RNA–Protein interactions for RNA: ENST00000445064.1

SEC13-213, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, human

TSL 5

Gene SEC13, Length 669 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC13-213	ENST00000445064	BRWD1-AS2	P59051	145 aa		11.64	□□□□□ -0.55
SEC13-213	ENST00000445064	CNIH2	Q6PI25	160 aa		11.64	□□□□□ -0.55
SEC13-213	ENST00000445064	LAX1	Q8IWV1	398 aa		11.64	□□□□□ -0.55
SEC13-213	ENST00000445064	MFSD4A	Q8N468	514 aa		11.64	□□□□□ -0.55
SEC13-213	ENST00000445064	TMEM167A	Q8TBQ9	72 aa		11.64	□□□□□ -0.55
SEC13-213	ENST00000445064	TCTEX1D2	Q8WW35	142 aa		11.64	□□□□□ -0.55
SEC13-213	ENST00000445064	WDR89	Q96FK6	387 aa	Predicted RBP	11.64	□□□□□ -0.55
SEC13-213	ENST00000445064	OR2A7	Q96R45	310 aa		11.64	□□□□□ -0.55
SEC13-213	ENST00000445064	GPHA2	Q96T91	129 aa		11.64	□□□□□ -0.55
SEC13-213	ENST00000445064	BLOC1S6	Q9UL45	172 aa		11.64	□□□□□ -0.55
SEC13-213	ENST00000445064	ZNF257	Q9Y2Q1	563 aa		11.64	□□□□□ -0.55
SEC13-213	ENST00000445064	TNC	P24821	2201 aa		11.64	□□□□□ -0.55
SEC13-213	ENST00000445064		A0A1B0GW64	132 aa		11.63	□□□□□ -0.55
SEC13-213	ENST00000445064	DPPA5	A6NC42	116 aa		11.63	□□□□□ -0.55
SEC13-213	ENST00000445064	NOTO	A8MTQ0	251 aa		11.63	□□□□□ -0.55
SEC13-213	ENST00000445064	SSX5	O60225	188 aa		11.63	□□□□□ -0.55
SEC13-213	ENST00000445064	KBTBD11	O94819	623 aa		11.63	□□□□□ -0.55
SEC13-213	ENST00000445064	RPL27A	P46776	148 aa	Known RBP	11.63	□□□□□ -0.55
SEC13-213	ENST00000445064	EIF4EBP1	Q13541	118 aa	Predicted RBP	11.63	□□□□□ -0.55
SEC13-213	ENST00000445064	CLEC19A	Q6UXS0	136 aa		11.63	□□□□□ -0.55
SEC13-213	ENST00000445064	SSX9	Q7RTT3	188 aa		11.63	□□□□□ -0.55
SEC13-213	ENST00000445064	PUSL1	Q8N0Z8	303 aa	Known RBP	11.63	□□□□□ -0.55
SEC13-213	ENST00000445064	OR4S2	Q8NH73	311 aa		11.63	□□□□□ -0.55
SEC13-213	ENST00000445064	VSTM2A	Q8TAG5	236 aa		11.63	□□□□□ -0.55
SEC13-213	ENST00000445064	FANCD2OS	Q96PS1	177 aa		11.63	□□□□□ -0.55
SEC13-213	ENST00000445064	HSD17B10	Q99714	261 aa	Known RBP	11.63	□□□□□ -0.55
SEC13-213	ENST00000445064	VCX3B	Q9H321	246 aa		11.63	□□□□□ -0.55
SEC13-213	ENST00000445064	SRD5A3	Q9H8P0	318 aa		11.63	□□□□□ -0.55
SEC13-213	ENST00000445064	SLC2A9	Q9NRM0	540 aa		11.63	□□□□□ -0.55
SEC13-213	ENST00000445064	TXNL4B	Q9NX01	149 aa	Known RBP	11.63	□□□□□ -0.55
SEC13-213	ENST00000445064	TAS2R8	Q9NYW2	309 aa		11.63	□□□□□ -0.55
SEC13-213	ENST00000445064	DAPK2	Q9UIK4	370 aa		11.63	□□□□□ -0.55
SEC13-213	ENST00000445064	ANXA10	Q9UJ72	324 aa		11.63	□□□□□ -0.55
SEC13-213	ENST00000445064	CSMD3	Q7Z407	3707 aa		11.62	□□□□□ -0.55
SEC13-213	ENST00000445064	NPIPB5	A8MRT5	1133 aa		11.62	□□□□□ -0.55
SEC13-213	ENST00000445064	LGALS9	O00182	355 aa		11.62	□□□□□ -0.55
SEC13-213	ENST00000445064	MYOD1	P15172	320 aa		11.62	□□□□□ -0.55
SEC13-213	ENST00000445064	AREG	P15514	252 aa		11.62	□□□□□ -0.55
SEC13-213	ENST00000445064	CBLN1	P23435	193 aa		11.62	□□□□□ -0.55
SEC13-213	ENST00000445064	MAS1L	P35410	378 aa		11.62	□□□□□ -0.55
SEC13-213	ENST00000445064	ARL3	P36405	182 aa		11.62	□□□□□ -0.55
SEC13-213	ENST00000445064	GNG2	P59768	71 aa		11.62	□□□□□ -0.55
SEC13-213	ENST00000445064	FAM209B	Q5JX69	171 aa		11.62	□□□□□ -0.55
SEC13-213	ENST00000445064	GPHB5	Q86YW7	130 aa		11.62	□□□□□ -0.55
SEC13-213	ENST00000445064	CACNG8	Q8WXS5	425 aa		11.62	□□□□□ -0.55
SEC13-213	ENST00000445064	ZC4H2	Q9NQZ6	224 aa		11.62	□□□□□ -0.55
SEC13-213	ENST00000445064	TECR	Q9NZ01	308 aa	Known RBP	11.62	□□□□□ -0.55
SEC13-213	ENST00000445064	ZNF320	A2RRD8	509 aa		11.61	□□□□□ -0.55
SEC13-213	ENST00000445064	TNFSF12	O43508	249 aa		11.61	□□□□□ -0.55
SEC13-213	ENST00000445064	REG1A	P05451	166 aa		11.61	□□□□□ -0.55
SEC13-213	ENST00000445064	CRYGC	P07315	174 aa		11.61	□□□□□ -0.55
SEC13-213	ENST00000445064	ZNF735	P0CB33	412 aa		11.61	□□□□□ -0.55
SEC13-213	ENST00000445064	PTHLH	P12272	177 aa		11.61	□□□□□ -0.55
SEC13-213	ENST00000445064	PSMB6	P28072	239 aa		11.61	□□□□□ -0.55
SEC13-213	ENST00000445064	FGF9	P31371	208 aa	Predicted RBP	11.61	□□□□□ -0.55
SEC13-213	ENST00000445064	HSPA13	P48723	471 aa		11.61	□□□□□ -0.55
SEC13-213	ENST00000445064	ZNF66	Q6ZN08	573 aa		11.61	□□□□□ -0.55
SEC13-213	ENST00000445064	IL17D	Q8TAD2	202 aa		11.61	□□□□□ -0.55
SEC13-213	ENST00000445064	CCDC140	Q96MF4	163 aa		11.61	□□□□□ -0.55
SEC13-213	ENST00000445064	CCL28	Q9NRJ3	127 aa		11.61	□□□□□ -0.55
SEC13-213	ENST00000445064	RRP15	Q9Y3B9	282 aa	Known RBP	11.61	□□□□□ -0.55
SEC13-213	ENST00000445064	SACS	Q9NZJ4	4579 aa		11.6	□□□□□ -0.55
SEC13-213	ENST00000445064	HRAS	P01112	189 aa		11.6	□□□□□ -0.55
SEC13-213	ENST00000445064	PSMB9	P28065	219 aa		11.6	□□□□□ -0.55
SEC13-213	ENST00000445064	UBE2U	Q5VVX9	321 aa		11.6	□□□□□ -0.55
SEC13-213	ENST00000445064	TPRA1	Q86W33	373 aa		11.6	□□□□□ -0.55
SEC13-213	ENST00000445064	SPART	Q8N0X7	666 aa		11.6	□□□□□ -0.55
SEC13-213	ENST00000445064	LGALS14	Q8TCE9	139 aa		11.6	□□□□□ -0.55
SEC13-213	ENST00000445064	SECTM1	Q8WVN6	248 aa		11.6	□□□□□ -0.55
SEC13-213	ENST00000445064	CGB1	A6NKQ9	187 aa		11.59	□□□□□ -0.55
SEC13-213	ENST00000445064	SCGN	O76038	276 aa		11.59	□□□□□ -0.55
SEC13-213	ENST00000445064	DHFR	P00374	187 aa		11.59	□□□□□ -0.55
SEC13-213	ENST00000445064	DEFA4	P12838	97 aa		11.59	□□□□□ -0.55
SEC13-213	ENST00000445064	CTRB1	P17538	263 aa		11.59	□□□□□ -0.55
SEC13-213	ENST00000445064	FCGR2C	P31995	323 aa		11.59	□□□□□ -0.55
SEC13-213	ENST00000445064	RPL8	P62917	257 aa	Known RBP	11.59	□□□□□ -0.55
SEC13-213	ENST00000445064	FAM106A	Q4KMX7	169 aa		11.59	□□□□□ -0.55
SEC13-213	ENST00000445064	ZNF57	Q68EA5	555 aa	Predicted RBP	11.59	□□□□□ -0.55
SEC13-213	ENST00000445064	CTRB2	Q6GPI1	263 aa		11.59	□□□□□ -0.55
SEC13-213	ENST00000445064	TMEM61	Q8N0U2	210 aa		11.59	□□□□□ -0.55
SEC13-213	ENST00000445064	GVQW1	Q8N7I0	195 aa		11.59	□□□□□ -0.55
SEC13-213	ENST00000445064	UXS1	Q8NBZ7	420 aa		11.59	□□□□□ -0.55
SEC13-213	ENST00000445064	EEF1AKMT3	Q96AZ1	226 aa		11.59	□□□□□ -0.55
SEC13-213	ENST00000445064	LYST	Q99698	3801 aa		11.59	□□□□□ -0.55
SEC13-213	ENST00000445064	MLX	Q9UH92	298 aa		11.59	□□□□□ -0.55
SEC13-213	ENST00000445064	RAB26	Q9ULW5	256 aa		11.59	□□□□□ -0.55
SEC13-213	ENST00000445064	SSR3	Q9UNL2	185 aa		11.59	□□□□□ -0.55
SEC13-213	ENST00000445064	STARD9	Q9P2P6	4700 aa		11.58	□□□□□ -0.55
SEC13-213	ENST00000445064	TRAV18	A0A075B6X5	111 aa		11.58	□□□□□ -0.56
SEC13-213	ENST00000445064	TMEM213	A2RRL7	107 aa		11.58	□□□□□ -0.56
SEC13-213	ENST00000445064	MRPS14	O60783	128 aa	Known RBP	11.58	□□□□□ -0.56
SEC13-213	ENST00000445064	JTB	O76095	146 aa		11.58	□□□□□ -0.56
SEC13-213	ENST00000445064	SCAF4	O95104	1147 aa	Known RBP	11.58	□□□□□ -0.56
SEC13-213	ENST00000445064	CLEC3B	P05452	202 aa		11.58	□□□□□ -0.56
SEC13-213	ENST00000445064	FCER2	P06734	321 aa		11.58	□□□□□ -0.56
SEC13-213	ENST00000445064	CLEC2L	P0C7M8	214 aa		11.58	□□□□□ -0.56
SEC13-213	ENST00000445064	HIST1H1B	P16401	226 aa	Known RBP	11.58	□□□□□ -0.56
SEC13-213	ENST00000445064	HLA-G	P17693	338 aa		11.58	□□□□□ -0.56
SEC13-213	ENST00000445064	ARPC4	P59998	168 aa		11.58	□□□□□ -0.56
SEC13-213	ENST00000445064	GABARAPL2	P60520	117 aa		11.58	□□□□□ -0.56

Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms