RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 ATOH7Q8N100 152 aa11.3□□□□□ -0.6
PCNX3-202ENST00000439247 POM121L2Q96KW2 1035 aa11.3□□□□□ -0.6
PCNX3-202ENST00000439247 LINC00473A8K010 186 aa11.3□□□□□ -0.6
PCNX3-202ENST00000439247 SNURFLB1AK76 121 aa11.3□□□□□ -0.6
PCNX3-202ENST00000439247 FTH1P19P0C7X4 201 aa11.3□□□□□ -0.6
PCNX3-202ENST00000439247 CHRNB4P30926 498 aa11.3□□□□□ -0.6
PCNX3-202ENST00000439247 ATP6V1FQ16864 119 aa11.3□□□□□ -0.6
PCNX3-202ENST00000439247 LTC4SQ16873 150 aa11.3□□□□□ -0.6
PCNX3-202ENST00000439247 RFESDQ8TAC1 157 aa11.3□□□□□ -0.6
PCNX3-202ENST00000439247 SSMEM1Q8WWF3 244 aa11.3□□□□□ -0.6
PCNX3-202ENST00000439247 RCHY1Q96PM5 261 aa11.3□□□□□ -0.6
PCNX3-202ENST00000439247 NPIPB11E5RHQ5 1161 aa11.29□□□□□ -0.6
PCNX3-202ENST00000439247 GNG10P50151 68 aa11.29□□□□□ -0.6
PCNX3-202ENST00000439247 SPINK14Q6IE38 97 aa11.29□□□□□ -0.6
PCNX3-202ENST00000439247 VKORC1L1Q8N0U8 176 aa11.29□□□□□ -0.6
PCNX3-202ENST00000439247 Q8N976 141 aa11.29□□□□□ -0.6
PCNX3-202ENST00000439247 OR2M7Q8NG81 312 aa11.29□□□□□ -0.6
PCNX3-202ENST00000439247 KCNE4Q8WWG9 221 aa11.29□□□□□ -0.6
PCNX3-202ENST00000439247 CIB3Q96Q77 187 aaPredicted RBP11.29□□□□□ -0.6
PCNX3-202ENST00000439247 WNT10AQ9GZT5 417 aa11.29□□□□□ -0.6
PCNX3-202ENST00000439247 FAM234AQ9H0X4 552 aa11.29□□□□□ -0.6
PCNX3-202ENST00000439247 GNB4Q9HAV0 340 aa11.29□□□□□ -0.6
PCNX3-202ENST00000439247 KCNIP2Q9NS61 270 aa11.29□□□□□ -0.6
PCNX3-202ENST00000439247 DNPH1O43598 174 aa11.29□□□□□ -0.6
PCNX3-202ENST00000439247 FOXH1O75593 365 aa11.29□□□□□ -0.6
PCNX3-202ENST00000439247 NDUFB8O95169 186 aa11.29□□□□□ -0.6
PCNX3-202ENST00000439247 IGHV3-13P01766 116 aa11.29□□□□□ -0.6
PCNX3-202ENST00000439247 IGHV3-7P01780 117 aa11.29□□□□□ -0.6
PCNX3-202ENST00000439247 CD99P14209 185 aa11.29□□□□□ -0.6
PCNX3-202ENST00000439247 CD1BP29016 333 aa11.29□□□□□ -0.6
PCNX3-202ENST00000439247 SELENOTP62341 195 aa11.29□□□□□ -0.6
PCNX3-202ENST00000439247 AESQ08117 197 aa11.29□□□□□ -0.6
PCNX3-202ENST00000439247 H2BFWTQ7Z2G1 175 aa11.29□□□□□ -0.6
PCNX3-202ENST00000439247 SCCPDHQ8NBX0 429 aa11.29□□□□□ -0.6
PCNX3-202ENST00000439247 HCFC1P51610 2035 aa11.29□□□□□ -0.6
PCNX3-202ENST00000439247 WNT9BO14905 357 aa11.29□□□□□ -0.6
PCNX3-202ENST00000439247 LINC00614P0C842 121 aa11.29□□□□□ -0.6
PCNX3-202ENST00000439247 PMCHP20382 165 aa11.29□□□□□ -0.6
PCNX3-202ENST00000439247 OTX2P32243 289 aa11.29□□□□□ -0.6
PCNX3-202ENST00000439247 OR8I2Q8N0Y5 310 aa11.29□□□□□ -0.6
PCNX3-202ENST00000439247 ZNF645Q8N7E2 425 aa11.29□□□□□ -0.6
PCNX3-202ENST00000439247 ST6GALNAC3Q8NDV1 305 aa11.29□□□□□ -0.6
PCNX3-202ENST00000439247 C12orf77C9JDV5 145 aa11.28□□□□□ -0.6
PCNX3-202ENST00000439247 NEURL1O76050 574 aa11.28□□□□□ -0.6
PCNX3-202ENST00000439247 GRPP07492 148 aa11.28□□□□□ -0.6
PCNX3-202ENST00000439247 TCL1AP56279 114 aa11.28□□□□□ -0.6
PCNX3-202ENST00000439247 RPL31P62899 125 aaKnown RBP11.28□□□□□ -0.6
PCNX3-202ENST00000439247 HES7Q9BYE0 225 aa11.28□□□□□ -0.6
PCNX3-202ENST00000439247 DIRC3C9JPN6 131 aa11.28□□□□□ -0.6
PCNX3-202ENST00000439247 C17orf112F2Z3M2 114 aa11.28□□□□□ -0.6
PCNX3-202ENST00000439247 SS18L1O75177 396 aaPredicted RBP11.28□□□□□ -0.6
PCNX3-202ENST00000439247 NXPH2O95156 264 aa11.28□□□□□ -0.6
PCNX3-202ENST00000439247 OR9G9P0C7N8 305 aa11.28□□□□□ -0.6
PCNX3-202ENST00000439247 PAFAH1B2P68402 229 aa11.28□□□□□ -0.6
PCNX3-202ENST00000439247 SPATA45Q537H7 98 aa11.28□□□□□ -0.6
PCNX3-202ENST00000439247 PRR31Q5SQ13 230 aa11.28□□□□□ -0.6
PCNX3-202ENST00000439247 FAM19A2Q8N3H0 131 aa11.28□□□□□ -0.6
PCNX3-202ENST00000439247 RNASE8Q8TDE3 154 aaKnown RBP11.28□□□□□ -0.6
PCNX3-202ENST00000439247 TBL2Q9Y4P3 447 aaKnown RBP11.28□□□□□ -0.6
PCNX3-202ENST00000439247 FXYD3Q14802 87 aa11.27□□□□□ -0.6
PCNX3-202ENST00000439247 VWC2Q2TAL6 325 aa11.27□□□□□ -0.6
PCNX3-202ENST00000439247 ZNF826PQ6ZT77 177 aa11.27□□□□□ -0.6
PCNX3-202ENST00000439247 LINC00596Q86U02 117 aa11.27□□□□□ -0.6
PCNX3-202ENST00000439247 MRGPRDQ8TDS7 321 aa11.27□□□□□ -0.6
PCNX3-202ENST00000439247 C12orf49Q9H741 205 aa11.27□□□□□ -0.6
PCNX3-202ENST00000439247 TET2Q6N021 2002 aaPredicted RBP11.27□□□□□ -0.6
PCNX3-202ENST00000439247 TNFSF15O95150 251 aa11.27□□□□□ -0.61
PCNX3-202ENST00000439247 SSTR5P35346 364 aa11.27□□□□□ -0.61
PCNX3-202ENST00000439247 Q6ZR03 302 aa11.27□□□□□ -0.61
PCNX3-202ENST00000439247 SIGLECL1Q8N7X8 197 aa11.27□□□□□ -0.61
PCNX3-202ENST00000439247 DCTN5Q9BTE1 182 aa11.27□□□□□ -0.61
PCNX3-202ENST00000439247 SPRY4Q9C004 299 aa11.27□□□□□ -0.61
PCNX3-202ENST00000439247 WDR54Q9H977 334 aa11.27□□□□□ -0.61
PCNX3-202ENST00000439247 SEPSECSQ9HD40 501 aaKnown RBP11.27□□□□□ -0.61
PCNX3-202ENST00000439247 TUBG2Q9NRH3 451 aa11.27□□□□□ -0.61
PCNX3-202ENST00000439247 WDR83OSQ9Y284 106 aa11.27□□□□□ -0.61
PCNX3-202ENST00000439247 PIGBOS1A0A0B4J2F0 54 aa11.26□□□□□ -0.61
PCNX3-202ENST00000439247 GFRA1P56159 465 aa11.26□□□□□ -0.61
PCNX3-202ENST00000439247 ANKRD39Q53RE8 183 aa11.26□□□□□ -0.61
PCNX3-202ENST00000439247 COL5A1-AS1Q5SY13 56 aa11.26□□□□□ -0.61
PCNX3-202ENST00000439247 TREML4Q6UXN2 200 aa11.26□□□□□ -0.61
PCNX3-202ENST00000439247 ABHD12Q8N2K0 398 aa11.26□□□□□ -0.61
PCNX3-202ENST00000439247 CT55Q8WUE5 264 aa11.26□□□□□ -0.61
PCNX3-202ENST00000439247 UHRF2Q96PU4 802 aa11.26□□□□□ -0.61
PCNX3-202ENST00000439247 MGST2Q99735 147 aa11.26□□□□□ -0.61
PCNX3-202ENST00000439247 MS4A5Q9H3V2 200 aa11.26□□□□□ -0.61
PCNX3-202ENST00000439247 MBNL3Q9NUK0 354 aaKnown RBP11.26□□□□□ -0.61
PCNX3-202ENST00000439247 IL36BQ9NZH7 164 aa11.26□□□□□ -0.61
PCNX3-202ENST00000439247 SPENQ96T58 3664 aaKnown RBP11.26□□□□□ -0.61
PCNX3-202ENST00000439247 J3QT63 122 aa11.26□□□□□ -0.61
PCNX3-202ENST00000439247 CELA3BP08861 270 aa11.26□□□□□ -0.61
PCNX3-202ENST00000439247 RAC2P15153 192 aa11.26□□□□□ -0.61
PCNX3-202ENST00000439247 C6orf15Q6UXA7 325 aaPredicted RBP11.26□□□□□ -0.61
PCNX3-202ENST00000439247 SLC35E1Q96K37 410 aa11.26□□□□□ -0.61
PCNX3-202ENST00000439247 ZFP30Q9Y2G7 519 aa11.26□□□□□ -0.61
PCNX3-202ENST00000439247 WIPI2Q9Y4P8 454 aa11.26□□□□□ -0.61
PCNX3-202ENST00000439247 PCSK5Q92824 1860 aa11.26□□□□□ -0.61
PCNX3-202ENST00000439247 RNF212BA8MTL3 300 aa11.26□□□□□ -0.61
PCNX3-202ENST00000439247 CCL25O15444 150 aa11.26□□□□□ -0.61
PCNX3-202ENST00000439247 HBZP02008 142 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms