RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 IGHV1-46P01743 117 aa11.77□□□□□ -0.53
LIMD1-202ENST00000440097 TEX38Q6PEX7 206 aa11.77□□□□□ -0.53
LIMD1-202ENST00000440097 BTNL3Q6UXE8 466 aa11.77□□□□□ -0.53
LIMD1-202ENST00000440097 MBD3L1Q8WWY6 194 aa11.77□□□□□ -0.53
LIMD1-202ENST00000440097 TMEM37Q8WXS4 190 aa11.77□□□□□ -0.53
LIMD1-202ENST00000440097 RBKSQ9H477 322 aa11.77□□□□□ -0.53
LIMD1-202ENST00000440097 GNG12Q9UBI6 72 aa11.77□□□□□ -0.53
LIMD1-202ENST00000440097 DUXBA0A1W2PPF3 345 aa11.76□□□□□ -0.53
LIMD1-202ENST00000440097 DPRXA6NFQ7 191 aa11.76□□□□□ -0.53
LIMD1-202ENST00000440097 IGHV3-7P01780 117 aa11.76□□□□□ -0.53
LIMD1-202ENST00000440097 IRF2P14316 349 aa11.76□□□□□ -0.53
LIMD1-202ENST00000440097 GALR1P47211 349 aa11.76□□□□□ -0.53
LIMD1-202ENST00000440097 TLE1Q04724 770 aa11.76□□□□□ -0.53
LIMD1-202ENST00000440097 MRPL41Q8IXM3 137 aaKnown RBP11.76□□□□□ -0.53
LIMD1-202ENST00000440097 ZNF295-AS1Q8N0V1 137 aa11.76□□□□□ -0.53
LIMD1-202ENST00000440097 ZCCHC24Q8N2G6 241 aaKnown RBP11.76□□□□□ -0.53
LIMD1-202ENST00000440097 SCGB1C1Q8TD33 95 aa11.76□□□□□ -0.53
LIMD1-202ENST00000440097 PCGF1Q9BSM1 259 aa11.76□□□□□ -0.53
LIMD1-202ENST00000440097 ELOVL1Q9BW60 279 aa11.76□□□□□ -0.53
LIMD1-202ENST00000440097 GCM1Q9NP62 436 aa11.76□□□□□ -0.53
LIMD1-202ENST00000440097 NAT8Q9UHE5 227 aa11.76□□□□□ -0.53
LIMD1-202ENST00000440097 ZNF25P17030 456 aaPredicted RBP11.76□□□□□ -0.53
LIMD1-202ENST00000440097 PDLIM4P50479 330 aa11.76□□□□□ -0.53
LIMD1-202ENST00000440097 RELQ04864 619 aaPredicted RBP11.76□□□□□ -0.53
LIMD1-202ENST00000440097 ZNF645Q8N7E2 425 aa11.76□□□□□ -0.53
LIMD1-202ENST00000440097 OR51G1Q8NGK1 321 aa11.76□□□□□ -0.53
LIMD1-202ENST00000440097 ACY3Q96HD9 319 aa11.76□□□□□ -0.53
LIMD1-202ENST00000440097 RNF7Q9UBF6 113 aa11.76□□□□□ -0.53
LIMD1-202ENST00000440097 CFAP46Q8IYW2 2715 aa11.76□□□□□ -0.53
LIMD1-202ENST00000440097 A0A0G2JRQ6 117 aa11.75□□□□□ -0.53
LIMD1-202ENST00000440097 ODAMA1E959 279 aa11.75□□□□□ -0.53
LIMD1-202ENST00000440097 M0R143 59 aa11.75□□□□□ -0.53
LIMD1-202ENST00000440097 ZNF737O75373 536 aa11.75□□□□□ -0.53
LIMD1-202ENST00000440097 PRSS8Q16651 343 aa11.75□□□□□ -0.53
LIMD1-202ENST00000440097 TMEM170AQ8WVE7 144 aa11.75□□□□□ -0.53
LIMD1-202ENST00000440097 IL22RA2Q969J5 263 aa11.75□□□□□ -0.53
LIMD1-202ENST00000440097 TMEM18Q96B42 140 aa11.75□□□□□ -0.53
LIMD1-202ENST00000440097 WFIKKN1Q96NZ8 548 aa11.75□□□□□ -0.53
LIMD1-202ENST00000440097 CACNG5Q9UF02 275 aa11.75□□□□□ -0.53
LIMD1-202ENST00000440097 IL19Q9UHD0 177 aa11.75□□□□□ -0.53
LIMD1-202ENST00000440097 PSG11Q9UQ72 335 aa11.75□□□□□ -0.53
LIMD1-202ENST00000440097 FUT9Q9Y231 359 aa11.75□□□□□ -0.53
LIMD1-202ENST00000440097 SVEP1Q4LDE5 3571 aa11.75□□□□□ -0.53
LIMD1-202ENST00000440097 PIGBOS1A0A0B4J2F0 54 aa11.75□□□□□ -0.53
LIMD1-202ENST00000440097 A0A1W2PPQ1 181 aa11.75□□□□□ -0.53
LIMD1-202ENST00000440097 RNF212BA8MTL3 300 aa11.75□□□□□ -0.53
LIMD1-202ENST00000440097 SFTPCP11686 197 aa11.75□□□□□ -0.53
LIMD1-202ENST00000440097 TMEM241Q24JQ0 296 aa11.75□□□□□ -0.53
LIMD1-202ENST00000440097 TGIF2LYQ8IUE0 185 aa11.75□□□□□ -0.53
LIMD1-202ENST00000440097 GPR146Q96CH1 333 aa11.75□□□□□ -0.53
LIMD1-202ENST00000440097 OR5B12Q96R08 314 aa11.75□□□□□ -0.53
LIMD1-202ENST00000440097 USF3Q68DE3 2245 aa11.75□□□□□ -0.53
LIMD1-202ENST00000440097 H7BYZ3 331 aa11.74□□□□□ -0.53
LIMD1-202ENST00000440097 MGST3O14880 152 aa11.74□□□□□ -0.53
LIMD1-202ENST00000440097 THBDP07204 575 aa11.74□□□□□ -0.53
LIMD1-202ENST00000440097 GNB2P62879 340 aa11.74□□□□□ -0.53
LIMD1-202ENST00000440097 ZNF816Q0VGE8 651 aaPredicted RBP11.74□□□□□ -0.53
LIMD1-202ENST00000440097 IQCJQ1A5X6 159 aa11.74□□□□□ -0.53
LIMD1-202ENST00000440097 BSXQ3C1V8 233 aa11.74□□□□□ -0.53
LIMD1-202ENST00000440097 CYP2G1PQ6ZSU1 146 aa11.74□□□□□ -0.53
LIMD1-202ENST00000440097 NUP37Q8NFH4 326 aa11.74□□□□□ -0.53
LIMD1-202ENST00000440097 RPUSD4Q96CM3 377 aaKnown RBP11.74□□□□□ -0.53
LIMD1-202ENST00000440097 PPP1R14DQ9NXH3 145 aa11.74□□□□□ -0.53
LIMD1-202ENST00000440097 MAP1LC3B2A6NCE7 125 aa11.74□□□□□ -0.53
LIMD1-202ENST00000440097 CFHR2P36980 270 aa11.74□□□□□ -0.53
LIMD1-202ENST00000440097 PLA2G5P39877 138 aa11.74□□□□□ -0.53
LIMD1-202ENST00000440097 RPL23P62829 140 aaKnown RBP11.74□□□□□ -0.53
LIMD1-202ENST00000440097 FAM90A1Q86YD7 464 aa11.74□□□□□ -0.53
LIMD1-202ENST00000440097 MAP1LC3BQ9GZQ8 125 aa11.74□□□□□ -0.53
LIMD1-202ENST00000440097 KRASP01116 189 aa11.73□□□□□ -0.53
LIMD1-202ENST00000440097 IFNA1P01562 189 aa11.73□□□□□ -0.53
LIMD1-202ENST00000440097 ELLP55199 621 aaPredicted RBP11.73□□□□□ -0.53
LIMD1-202ENST00000440097 ERVFC1-1P60608 527 aa11.73□□□□□ -0.53
LIMD1-202ENST00000440097 ARL16Q0P5N6 197 aa11.73□□□□□ -0.53
LIMD1-202ENST00000440097 ADIPOQQ15848 244 aa11.73□□□□□ -0.53
LIMD1-202ENST00000440097 VKORC1Q9BQB6 163 aa11.73□□□□□ -0.53
LIMD1-202ENST00000440097 NGBQ9NPG2 151 aa11.73□□□□□ -0.53
LIMD1-202ENST00000440097 ABCA4P78363 2273 aa11.73□□□□□ -0.53
LIMD1-202ENST00000440097 FAM90A27PA6NNH2 459 aa11.73□□□□□ -0.53
LIMD1-202ENST00000440097 RAMP3O60896 148 aa11.73□□□□□ -0.53
LIMD1-202ENST00000440097 SCGB1D1O95968 90 aa11.73□□□□□ -0.53
LIMD1-202ENST00000440097 IGKV1-39P01597 117 aa11.73□□□□□ -0.53
LIMD1-202ENST00000440097 IGKV1D-39P04432 117 aa11.73□□□□□ -0.53
LIMD1-202ENST00000440097 FAM3BP58499 235 aaPredicted RBP11.73□□□□□ -0.53
LIMD1-202ENST00000440097 CATR1Q13166 79 aa11.73□□□□□ -0.53
LIMD1-202ENST00000440097 ACTL10Q5JWF8 245 aa11.73□□□□□ -0.53
LIMD1-202ENST00000440097 AGMATQ9BSE5 352 aa11.73□□□□□ -0.53
LIMD1-202ENST00000440097 KBTBD11O94819 623 aa11.73□□□□□ -0.53
LIMD1-202ENST00000440097 GYPAP02724 150 aa11.73□□□□□ -0.53
LIMD1-202ENST00000440097 METTL15P1P0C7V9 234 aa11.73□□□□□ -0.53
LIMD1-202ENST00000440097 IAPPP10997 89 aa11.73□□□□□ -0.53
LIMD1-202ENST00000440097 ZNF585BQ52M93 769 aa11.73□□□□□ -0.53
LIMD1-202ENST00000440097 TRAT1Q6PIZ9 186 aa11.73□□□□□ -0.53
LIMD1-202ENST00000440097 JKAMPQ9P055 326 aa11.73□□□□□ -0.53
LIMD1-202ENST00000440097 IGSF10Q6WRI0 2623 aa11.72□□□□□ -0.53
LIMD1-202ENST00000440097 MARCH11A6NNE9 402 aa11.72□□□□□ -0.53
LIMD1-202ENST00000440097 VSTM5A8MXK1 200 aa11.72□□□□□ -0.53
LIMD1-202ENST00000440097 RBMXL2O75526 392 aaKnown RBP11.72□□□□□ -0.53
LIMD1-202ENST00000440097 CLDN1O95832 211 aa11.72□□□□□ -0.53
LIMD1-202ENST00000440097 HRASP01112 189 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms