RNA–Protein interactions for RNA: ENST00000446646.1

HDAC9-216, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-216ENST00000446646 ZNF286AQ9HBT8 521 aa5.42□□□□□ -1.54
HDAC9-216ENST00000446646 AK3Q9UIJ7 227 aa5.42□□□□□ -1.54
HDAC9-216ENST00000446646 VPS13BQ7Z7G8 4022 aa5.41□□□□□ -1.54
HDAC9-216ENST00000446646 FAM240BA0A1B0GVZ2 78 aa5.41□□□□□ -1.54
HDAC9-216ENST00000446646 CCDC160A6NGH7 325 aa5.41□□□□□ -1.54
HDAC9-216ENST00000446646 C15orf65H3BRN8 121 aa5.41□□□□□ -1.54
HDAC9-216ENST00000446646 BUB1B-PAK6H3BSN5 160 aa5.41□□□□□ -1.54
HDAC9-216ENST00000446646 M0QZK8 103 aa5.41□□□□□ -1.54
HDAC9-216ENST00000446646 MFNGO00587 321 aa5.41□□□□□ -1.54
HDAC9-216ENST00000446646 HSD17B6O14756 317 aa5.41□□□□□ -1.54
HDAC9-216ENST00000446646 SOCS1O15524 211 aa5.41□□□□□ -1.54
HDAC9-216ENST00000446646 MMP23AO75900 390 aa5.41□□□□□ -1.54
HDAC9-216ENST00000446646 OR2F2O95006 317 aa5.41□□□□□ -1.54
HDAC9-216ENST00000446646 NAPSAO96009 420 aa5.41□□□□□ -1.54
HDAC9-216ENST00000446646 GAPDHP04406 335 aaKnown RBP5.41□□□□□ -1.54
HDAC9-216ENST00000446646 CTXN2P0C2S0 81 aa5.41□□□□□ -1.54
HDAC9-216ENST00000446646 FAM106CPP0CH98 169 aa5.41□□□□□ -1.54
HDAC9-216ENST00000446646 CGB3P0DN86 165 aa5.41□□□□□ -1.54
HDAC9-216ENST00000446646 CGB7P0DN87 165 aa5.41□□□□□ -1.54
HDAC9-216ENST00000446646 GNB3P16520 340 aa5.41□□□□□ -1.54
HDAC9-216ENST00000446646 BCAP31P51572 246 aa5.41□□□□□ -1.54
HDAC9-216ENST00000446646 TMBIM6P55061 237 aa5.41□□□□□ -1.54
HDAC9-216ENST00000446646 NCS1P62166 190 aa5.41□□□□□ -1.54
HDAC9-216ENST00000446646 EWSR1Q01844 656 aaKnown RBP eCLIP5.41□□□□□ -1.54
HDAC9-216ENST00000446646 HMGN3Q15651 99 aa5.41□□□□□ -1.54
HDAC9-216ENST00000446646 PNLIPRP3Q17RR3 467 aa5.41□□□□□ -1.54
HDAC9-216ENST00000446646 TMEM69Q5SWH9 247 aa5.41□□□□□ -1.54
HDAC9-216ENST00000446646 UTF1Q5T230 341 aa5.41□□□□□ -1.54
HDAC9-216ENST00000446646 C16orf82Q7Z2V1 217 aa5.41□□□□□ -1.54
HDAC9-216ENST00000446646 NR2C2APQ86WQ0 139 aa5.41□□□□□ -1.54
HDAC9-216ENST00000446646 LINC00311Q8N616 119 aa5.41□□□□□ -1.54
HDAC9-216ENST00000446646 OR4A4PQ8NGN8 299 aa5.41□□□□□ -1.54
HDAC9-216ENST00000446646 OR8U1Q8NH10 309 aa5.41□□□□□ -1.54
HDAC9-216ENST00000446646 C15orf40Q8WUR7 153 aa5.41□□□□□ -1.54
HDAC9-216ENST00000446646 GINS4Q9BRT9 223 aa5.41□□□□□ -1.54
HDAC9-216ENST00000446646 DCSTAMPQ9H295 470 aa5.41□□□□□ -1.54
HDAC9-216ENST00000446646 RNF167Q9H6Y7 350 aa5.41□□□□□ -1.54
HDAC9-216ENST00000446646 IFT46Q9NQC8 304 aa5.41□□□□□ -1.54
HDAC9-216ENST00000446646 ZNF581Q9P0T4 197 aa5.41□□□□□ -1.54
HDAC9-216ENST00000446646 PIPOXQ9P0Z9 390 aa5.41□□□□□ -1.54
HDAC9-216ENST00000446646 PSG11Q9UQ72 335 aa5.41□□□□□ -1.54
HDAC9-216ENST00000446646 RBM7Q9Y580 266 aaKnown RBP5.41□□□□□ -1.54
HDAC9-216ENST00000446646 A0A0A6YYD4 124 aa5.4□□□□□ -1.54
HDAC9-216ENST00000446646 IGHV3-43A0A0B4J1X8 118 aa5.4□□□□□ -1.54
HDAC9-216ENST00000446646 TRAV39A0A0B4J263 110 aa5.4□□□□□ -1.54
HDAC9-216ENST00000446646 FAM25AB3EWG3 89 aa5.4□□□□□ -1.54
HDAC9-216ENST00000446646 FAM25CB3EWG5 89 aa5.4□□□□□ -1.54
HDAC9-216ENST00000446646 FAM25GB3EWG6 89 aa5.4□□□□□ -1.54
HDAC9-216ENST00000446646 TRDCB7Z8K6 153 aa5.4□□□□□ -1.54
HDAC9-216ENST00000446646 RAB27BO00194 218 aa5.4□□□□□ -1.54
HDAC9-216ENST00000446646 FABP7O15540 132 aa5.4□□□□□ -1.54
HDAC9-216ENST00000446646 YPEL1O60688 119 aa5.4□□□□□ -1.54
HDAC9-216ENST00000446646 DFFBO76075 338 aa5.4□□□□□ -1.54
HDAC9-216ENST00000446646 IGLV1-47P01700 117 aa5.4□□□□□ -1.54
HDAC9-216ENST00000446646 FCGR3AP08637 254 aa5.4□□□□□ -1.54
HDAC9-216ENST00000446646 IGHV3-43DP0DP04 118 aa5.4□□□□□ -1.54
HDAC9-216ENST00000446646 GYPEP15421 78 aa5.4□□□□□ -1.54
HDAC9-216ENST00000446646 ZNF182P17025 639 aaPredicted RBP5.4□□□□□ -1.54
HDAC9-216ENST00000446646 RCC1P18754 421 aaPredicted RBP5.4□□□□□ -1.54
HDAC9-216ENST00000446646 SLC6A1P30531 599 aa5.4□□□□□ -1.54
HDAC9-216ENST00000446646 ALDH3B2P48448 385 aa5.4□□□□□ -1.54
HDAC9-216ENST00000446646 KRTAP10-2P60368 255 aa5.4□□□□□ -1.54
HDAC9-216ENST00000446646 ZNF816Q0VGE8 651 aaPredicted RBP5.4□□□□□ -1.54
HDAC9-216ENST00000446646 HES1Q14469 280 aa5.4□□□□□ -1.54
HDAC9-216ENST00000446646 RNF151Q2KHN1 245 aa5.4□□□□□ -1.54
HDAC9-216ENST00000446646 CDNFQ49AH0 187 aa5.4□□□□□ -1.54
HDAC9-216ENST00000446646 LY6G6FQ5SQ64 297 aa5.4□□□□□ -1.54
HDAC9-216ENST00000446646 TPTE2P1Q5T6R2 138 aa5.4□□□□□ -1.54
HDAC9-216ENST00000446646 HACD4Q5VWC8 232 aa5.4□□□□□ -1.54
HDAC9-216ENST00000446646 PYHIN1Q6K0P9 492 aa5.4□□□□□ -1.54
HDAC9-216ENST00000446646 FAM71F2Q6NXP2 309 aa5.4□□□□□ -1.54
HDAC9-216ENST00000446646 SLC25A48Q6ZT89 311 aaKnown RBP5.4□□□□□ -1.54
HDAC9-216ENST00000446646 TGIF2LXQ8IUE1 241 aa5.4□□□□□ -1.54
HDAC9-216ENST00000446646 CLVS1Q8IUQ0 354 aaPredicted RBP5.4□□□□□ -1.54
HDAC9-216ENST00000446646 SAMD12Q8N8I0 201 aa5.4□□□□□ -1.54
HDAC9-216ENST00000446646 OR10V1Q8NGI7 309 aa5.4□□□□□ -1.54
HDAC9-216ENST00000446646 OR1L1Q8NH94 360 aa5.4□□□□□ -1.54
HDAC9-216ENST00000446646 OR10J5Q8NHC4 309 aa5.4□□□□□ -1.54
HDAC9-216ENST00000446646 DCUN1D4Q92564 292 aa5.4□□□□□ -1.54
HDAC9-216ENST00000446646 YPEL2Q96QA6 119 aa5.4□□□□□ -1.54
HDAC9-216ENST00000446646 S1PR3Q99500 378 aa5.4□□□□□ -1.54
HDAC9-216ENST00000446646 ST6GALNAC5Q9BVH7 336 aa5.4□□□□□ -1.54
HDAC9-216ENST00000446646 C1orf43Q9BWL3 253 aa5.4□□□□□ -1.54
HDAC9-216ENST00000446646 ABCG5Q9H222 651 aa5.4□□□□□ -1.54
HDAC9-216ENST00000446646 GNB4Q9HAV0 340 aa5.4□□□□□ -1.54
HDAC9-216ENST00000446646 Q9N2K0 584 aa5.4□□□□□ -1.54
HDAC9-216ENST00000446646 COMMD3Q9UBI1 195 aa5.4□□□□□ -1.54
HDAC9-216ENST00000446646 SLC23A1Q9UHI7 598 aa5.4□□□□□ -1.54
HDAC9-216ENST00000446646 ZNF221Q9UK13 617 aa5.4□□□□□ -1.54
HDAC9-216ENST00000446646 TRAV18A0A075B6X5 111 aa5.39□□□□□ -1.55
HDAC9-216ENST00000446646 A0A1W2PPV4 95 aa5.39□□□□□ -1.55
HDAC9-216ENST00000446646 TMEM235A6NFC5 223 aa5.39□□□□□ -1.55
HDAC9-216ENST00000446646 GAGE10A6NGK3 116 aa5.39□□□□□ -1.55
HDAC9-216ENST00000446646 FOXI3A8MTJ6 420 aaPredicted RBP5.39□□□□□ -1.55
HDAC9-216ENST00000446646 ITGB1BP1O14713 200 aa5.39□□□□□ -1.55
HDAC9-216ENST00000446646 RAB29O14966 203 aa5.39□□□□□ -1.55
HDAC9-216ENST00000446646 BET1O15155 118 aa5.39□□□□□ -1.55
HDAC9-216ENST00000446646 RGS5O15539 181 aa5.39□□□□□ -1.55
HDAC9-216ENST00000446646 XRCC3O43542 346 aa5.39□□□□□ -1.55
HDAC9-216ENST00000446646 SAP30O75446 220 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms