P1L6 599 aa9.8□□□□□ -0.84
PRPF40A-203ENST00000448428 OR52I2Q8NH67 350 aa9.8□□□□□ -0.84
PRPF40A-203ENST00000448428 CD300LFQ8TDQ1 290 aa9.8□□□□□ -0.84
PRPF40A-203ENST00000448428 RAB2BQ8WUD1 216 aa9.8□□□□□ -0.84
PRPF40A-203ENST00000448428 USMG5Q96IX5 58 aa9.8□□□□□ -0.84
PRPF40A-203ENST00000448428 FYTTD1Q96QD9 318 aaKnown RBP9.8□□□□□ -0.84
PRPF40A-203ENST00000448428 PLEKHA2Q9HB19 425 aa9.8□□□□□ -0.84
PRPF40A-203ENST00000448428 RANGRFQ9HD47 186 aaPredicted RBP9.8□□□□□ -0.84
PRPF40A-203ENST00000448428 HRASLSQ9HDD0 168 aa9.8□□□□□ -0.84
PRPF40A-203ENST00000448428 BET1LQ9NYM9 111 aa9.8□□□□□ -0.84
PRPF40A-203ENST00000448428 PRKDCP78527 4128 aaKnown RBP9.79□□□□□ -0.84
PRPF40A-203ENST00000448428 TRBV9A0A0B4J1U6 114 aa9.79□□□□□ -0.84
PRPF40A-203ENST00000448428 CGB1A6NKQ9 187 aa9.79□□□□□ -0.84
PRPF40A-203ENST00000448428 M0QYG6 137 aa9.79□□□□□ -0.84
PRPF40A-203ENST00000448428 GPR31O00270 319 aa9.79□□□□□ -0.84
PRPF40A-203ENST00000448428 UPK2O00526 184 aa9.79□□□□□ -0.84
PRPF40A-203ENST00000448428 RGS5O15539 181 aa9.79□□□□□ -0.84
PRPF40A-203ENST00000448428 TPPPO94811 219 aa9.79□□□□□ -0.84
PRPF40A-203ENST00000448428 S1PR2O95136 353 aa9.79□□□□□ -0.84
PRPF40A-203ENST00000448428 ZNF735P0CB33 412 aa9.79□□□□□ -0.84
PRPF40A-203ENST00000448428 HLA-GP17693 338 aa9.79□□□□□ -0.84
PRPF40A-203ENST00000448428 F2RP25116 425 aa9.79□□□□□ -0.84
PRPF40A-203ENST00000448428 LPAR6P43657 344 aa9.79□□□□□ -0.84
PRPF40A-203ENST00000448428 INSL3P51460 131 aa9.79□□□□□ -0.84
PRPF40A-203ENST00000448428 RHOGP84095 191 aa9.79□□□□□ -0.84
PRPF40A-203ENST00000448428 VAX1Q5SQQ9 334 aa9.79□□□□□ -0.84
PRPF40A-203ENST00000448428 ZNF429Q86V71 674 aa9.79□□□□□ -0.84
PRPF40A-203ENST00000448428 LAX1Q8IWV1 398 aa9.79□□□□□ -0.84
PRPF40A-203ENST00000448428 CMTM1Q8IZ96 169 aa9.79□□□□□ -0.84
PRPF40A-203ENST00000448428 OR4A5Q8NH83 315 aa9.79□□□□□ -0.84
PRPF40A-203ENST00000448428 DYNC2LI1Q8TCX1 351 aa9.79□□□□□ -0.84
PRPF40A-203ENST00000448428 DGCR14Q96DF8 476 aaKnown RBP9.79□□□□□ -0.84
PRPF40A-203ENST00000448428 BCL7BQ9BQE9 202 aa9.79□□□□□ -0.84
PRPF40A-203ENST00000448428 AKIP1Q9NQ31 210 aa9.79□□□□□ -0.84
PRPF40A-203ENST00000448428 SLC2A9Q9NRM0 540 aa9.79□□□□□ -0.84
PRPF40A-203ENST00000448428 MTFP1Q9UDX5 166 aa9.79□□□□□ -0.84
PRPF40A-203ENST00000448428 TRBV12-3P01733 135 aa9.78□□□□□ -0.84
PRPF40A-203ENST00000448428 RPA2P15927 270 aa9.78□□□□□ -0.84
PRPF40A-203ENST00000448428 UCP3P55916 312 aa9.78□□□□□ -0.84
PRPF40A-203ENST00000448428 ATP5G2Q06055 141 aa9.78□□□□□ -0.84
PRPF40A-203ENST00000448428 ZNF585BQ52M93 769 aa9.78□□□□□ -0.84
PRPF40A-203ENST00000448428 PHLDA2Q53GA4 152 aa9.78□□□□□ -0.84
PRPF40A-203ENST00000448428 LPCAT3Q6P1A2 487 aa9.78□□□□□ -0.84
PRPF40A-203ENST00000448428 ACSM6Q6P461 480 aa9.78□□□□□ -0.84
PRPF40A-203ENST00000448428 SLC25A42Q86VD7 318 aa9.78□□□□□ -0.84
PRPF40A-203ENST00000448428 DMBX1Q8NFW5 382 aa9.78□□□□□ -0.84
PRPF40A-203ENST00000448428 C15orf40Q8WUR7 153 aa9.78□□□□□ -0.84
PRPF40A-203ENST00000448428 FCAMRQ8WWV6 532 aa9.78□□□□□ -0.84
PRPF40A-203ENST00000448428 PRR25Q96S07 402 aa9.78□□□□□ -0.84
PRPF40A-203ENST00000448428 RSRP1Q9BUV0 290 aa9.78□□□□□ -0.84
PRPF40A-203ENST00000448428 TMEM140Q9NV12 185 aa9.78□□□□□ -0.84
PRPF40A-203ENST00000448428 PEF1Q9UBV8 284 aaKnown RBP9.78□□□□□ -0.84
PRPF40A-203ENST00000448428 ZNF257Q9Y2Q1 563 aa9.78□□□□□ -0.84
PRPF40A-203ENST00000448428 FAM223BA6NKX1 122 aa9.77□□□□□ -0.85
PRPF40A-203ENST00000448428 NPIPB5A8MRT5 1133 aa9.77□□□□□ -0.85
PRPF40A-203ENST00000448428 SAP30O75446 220 aa9.77□□□□□ -0.85
PRPF40A-203ENST00000448428 CD3DP04234 171 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms