RNA–Protein interactions for RNA: ENST00000443443.1

VPS50-206, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-206ENST00000443443 RTN4IP1Q8WWV3 396 aaPredicted RBP3.22□□□□□ -1.89
VPS50-206ENST00000443443 SLC7A6Q92536 515 aa3.22□□□□□ -1.89
VPS50-206ENST00000443443 FAM104AQ969W3 186 aa3.22□□□□□ -1.89
VPS50-206ENST00000443443 ISOC1Q96CN7 298 aa3.22□□□□□ -1.89
VPS50-206ENST00000443443 IGF2BP2-AS1Q96M15 143 aa3.22□□□□□ -1.89
VPS50-206ENST00000443443 IP6K3Q96PC2 410 aa3.22□□□□□ -1.89
VPS50-206ENST00000443443 OR2A5Q96R48 311 aa3.22□□□□□ -1.89
VPS50-206ENST00000443443 CAMK2N2Q96S95 79 aa3.22□□□□□ -1.89
VPS50-206ENST00000443443 LXNQ9BS40 222 aa3.22□□□□□ -1.89
VPS50-206ENST00000443443 GGTLC1Q9BX51 225 aa3.22□□□□□ -1.89
VPS50-206ENST00000443443 SMIM3Q9BZL3 60 aa3.22□□□□□ -1.89
VPS50-206ENST00000443443 OR2H1Q9GZK4 316 aa3.22□□□□□ -1.89
VPS50-206ENST00000443443 IMUPQ9GZP8 106 aa3.22□□□□□ -1.89
VPS50-206ENST00000443443 FBXL12Q9NXK8 326 aa3.22□□□□□ -1.89
VPS50-206ENST00000443443 TAAR3PQ9P1P4 343 aa3.22□□□□□ -1.89
VPS50-206ENST00000443443 NUFIP1Q9UHK0 495 aaKnown RBP3.22□□□□□ -1.89
VPS50-206ENST00000443443 RPUSD1Q9UJJ7 312 aaKnown RBP3.22□□□□□ -1.89
VPS50-206ENST00000443443 TRAPPC2LQ9UL33 140 aa3.22□□□□□ -1.89
VPS50-206ENST00000443443 CYSLTR1Q9Y271 337 aa3.22□□□□□ -1.89
VPS50-206ENST00000443443 HEY1Q9Y5J3 304 aa3.22□□□□□ -1.89
VPS50-206ENST00000443443 DENND4BO75064 1496 aaPredicted RBP3.22□□□□□ -1.89
VPS50-206ENST00000443443 HECW2Q9P2P5 1572 aa3.21□□□□□ -1.89
VPS50-206ENST00000443443 ATRNO75882 1429 aa3.21□□□□□ -1.9
VPS50-206ENST00000443443 LRRK1Q38SD2 2015 aa3.21□□□□□ -1.9
VPS50-206ENST00000443443 IGHV1-45A0A0A0MS14 117 aa3.21□□□□□ -1.9
VPS50-206ENST00000443443 TMEM269A0A1B0GVZ9 245 aa3.21□□□□□ -1.9
VPS50-206ENST00000443443 C9JAW5 83 aa3.21□□□□□ -1.9
VPS50-206ENST00000443443 OR7C2O60412 319 aa3.21□□□□□ -1.9
VPS50-206ENST00000443443 SCO1O75880 301 aa3.21□□□□□ -1.9
VPS50-206ENST00000443443 OR2H2O95918 312 aa3.21□□□□□ -1.9
VPS50-206ENST00000443443 OPN1SWP03999 348 aa3.21□□□□□ -1.9
VPS50-206ENST00000443443 SMIM10L2AP0DMW4 78 aa3.21□□□□□ -1.9
VPS50-206ENST00000443443 SMIM10L2BP0DMW5 78 aa3.21□□□□□ -1.9
VPS50-206ENST00000443443 S100A2P29034 98 aa3.21□□□□□ -1.9
VPS50-206ENST00000443443 GABRA2P47869 451 aa3.21□□□□□ -1.9
VPS50-206ENST00000443443 NUDT2P50583 147 aa3.21□□□□□ -1.9
VPS50-206ENST00000443443 TAS2R30P59541 319 aa3.21□□□□□ -1.9
VPS50-206ENST00000443443 NCS1P62166 190 aa3.21□□□□□ -1.9
VPS50-206ENST00000443443 HOXC5Q00444 222 aa3.21□□□□□ -1.9
VPS50-206ENST00000443443 HIST1H1AQ02539 215 aaPredicted RBP3.21□□□□□ -1.9
VPS50-206ENST00000443443 LOXL1Q08397 574 aaPredicted RBP3.21□□□□□ -1.9
VPS50-206ENST00000443443 TMEM183BQ1AE95 376 aa3.21□□□□□ -1.9
VPS50-206ENST00000443443 TNFAIP8L3Q5GJ75 292 aa3.21□□□□□ -1.9
VPS50-206ENST00000443443 LYPD2Q6UXB3 125 aa3.21□□□□□ -1.9
VPS50-206ENST00000443443 KRTAP5-5Q701N2 237 aaPredicted RBP3.21□□□□□ -1.9
VPS50-206ENST00000443443 MARCH3Q86UD3 253 aa3.21□□□□□ -1.9
VPS50-206ENST00000443443 TMEM183AQ8IXX5 376 aa3.21□□□□□ -1.9
VPS50-206ENST00000443443 MKXQ8IYA7 352 aa3.21□□□□□ -1.9
VPS50-206ENST00000443443 TCTE3Q8IZS6 198 aa3.21□□□□□ -1.9
VPS50-206ENST00000443443 ZDHHC22Q8N966 263 aa3.21□□□□□ -1.9
VPS50-206ENST00000443443 NARS2Q96I59 477 aaKnown RBP3.21□□□□□ -1.9
VPS50-206ENST00000443443 C14orf144Q96I85 54 aa3.21□□□□□ -1.9
VPS50-206ENST00000443443 TP53RKQ96S44 253 aa3.21□□□□□ -1.9
VPS50-206ENST00000443443 ERG28Q9UKR5 140 aa3.21□□□□□ -1.9
VPS50-206ENST00000443443 HIGD1AQ9Y241 93 aa3.21□□□□□ -1.9
VPS50-206ENST00000443443 MED31Q9Y3C7 131 aa3.21□□□□□ -1.9
VPS50-206ENST00000443443 BCL9O00512 1426 aa3.2□□□□□ -1.9
VPS50-206ENST00000443443 KDM5BQ9UGL1 1544 aa3.2□□□□□ -1.9
VPS50-206ENST00000443443 TRBV20OR9-2A0A075B6H5 130 aa3.2□□□□□ -1.9
VPS50-206ENST00000443443 TRAV9-1A0A075B6T8 112 aa3.2□□□□□ -1.9
VPS50-206ENST00000443443 A0A087WUU8 490 aa3.2□□□□□ -1.9
VPS50-206ENST00000443443 TRAV5A0A0B4J249 113 aa3.2□□□□□ -1.9
VPS50-206ENST00000443443 PVALEFA0A1B0GWK0 134 aa3.2□□□□□ -1.9
VPS50-206ENST00000443443 INS-IGF2F8WCM5 200 aa3.2□□□□□ -1.9
VPS50-206ENST00000443443 COX7A2LO14548 114 aa3.2□□□□□ -1.9
VPS50-206ENST00000443443 POP7O75817 140 aaKnown RBP3.2□□□□□ -1.9
VPS50-206ENST00000443443 CXorf1O96002 111 aa3.2□□□□□ -1.9
VPS50-206ENST00000443443 IGLV3-27P01718 113 aa3.2□□□□□ -1.9
VPS50-206ENST00000443443 MAS1P04201 325 aa3.2□□□□□ -1.9
VPS50-206ENST00000443443 SCTP09683 121 aa3.2□□□□□ -1.9
VPS50-206ENST00000443443 BCL2P10415 239 aa3.2□□□□□ -1.9
VPS50-206ENST00000443443 CRISP2P16562 243 aa3.2□□□□□ -1.9
VPS50-206ENST00000443443 SRIP30626 198 aa3.2□□□□□ -1.9
VPS50-206ENST00000443443 LPAR6P43657 344 aa3.2□□□□□ -1.9
VPS50-206ENST00000443443 LINC00313P59037 77 aa3.2□□□□□ -1.9
VPS50-206ENST00000443443 ATP5G2Q06055 141 aa3.2□□□□□ -1.9
VPS50-206ENST00000443443 PLCXD2Q0VAA5 305 aa3.2□□□□□ -1.9
VPS50-206ENST00000443443 LINC00303Q3SY05 128 aa3.2□□□□□ -1.9
VPS50-206ENST00000443443 PRSS54Q6PEW0 395 aa3.2□□□□□ -1.9
VPS50-206ENST00000443443 HAGHLQ6PII5 290 aaPredicted RBP3.2□□□□□ -1.9
VPS50-206ENST00000443443 WDR59Q6PJI9 974 aa3.2□□□□□ -1.9
VPS50-206ENST00000443443 C1orf174Q8IYL3 243 aa3.2□□□□□ -1.9
VPS50-206ENST00000443443 C12orf45Q8N5I9 185 aaPredicted RBP3.2□□□□□ -1.9
VPS50-206ENST00000443443 SLC25A29Q8N8R3 303 aa3.2□□□□□ -1.9
VPS50-206ENST00000443443 MRPL30Q8TCC3 161 aaKnown RBP3.2□□□□□ -1.9
VPS50-206ENST00000443443 TRIB3Q96RU7 358 aa3.2□□□□□ -1.9
VPS50-206ENST00000443443 OR2J1Q9GZK6 312 aa3.2□□□□□ -1.9
VPS50-206ENST00000443443 WDR61Q9GZS3 305 aaKnown RBP3.2□□□□□ -1.9
VPS50-206ENST00000443443 LPAR5Q9H1C0 372 aa3.2□□□□□ -1.9
VPS50-206ENST00000443443 IFI27L2Q9H2X8 130 aa3.2□□□□□ -1.9
VPS50-206ENST00000443443 C11orf68Q9H3H3 251 aaKnown RBP3.2□□□□□ -1.9
VPS50-206ENST00000443443 PLEKHF2Q9H8W4 249 aa3.2□□□□□ -1.9
VPS50-206ENST00000443443 TMEM38BQ9NVV0 291 aa3.2□□□□□ -1.9
VPS50-206ENST00000443443 CHD2O14647 1828 aaKnown RBP3.2□□□□□ -1.9
VPS50-206ENST00000443443 IGHV1OR15-9A0A0B4J2B8 117 aa3.19□□□□□ -1.9
VPS50-206ENST00000443443 A0A0J9YY10 115 aa3.19□□□□□ -1.9
VPS50-206ENST00000443443 LOC102725191A0A1B0GVB3 256 aa3.19□□□□□ -1.9
VPS50-206ENST00000443443 A0A1B0GX78 115 aa3.19□□□□□ -1.9
VPS50-206ENST00000443443 DPRXA6NFQ7 191 aa3.19□□□□□ -1.9
VPS50-206ENST00000443443 J3QR89 54 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms