RNA–Protein interactions for RNA: ENST00000447124.1

SDC1-205, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-205ENST00000447124 EXOSC2Q13868 293 aaKnown RBP15.78■□□□□ 0.12
SDC1-205ENST00000447124 MSMO1Q15800 293 aa15.78■□□□□ 0.12
SDC1-205ENST00000447124 RPEL1Q2QD12 228 aa15.78■□□□□ 0.12
SDC1-205ENST00000447124 ADAMTSL5Q6ZMM2 481 aa15.78■□□□□ 0.12
SDC1-205ENST00000447124 SSX9Q7RTT3 188 aa15.78■□□□□ 0.12
SDC1-205ENST00000447124 FAM223AQ8IWN6 122 aa15.78■□□□□ 0.12
SDC1-205ENST00000447124 GIMAP1Q8WWP7 306 aa15.78■□□□□ 0.12
SDC1-205ENST00000447124 RCHY1Q96PM5 261 aa15.78■□□□□ 0.12
SDC1-205ENST00000447124 SLC5A7Q9GZV3 580 aa15.78■□□□□ 0.12
SDC1-205ENST00000447124 C19orf73Q9NVV2 129 aa15.78■□□□□ 0.12
SDC1-205ENST00000447124 IZUMO1RA6ND01 250 aa15.77■□□□□ 0.12
SDC1-205ENST00000447124 AIREO43918 545 aa15.77■□□□□ 0.12
SDC1-205ENST00000447124 TMEM127O75204 238 aa15.77■□□□□ 0.12
SDC1-205ENST00000447124 ZNF735P0CB33 412 aa15.77■□□□□ 0.12
SDC1-205ENST00000447124 IGHV4-30-4P0DP06 118 aa15.77■□□□□ 0.12
SDC1-205ENST00000447124 RPL27AP46776 148 aaKnown RBP15.77■□□□□ 0.12
SDC1-205ENST00000447124 TATDN3Q17R31 274 aa15.77■□□□□ 0.12
SDC1-205ENST00000447124 SPAG16Q8N0X2 631 aa15.77■□□□□ 0.12
SDC1-205ENST00000447124 NECAP1Q8NC96 275 aa15.77■□□□□ 0.12
SDC1-205ENST00000447124 ZBTB34Q8NCN2 500 aa15.77■□□□□ 0.12
SDC1-205ENST00000447124 OR5AP2Q8NGF4 316 aa15.77■□□□□ 0.12
SDC1-205ENST00000447124 VSTM2AQ8TAG5 236 aa15.77■□□□□ 0.12
SDC1-205ENST00000447124 FANCD2OSQ96PS1 177 aa15.77■□□□□ 0.12
SDC1-205ENST00000447124 FYTTD1Q96QD9 318 aaKnown RBP15.77■□□□□ 0.12
SDC1-205ENST00000447124 THAP7Q9BT49 309 aaPredicted RBP15.77■□□□□ 0.12
SDC1-205ENST00000447124 SLC2A9Q9NRM0 540 aa15.77■□□□□ 0.12
SDC1-205ENST00000447124 SIGLEC8Q9NYZ4 499 aa15.77■□□□□ 0.12
SDC1-205ENST00000447124 CGB1A6NKQ9 187 aa15.76■□□□□ 0.11
SDC1-205ENST00000447124 HRASP01112 189 aa15.76■□□□□ 0.11
SDC1-205ENST00000447124 AREGP15514 252 aa15.76■□□□□ 0.11
SDC1-205ENST00000447124 MAS1LP35410 378 aa15.76■□□□□ 0.11
SDC1-205ENST00000447124 KIR2DS2P43631 304 aa15.76■□□□□ 0.11
SDC1-205ENST00000447124 FXYD4P59646 89 aa15.76■□□□□ 0.11
SDC1-205ENST00000447124 SLC25A42Q86VD7 318 aa15.76■□□□□ 0.11
SDC1-205ENST00000447124 TSPAN14Q8NG11 270 aa15.76■□□□□ 0.11
SDC1-205ENST00000447124 S100A16Q96FQ6 103 aaKnown RBP15.76■□□□□ 0.11
SDC1-205ENST00000447124 ZNF257Q9Y2Q1 563 aa15.76■□□□□ 0.11
SDC1-205ENST00000447124 A0A087WXM4 84 aa15.75■□□□□ 0.11
SDC1-205ENST00000447124 TRAV3A0A0B4J244 114 aa15.75■□□□□ 0.11
SDC1-205ENST00000447124 NPIPB5A8MRT5 1133 aa15.75■□□□□ 0.11
SDC1-205ENST00000447124 A8MZ25 164 aa15.75■□□□□ 0.11
SDC1-205ENST00000447124 H0Y980 276 aa15.75■□□□□ 0.11
SDC1-205ENST00000447124 SULT1C2O00338 296 aa15.75■□□□□ 0.11
SDC1-205ENST00000447124 NDUFB8O95169 186 aa15.75■□□□□ 0.11
SDC1-205ENST00000447124 CRYGCP07315 174 aa15.75■□□□□ 0.11
SDC1-205ENST00000447124 CBX5P45973 191 aa15.75■□□□□ 0.11
SDC1-205ENST00000447124 KLK9Q2XQG4 91 aa15.75■□□□□ 0.11
SDC1-205ENST00000447124 C15orf32Q32M92 178 aa15.75■□□□□ 0.11
SDC1-205ENST00000447124 TIMM50Q3ZCQ8 353 aa15.75■□□□□ 0.11
SDC1-205ENST00000447124 ZNF818PQ6ZRF7 136 aa15.75■□□□□ 0.11
SDC1-205ENST00000447124 CROCCP3Q8IVE0 287 aa15.75■□□□□ 0.11
SDC1-205ENST00000447124 BET1LQ9NYM9 111 aa15.75■□□□□ 0.11
SDC1-205ENST00000447124 FBXL7Q9UJT9 491 aa15.75■□□□□ 0.11
SDC1-205ENST00000447124 KLK9Q9UKQ9 250 aa15.75■□□□□ 0.11
SDC1-205ENST00000447124 ANAPC10Q9UM13 185 aa15.75■□□□□ 0.11
SDC1-205ENST00000447124 PPP5D1E7EU14 171 aa15.74■□□□□ 0.11
SDC1-205ENST00000447124 PSMB6P28072 239 aa15.74■□□□□ 0.11
SDC1-205ENST00000447124 GNRHRP30968 328 aa15.74■□□□□ 0.11
SDC1-205ENST00000447124 RFX2P48378 723 aa15.74■□□□□ 0.11
SDC1-205ENST00000447124 RPL8P62917 257 aaKnown RBP15.74■□□□□ 0.11
SDC1-205ENST00000447124 OR4A47Q6IF82 309 aa15.74■□□□□ 0.11
SDC1-205ENST00000447124 DHRS11Q6UWP2 260 aa15.74■□□□□ 0.11
SDC1-205ENST00000447124 DYNC2H1Q8NCM8 4307 aaKnown RBP15.74■□□□□ 0.11
SDC1-205ENST00000447124 RBFOX2O43251 390 aaKnown RBP eCLIP15.73■□□□□ 0.11
SDC1-205ENST00000447124 IGHV3-23P01764 117 aa15.73■□□□□ 0.11
SDC1-205ENST00000447124 HLA-AP01891 365 aaKnown RBP15.73■□□□□ 0.11
SDC1-205ENST00000447124 CTRB1P17538 263 aa15.73■□□□□ 0.11
SDC1-205ENST00000447124 HLA-GP17693 338 aa15.73■□□□□ 0.11
SDC1-205ENST00000447124 EDN2P20800 178 aa15.73■□□□□ 0.11
SDC1-205ENST00000447124 TAS2R20P59543 309 aa15.73■□□□□ 0.11
SDC1-205ENST00000447124 UBE2NLQ5JXB2 153 aa15.73■□□□□ 0.11
SDC1-205ENST00000447124 CTRB2Q6GPI1 263 aa15.73■□□□□ 0.11
SDC1-205ENST00000447124 SAMD12Q8N8I0 201 aa15.73■□□□□ 0.11
SDC1-205ENST00000447124 S4R3C0 116 aa15.73■□□□□ 0.11
SDC1-205ENST00000447124 DPPA5A6NC42 116 aa15.72■□□□□ 0.11
SDC1-205ENST00000447124 UPK2O00526 184 aa15.72■□□□□ 0.11
SDC1-205ENST00000447124 OR2C1O95371 312 aa15.72■□□□□ 0.11
SDC1-205ENST00000447124 HPRT1P00492 218 aa15.72■□□□□ 0.11
SDC1-205ENST00000447124 NAT1P18440 290 aa15.72■□□□□ 0.11
SDC1-205ENST00000447124 OR2B8PP59922 312 aa15.72■□□□□ 0.11
SDC1-205ENST00000447124 POU2AF1Q16633 256 aa15.72■□□□□ 0.11
SDC1-205ENST00000447124 TMEM17Q86X19 198 aa15.72■□□□□ 0.11
SDC1-205ENST00000447124 LYSMD2Q8IV50 215 aa15.72■□□□□ 0.11
SDC1-205ENST00000447124 SGPP2Q8IWX5 399 aa15.72■□□□□ 0.11
SDC1-205ENST00000447124 OR4A5Q8NH83 315 aa15.72■□□□□ 0.11
SDC1-205ENST00000447124 TM2D3Q9BRN9 247 aa15.72■□□□□ 0.11
SDC1-205ENST00000447124 C3orf84H3BNL1 204 aa15.71■□□□□ 0.11
SDC1-205ENST00000447124 PMP2P02689 132 aa15.71■□□□□ 0.11
SDC1-205ENST00000447124 REG1AP05451 166 aa15.71■□□□□ 0.11
SDC1-205ENST00000447124 TAS2R31P59538 309 aa15.71■□□□□ 0.11
SDC1-205ENST00000447124 Q8N402 240 aa15.71■□□□□ 0.11
SDC1-205ENST00000447124 OR51H1Q8NH63 302 aa15.71■□□□□ 0.11
SDC1-205ENST00000447124 KCTD12Q96CX2 325 aaKnown RBP15.71■□□□□ 0.11
SDC1-205ENST00000447124 CCDC140Q96MF4 163 aa15.71■□□□□ 0.11
SDC1-205ENST00000447124 HRASLSQ9HDD0 168 aa15.71■□□□□ 0.11
SDC1-205ENST00000447124 IFT46Q9NQC8 304 aa15.71■□□□□ 0.11
SDC1-205ENST00000447124 EHFQ9NZC4 300 aa15.71■□□□□ 0.11
SDC1-205ENST00000447124 PEMTQ9UBM1 199 aa15.71■□□□□ 0.11
SDC1-205ENST00000447124 ZNF785A8K8V0 405 aa15.7■□□□□ 0.1
SDC1-205ENST00000447124 PGLYRP1O75594 196 aaPredicted RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms