RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 ENDOGQ14249 297 aaKnown RBP2.73□□□□□ -1.97
HMGB1P48-201ENST00000446155 ACOT6Q3I5F7 207 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P48-201ENST00000446155 ZCWPW2Q504Y3 356 aa2.73□□□□□ -1.97
HMGB1P48-201ENST00000446155 C1orf194Q5T5A4 169 aa2.73□□□□□ -1.97
HMGB1P48-201ENST00000446155 Q6P435 159 aa2.73□□□□□ -1.97
HMGB1P48-201ENST00000446155 ALKAL1Q6UXT8 129 aa2.73□□□□□ -1.97
HMGB1P48-201ENST00000446155 FER1L6-AS1Q8NA97 138 aa2.73□□□□□ -1.97
HMGB1P48-201ENST00000446155 PXT1Q8NFP0 134 aa2.73□□□□□ -1.97
HMGB1P48-201ENST00000446155 YIPF5Q969M3 257 aa2.73□□□□□ -1.97
HMGB1P48-201ENST00000446155 PRRT1Q99946 306 aa2.73□□□□□ -1.97
HMGB1P48-201ENST00000446155 ZNF230Q9UIE0 474 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P48-201ENST00000446155 DNAJC12Q9UKB3 198 aa2.73□□□□□ -1.97
HMGB1P48-201ENST00000446155 SCN11AQ9UI33 1791 aa2.73□□□□□ -1.97
HMGB1P48-201ENST00000446155 TONSLQ96HA7 1378 aa2.73□□□□□ -1.97
HMGB1P48-201ENST00000446155 ZBED9Q6R2W3 1325 aa2.72□□□□□ -1.97
HMGB1P48-201ENST00000446155 MRC1P22897 1456 aa2.72□□□□□ -1.97
HMGB1P48-201ENST00000446155 IGHV3OR15-7A0A075B7D8 119 aa2.72□□□□□ -1.97
HMGB1P48-201ENST00000446155 LEUTXA8MZ59 168 aa2.72□□□□□ -1.97
HMGB1P48-201ENST00000446155 IGLL5B9A064 214 aa2.72□□□□□ -1.97
HMGB1P48-201ENST00000446155 DISC1C4P0D8 188 aa2.72□□□□□ -1.97
HMGB1P48-201ENST00000446155 EEF1E1-BLOC1S5C9J1V9 151 aa2.72□□□□□ -1.97
HMGB1P48-201ENST00000446155 PSMD12O00232 456 aaPredicted RBP2.72□□□□□ -1.97
HMGB1P48-201ENST00000446155 ZNF609O15014 1411 aa2.72□□□□□ -1.97
HMGB1P48-201ENST00000446155 EEF1E1O43324 174 aaKnown RBP2.72□□□□□ -1.97
HMGB1P48-201ENST00000446155 MED6O75586 246 aa2.72□□□□□ -1.97
HMGB1P48-201ENST00000446155 IGLV3-27P01718 113 aa2.72□□□□□ -1.97
HMGB1P48-201ENST00000446155 CST2P09228 141 aa2.72□□□□□ -1.97
HMGB1P48-201ENST00000446155 CCL5P13501 91 aa2.72□□□□□ -1.97
HMGB1P48-201ENST00000446155 CDK2P24941 298 aa2.72□□□□□ -1.97
HMGB1P48-201ENST00000446155 MPV17P39210 176 aa2.72□□□□□ -1.97
HMGB1P48-201ENST00000446155 PTGES3Q15185 160 aaKnown RBP2.72□□□□□ -1.97
HMGB1P48-201ENST00000446155 PDGFRLQ15198 375 aa2.72□□□□□ -1.97
HMGB1P48-201ENST00000446155 SNCBQ16143 134 aa2.72□□□□□ -1.97
HMGB1P48-201ENST00000446155 SBSNQ6UWP8 590 aa2.72□□□□□ -1.97
HMGB1P48-201ENST00000446155 UNQ9165/PRO28630Q6UXU0 137 aa2.72□□□□□ -1.97
HMGB1P48-201ENST00000446155 NAV2Q8IVL1 2488 aa2.72□□□□□ -1.97
HMGB1P48-201ENST00000446155 TMEM105Q8N8V8 129 aa2.72□□□□□ -1.97
HMGB1P48-201ENST00000446155 OR10X1Q8NGY0 326 aa2.72□□□□□ -1.97
HMGB1P48-201ENST00000446155 RBPMSQ93062 196 aaKnown RBP2.72□□□□□ -1.97
HMGB1P48-201ENST00000446155 DCUN1D1Q96GG9 259 aa2.72□□□□□ -1.97
HMGB1P48-201ENST00000446155 OR52E6Q96RD3 313 aa2.72□□□□□ -1.97
HMGB1P48-201ENST00000446155 PHB2Q99623 299 aa2.72□□□□□ -1.97
HMGB1P48-201ENST00000446155 B9D2Q9BPU9 175 aa2.72□□□□□ -1.97
HMGB1P48-201ENST00000446155 VCXQ9H320 206 aa2.72□□□□□ -1.97
HMGB1P48-201ENST00000446155 ZNF286AQ9HBT8 521 aa2.72□□□□□ -1.97
HMGB1P48-201ENST00000446155 INIPQ9NRY2 104 aa2.72□□□□□ -1.97
HMGB1P48-201ENST00000446155 ZNF586Q9NXT0 402 aa2.72□□□□□ -1.97
HMGB1P48-201ENST00000446155 TAS2R1Q9NYW7 299 aa2.72□□□□□ -1.97
HMGB1P48-201ENST00000446155 NRXN2Q9P2S2 1712 aa2.72□□□□□ -1.97
HMGB1P48-201ENST00000446155 PRELID3BQ9Y3B1 194 aa2.72□□□□□ -1.97
HMGB1P48-201ENST00000446155 FIS1Q9Y3D6 152 aa2.72□□□□□ -1.97
HMGB1P48-201ENST00000446155 FAM208AQ9UK61 1670 aaKnown RBP2.72□□□□□ -1.97
HMGB1P48-201ENST00000446155 AKAP11Q9UKA4 1901 aa2.72□□□□□ -1.97
HMGB1P48-201ENST00000446155 LAMB4A4D0S4 1761 aa2.72□□□□□ -1.97
HMGB1P48-201ENST00000446155 ZFYVE26Q68DK2 2539 aa2.71□□□□□ -1.98
HMGB1P48-201ENST00000446155 CABIN1Q9Y6J0 2220 aa2.71□□□□□ -1.98
HMGB1P48-201ENST00000446155 TMED7-TICAM2A0A0A6YYA0 188 aa2.71□□□□□ -1.98
HMGB1P48-201ENST00000446155 ZNF850A8MQ14 1090 aa2.71□□□□□ -1.98
HMGB1P48-201ENST00000446155 M0R381 172 aa2.71□□□□□ -1.98
HMGB1P48-201ENST00000446155 NOS1APO75052 506 aaPredicted RBP2.71□□□□□ -1.98
HMGB1P48-201ENST00000446155 GPR75O95800 540 aa2.71□□□□□ -1.98
HMGB1P48-201ENST00000446155 PDYNP01213 254 aa2.71□□□□□ -1.98
HMGB1P48-201ENST00000446155 IL4P05112 153 aa2.71□□□□□ -1.98
HMGB1P48-201ENST00000446155 FABP1P07148 127 aa2.71□□□□□ -1.98
HMGB1P48-201ENST00000446155 FAM228BP0C875 321 aa2.71□□□□□ -1.98
HMGB1P48-201ENST00000446155 CGB3P0DN86 165 aa2.71□□□□□ -1.98
HMGB1P48-201ENST00000446155 CGB7P0DN87 165 aa2.71□□□□□ -1.98
HMGB1P48-201ENST00000446155 NPY1RP25929 384 aa2.71□□□□□ -1.98
HMGB1P48-201ENST00000446155 GABRA3P34903 492 aa2.71□□□□□ -1.98
HMGB1P48-201ENST00000446155 TGFBR2P37173 567 aa2.71□□□□□ -1.98
HMGB1P48-201ENST00000446155 GZMMP51124 257 aa2.71□□□□□ -1.98
HMGB1P48-201ENST00000446155 DEFA6Q01524 100 aa2.71□□□□□ -1.98
HMGB1P48-201ENST00000446155 SLC9A3R2Q15599 337 aa2.71□□□□□ -1.98
HMGB1P48-201ENST00000446155 FAM201AQ5SY85 155 aa2.71□□□□□ -1.98
HMGB1P48-201ENST00000446155 TMEM42Q69YG0 159 aa2.71□□□□□ -1.98
HMGB1P48-201ENST00000446155 DAZ4Q86SG3 579 aaKnown RBP2.71□□□□□ -1.98
HMGB1P48-201ENST00000446155 DEFB125Q8N687 156 aa2.71□□□□□ -1.98
HMGB1P48-201ENST00000446155 SLC25A44Q96H78 314 aaPredicted RBP2.71□□□□□ -1.98
HMGB1P48-201ENST00000446155 PYURFQ96I23 114 aa2.71□□□□□ -1.98
HMGB1P48-201ENST00000446155 SIGMAR1Q99720 223 aa2.71□□□□□ -1.98
HMGB1P48-201ENST00000446155 KRTAP4-4Q9BYR3 166 aa2.71□□□□□ -1.98
HMGB1P48-201ENST00000446155 DCSTAMPQ9H295 470 aa2.71□□□□□ -1.98
HMGB1P48-201ENST00000446155 DAZ1Q9NQZ3 744 aaKnown RBP2.71□□□□□ -1.98
HMGB1P48-201ENST00000446155 KCNIP2Q9NS61 270 aa2.71□□□□□ -1.98
HMGB1P48-201ENST00000446155 ZNF391Q9UJN7 358 aa2.71□□□□□ -1.98
HMGB1P48-201ENST00000446155 WASHC3Q9Y3C0 194 aa2.71□□□□□ -1.98
HMGB1P48-201ENST00000446155 V9GYQ6 96 aa2.71□□□□□ -1.98
HMGB1P48-201ENST00000446155 RBBP6Q7Z6E9 1792 aaKnown RBP2.71□□□□□ -1.98
HMGB1P48-201ENST00000446155 DLEC1Q9Y238 1755 aa2.71□□□□□ -1.98
HMGB1P48-201ENST00000446155 RTL1A6NKG5 1358 aa2.71□□□□□ -1.98
HMGB1P48-201ENST00000446155 SCN1AP35498 2009 aa2.71□□□□□ -1.98
HMGB1P48-201ENST00000446155 GCN1Q92616 2671 aaKnown RBP2.71□□□□□ -1.98
HMGB1P48-201ENST00000446155 CACNA1HO95180 2353 aa2.71□□□□□ -1.98
HMGB1P48-201ENST00000446155 CHD7Q9P2D1 2997 aa2.7□□□□□ -1.98
HMGB1P48-201ENST00000446155 USP9XQ93008 2570 aaPredicted RBP2.7□□□□□ -1.98
HMGB1P48-201ENST00000446155 PCM1Q15154 2024 aa2.7□□□□□ -1.98
HMGB1P48-201ENST00000446155 IGKV1-12A0A0C4DH73 117 aa2.7□□□□□ -1.98
HMGB1P48-201ENST00000446155 A0A1B0GV50 99 aa2.7□□□□□ -1.98
HMGB1P48-201ENST00000446155 PGRMC1O00264 195 aaKnown RBP2.7□□□□□ -1.98
HMGB1P48-201ENST00000446155 BET1O15155 118 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms