RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 DNASE2BQ8WZ79 361 aa9.85□□□□□ -0.83
SMPD4-209ENST00000439886 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.85□□□□□ -0.83
SMPD4-209ENST00000439886 TRANK1O15050 2925 aa9.85□□□□□ -0.83
SMPD4-209ENST00000439886 S1PR2O95136 353 aa9.85□□□□□ -0.83
SMPD4-209ENST00000439886 TFF1P04155 84 aa9.85□□□□□ -0.83
SMPD4-209ENST00000439886 P04436 131 aa9.85□□□□□ -0.83
SMPD4-209ENST00000439886 PDLIM4P50479 330 aa9.85□□□□□ -0.83
SMPD4-209ENST00000439886 GTF2H5Q6ZYL4 71 aa9.85□□□□□ -0.83
SMPD4-209ENST00000439886 CACNG8Q8WXS5 425 aa9.85□□□□□ -0.83
SMPD4-209ENST00000439886 SARAFQ96BY9 339 aa9.85□□□□□ -0.83
SMPD4-209ENST00000439886 ZNF703Q9H7S9 590 aaPredicted RBP9.85□□□□□ -0.83
SMPD4-209ENST00000439886 NRN1Q9NPD7 142 aa9.85□□□□□ -0.83
SMPD4-209ENST00000439886 DLL3Q9NYJ7 618 aa9.85□□□□□ -0.83
SMPD4-209ENST00000439886 SS18L2Q9UHA2 77 aa9.85□□□□□ -0.83
SMPD4-209ENST00000439886 WDFY3Q8IZQ1 3526 aa9.85□□□□□ -0.83
SMPD4-209ENST00000439886 EPOPA6NHQ4 379 aa9.84□□□□□ -0.83
SMPD4-209ENST00000439886 EN2P19622 333 aaPredicted RBP9.84□□□□□ -0.83
SMPD4-209ENST00000439886 CD27P26842 260 aa9.84□□□□□ -0.83
SMPD4-209ENST00000439886 C1orf53Q5VUE5 145 aa9.84□□□□□ -0.83
SMPD4-209ENST00000439886 DOLPP1Q86YN1 238 aa9.84□□□□□ -0.83
SMPD4-209ENST00000439886 NHLRC2Q8NBF2 726 aa9.84□□□□□ -0.83
SMPD4-209ENST00000439886 QTRT1Q9BXR0 403 aaKnown RBP9.84□□□□□ -0.83
SMPD4-209ENST00000439886 OR5B21A6NL26 309 aa9.84□□□□□ -0.83
SMPD4-209ENST00000439886 C5orf67F2Z3F1 127 aa9.84□□□□□ -0.83
SMPD4-209ENST00000439886 K7EQM0 130 aa9.84□□□□□ -0.83
SMPD4-209ENST00000439886 HAND1O96004 215 aa9.84□□□□□ -0.83
SMPD4-209ENST00000439886 SRIP30626 198 aa9.84□□□□□ -0.83
SMPD4-209ENST00000439886 SSR4P51571 173 aa9.84□□□□□ -0.83
SMPD4-209ENST00000439886 ZNF324BQ6AW86 544 aaPredicted RBP9.84□□□□□ -0.83
SMPD4-209ENST00000439886 PCSK4Q6UW60 755 aa9.84□□□□□ -0.83
SMPD4-209ENST00000439886 RPS19BP1Q86WX3 136 aaKnown RBP9.84□□□□□ -0.83
SMPD4-209ENST00000439886 OR10D3Q8NH80 312 aa9.84□□□□□ -0.83
SMPD4-209ENST00000439886 AGMATQ9BSE5 352 aa9.84□□□□□ -0.83
SMPD4-209ENST00000439886 PLEKHA3Q9HB20 300 aa9.84□□□□□ -0.83
SMPD4-209ENST00000439886 VENTXO95231 258 aa9.84□□□□□ -0.83
SMPD4-209ENST00000439886 RPL15P61313 204 aaKnown RBP9.84□□□□□ -0.83
SMPD4-209ENST00000439886 HOXA4Q00056 320 aaPredicted RBP9.84□□□□□ -0.83
SMPD4-209ENST00000439886 OR4B1Q8NGF8 309 aa9.84□□□□□ -0.83
SMPD4-209ENST00000439886 GNB4Q9HAV0 340 aa9.84□□□□□ -0.83
SMPD4-209ENST00000439886 ARL2-SNX15V9GYD0 113 aa9.84□□□□□ -0.83
SMPD4-209ENST00000439886 LRP5LA4QPB2 252 aa9.83□□□□□ -0.84
SMPD4-209ENST00000439886 OR2T8A6NH00 312 aa9.83□□□□□ -0.84
SMPD4-209ENST00000439886 PDE6DO43924 150 aa9.83□□□□□ -0.84
SMPD4-209ENST00000439886 LIPFP07098 398 aa9.83□□□□□ -0.84
SMPD4-209ENST00000439886 ZNF83P51522 516 aa9.83□□□□□ -0.84
SMPD4-209ENST00000439886 DSCR4P56555 118 aaPredicted RBP9.83□□□□□ -0.84
SMPD4-209ENST00000439886 RPL31P62899 125 aaKnown RBP9.83□□□□□ -0.84
SMPD4-209ENST00000439886 EDDM3AQ14507 147 aa9.83□□□□□ -0.84
SMPD4-209ENST00000439886 RPEL1Q2QD12 228 aa9.83□□□□□ -0.84
SMPD4-209ENST00000439886 ZNF585BQ52M93 769 aa9.83□□□□□ -0.84
SMPD4-209ENST00000439886 ZC2HC1AQ96GY0 325 aa9.83□□□□□ -0.84
SMPD4-209ENST00000439886 LRFN3Q9BTN0 628 aa9.83□□□□□ -0.84
SMPD4-209ENST00000439886 C12orf49Q9H741 205 aa9.83□□□□□ -0.84
SMPD4-209ENST00000439886 SLC45A2Q9UMX9 530 aa9.83□□□□□ -0.84
SMPD4-209ENST00000439886 CHCHD2Q9Y6H1 151 aaPredicted RBP9.83□□□□□ -0.84
SMPD4-209ENST00000439886 ROS1P08922 2347 aa9.83□□□□□ -0.84
SMPD4-209ENST00000439886 HSBP1O75506 76 aa9.83□□□□□ -0.84
SMPD4-209ENST00000439886 OR10J4P0C629 311 aa9.83□□□□□ -0.84
SMPD4-209ENST00000439886 FOXG1P55316 489 aaPredicted RBP9.83□□□□□ -0.84
SMPD4-209ENST00000439886 RELBQ01201 579 aa9.83□□□□□ -0.84
SMPD4-209ENST00000439886 MMD2Q8IY49 270 aa9.83□□□□□ -0.84
SMPD4-209ENST00000439886 VKORC1L1Q8N0U8 176 aa9.83□□□□□ -0.84
SMPD4-209ENST00000439886 OR2Z1Q8NG97 314 aa9.83□□□□□ -0.84
SMPD4-209ENST00000439886 TRAV24A0A0B4J272 114 aa9.83□□□□□ -0.84
SMPD4-209ENST00000439886 LIFP15018 202 aa9.83□□□□□ -0.84
SMPD4-209ENST00000439886 RPL24P83731 157 aaKnown RBP9.83□□□□□ -0.84
SMPD4-209ENST00000439886 CATR1Q13166 79 aa9.83□□□□□ -0.84
SMPD4-209ENST00000439886 HES3Q5TGS1 186 aa9.83□□□□□ -0.84
SMPD4-209ENST00000439886 RNASEKQ6P5S7 137 aaKnown RBP9.83□□□□□ -0.84
SMPD4-209ENST00000439886 OR4P4Q8NGL7 312 aa9.83□□□□□ -0.84
SMPD4-209ENST00000439886 CRISPLD2Q9H0B8 497 aa9.83□□□□□ -0.84
SMPD4-209ENST00000439886 IGHV1OR15-9A0A0B4J2B8 117 aa9.82□□□□□ -0.84
SMPD4-209ENST00000439886 SLC25A53Q5H9E4 307 aa9.82□□□□□ -0.84
SMPD4-209ENST00000439886 WDR74Q6RFH5 385 aaPredicted RBP9.82□□□□□ -0.84
SMPD4-209ENST00000439886 TEX43Q6ZNM6 134 aa9.82□□□□□ -0.84
SMPD4-209ENST00000439886 RNASE7Q9H1E1 156 aaKnown RBP9.82□□□□□ -0.84
SMPD4-209ENST00000439886 RNF114Q9Y508 228 aa9.82□□□□□ -0.84
SMPD4-209ENST00000439886 CEP250Q9BV73 2442 aa9.82□□□□□ -0.84
SMPD4-209ENST00000439886 A0A0G2JMM0 328 aa9.82□□□□□ -0.84
SMPD4-209ENST00000439886 A0A1W2PPB8 328 aa9.82□□□□□ -0.84
SMPD4-209ENST00000439886 DPRXA6NFQ7 191 aa9.82□□□□□ -0.84
SMPD4-209ENST00000439886 C17orf98A8MV24 154 aa9.82□□□□□ -0.84
SMPD4-209ENST00000439886 KIR3DP1A8MWS1 328 aa9.82□□□□□ -0.84
SMPD4-209ENST00000439886 CDIPTO14735 213 aa9.82□□□□□ -0.84
SMPD4-209ENST00000439886 HYPMO75409 117 aa9.82□□□□□ -0.84
SMPD4-209ENST00000439886 CD1BP29016 333 aa9.82□□□□□ -0.84
SMPD4-209ENST00000439886 ARL3P36405 182 aa9.82□□□□□ -0.84
SMPD4-209ENST00000439886 CAMPP49913 170 aa9.82□□□□□ -0.84
SMPD4-209ENST00000439886 LSM10Q969L4 123 aaKnown RBP9.82□□□□□ -0.84
SMPD4-209ENST00000439886 SSBP3Q9BWW4 388 aaPredicted RBP9.82□□□□□ -0.84
SMPD4-209ENST00000439886 THYN1Q9P016 225 aa9.82□□□□□ -0.84
SMPD4-209ENST00000439886 PIGBOS1A0A0B4J2F0 54 aa9.81□□□□□ -0.84
SMPD4-209ENST00000439886 C9orf172C9J069 976 aa9.81□□□□□ -0.84
SMPD4-209ENST00000439886 CA1P00915 261 aaPredicted RBP9.81□□□□□ -0.84
SMPD4-209ENST00000439886 SRSF7Q16629 238 aaKnown RBP eCLIP9.81□□□□□ -0.84
SMPD4-209ENST00000439886 CEACAM21Q3KPI0 293 aa9.81□□□□□ -0.84
SMPD4-209ENST00000439886 STUMQ69YW2 141 aa9.81□□□□□ -0.84
SMPD4-209ENST00000439886 GUSBP11Q6P575 273 aa9.81□□□□□ -0.84
SMPD4-209ENST00000439886 ASCL4Q6XD76 172 aa9.81□□□□□ -0.84
SMPD4-209ENST00000439886 TCTEX1D1Q8N7M0 179 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms