RNA–Protein interactions for RNA: ENST00000439160.6

TCOF1-205, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-205ENST00000439160 RAB24Q969Q5 203 aa10.35□□□□□ -0.75
TCOF1-205ENST00000439160 TMEM186Q96B77 213 aa10.35□□□□□ -0.75
TCOF1-205ENST00000439160 ZNF586Q9NXT0 402 aa10.35□□□□□ -0.75
TCOF1-205ENST00000439160 NUP210Q8TEM1 1887 aaPredicted RBP10.34□□□□□ -0.75
TCOF1-205ENST00000439160 TRAV14DV4A0A0A6YYC5 116 aa10.34□□□□□ -0.75
TCOF1-205ENST00000439160 KBTBD11-OT1A0A1B0GTJ5 212 aa10.34□□□□□ -0.75
TCOF1-205ENST00000439160 A1L4Q6 167 aa10.34□□□□□ -0.75
TCOF1-205ENST00000439160 LDLRAD4O15165 306 aa10.34□□□□□ -0.75
TCOF1-205ENST00000439160 MPDU1O75352 247 aa10.34□□□□□ -0.75
TCOF1-205ENST00000439160 HGFACQ04756 655 aa10.34□□□□□ -0.75
TCOF1-205ENST00000439160 TBR1Q16650 682 aa10.34□□□□□ -0.75
TCOF1-205ENST00000439160 LY6G6FQ5SQ64 297 aa10.34□□□□□ -0.75
TCOF1-205ENST00000439160 ZNF788Q6ZQV5 615 aa10.34□□□□□ -0.75
TCOF1-205ENST00000439160 LINC00518Q8N0U6 118 aa10.34□□□□□ -0.75
TCOF1-205ENST00000439160 FAM122AQ96E09 287 aa10.34□□□□□ -0.75
TCOF1-205ENST00000439160 IGHV3OR16-10A0A075B7F0 116 aa10.34□□□□□ -0.75
TCOF1-205ENST00000439160 RNF222A6NCQ9 220 aa10.34□□□□□ -0.75
TCOF1-205ENST00000439160 USF1P22415 310 aaPredicted RBP10.34□□□□□ -0.75
TCOF1-205ENST00000439160 PLA2G2CQ5R387 149 aa10.34□□□□□ -0.75
TCOF1-205ENST00000439160 WDR61Q9GZS3 305 aaKnown RBP10.34□□□□□ -0.75
TCOF1-205ENST00000439160 SMIM8Q96KF7 97 aa10.34□□□□□ -0.75
TCOF1-205ENST00000439160 CHODLQ9H9P2 273 aa10.34□□□□□ -0.75
TCOF1-205ENST00000439160 KIF26AQ9ULI4 1882 aaPredicted RBP10.34□□□□□ -0.75
TCOF1-205ENST00000439160 PLCE1Q9P212 2302 aa10.34□□□□□ -0.75
TCOF1-205ENST00000439160 HYPMO75409 117 aa10.34□□□□□ -0.75
TCOF1-205ENST00000439160 SRSF10O75494 262 aaKnown RBP10.34□□□□□ -0.75
TCOF1-205ENST00000439160 OTX1P32242 354 aaPredicted RBP10.34□□□□□ -0.75
TCOF1-205ENST00000439160 HIST1H3AP68431 136 aa10.34□□□□□ -0.75
TCOF1-205ENST00000439160 GRAMD2BQ96HH9 432 aa10.34□□□□□ -0.75
TCOF1-205ENST00000439160 TXN2Q99757 166 aa10.34□□□□□ -0.75
TCOF1-205ENST00000439160 FAM106CPP0CH98 169 aa10.33□□□□□ -0.76
TCOF1-205ENST00000439160 PMCHP20382 165 aa10.33□□□□□ -0.76
TCOF1-205ENST00000439160 MDKP21741 143 aaPredicted RBP10.33□□□□□ -0.76
TCOF1-205ENST00000439160 TIMP3P35625 211 aa10.33□□□□□ -0.76
TCOF1-205ENST00000439160 MEF2BQ02080 365 aaPredicted RBP10.33□□□□□ -0.76
TCOF1-205ENST00000439160 C5orf24Q7Z6I8 188 aa10.33□□□□□ -0.76
TCOF1-205ENST00000439160 E9PLN8 166 aa10.33□□□□□ -0.76
TCOF1-205ENST00000439160 PDE6DO43924 150 aa10.33□□□□□ -0.76
TCOF1-205ENST00000439160 SELLP14151 372 aa10.33□□□□□ -0.76
TCOF1-205ENST00000439160 KRTDAPP60985 99 aa10.33□□□□□ -0.76
TCOF1-205ENST00000439160 PAXXQ9BUH6 204 aa10.33□□□□□ -0.76
TCOF1-205ENST00000439160 ZNF581Q9P0T4 197 aa10.33□□□□□ -0.76
TCOF1-205ENST00000439160 NAGKQ9UJ70 344 aa10.33□□□□□ -0.76
TCOF1-205ENST00000439160 NDUFB4O95168 129 aa10.33□□□□□ -0.76
TCOF1-205ENST00000439160 RND3P61587 244 aa10.33□□□□□ -0.76
TCOF1-205ENST00000439160 DPPA3Q6W0C5 159 aa10.33□□□□□ -0.76
TCOF1-205ENST00000439160 DPF1Q92782 380 aa10.33□□□□□ -0.76
TCOF1-205ENST00000439160 RNASE6Q93091 150 aaKnown RBP10.33□□□□□ -0.76
TCOF1-205ENST00000439160 RARRES2Q99969 163 aa10.33□□□□□ -0.76
TCOF1-205ENST00000439160 C2orf16Q68DN1 1984 aa10.33□□□□□ -0.76
TCOF1-205ENST00000439160 CDKN1AP38936 164 aa10.32□□□□□ -0.76
TCOF1-205ENST00000439160 STXBP6Q8NFX7 210 aa10.32□□□□□ -0.76
TCOF1-205ENST00000439160 VKORC1Q9BQB6 163 aa10.32□□□□□ -0.76
TCOF1-205ENST00000439160 A8MXK9 166 aa10.32□□□□□ -0.76
TCOF1-205ENST00000439160 J3KRW8 73 aa10.32□□□□□ -0.76
TCOF1-205ENST00000439160 ETV2O00321 342 aaPredicted RBP10.32□□□□□ -0.76
TCOF1-205ENST00000439160 PEAR1Q5VY43 1037 aaPredicted RBP10.32□□□□□ -0.76
TCOF1-205ENST00000439160 Q6ZS92 163 aa10.32□□□□□ -0.76
TCOF1-205ENST00000439160 RPRMQ9NS64 109 aa10.32□□□□□ -0.76
TCOF1-205ENST00000439160 DNASE2O00115 360 aaPredicted RBP10.32□□□□□ -0.76
TCOF1-205ENST00000439160 DANCRP0C864 163 aa10.32□□□□□ -0.76
TCOF1-205ENST00000439160 RPEL1Q2QD12 228 aa10.32□□□□□ -0.76
TCOF1-205ENST00000439160 ZNF497Q6ZNH5 498 aa10.32□□□□□ -0.76
TCOF1-205ENST00000439160 EAF1Q96JC9 268 aaPredicted RBP10.32□□□□□ -0.76
TCOF1-205ENST00000439160 NCOR2Q9Y618 2525 aa10.32□□□□□ -0.76
TCOF1-205ENST00000439160 SLC31A2O15432 143 aa10.32□□□□□ -0.76
TCOF1-205ENST00000439160 COL8A1P27658 744 aa10.32□□□□□ -0.76
TCOF1-205ENST00000439160 C16orf82Q7Z2V1 217 aa10.32□□□□□ -0.76
TCOF1-205ENST00000439160 OR5AU1Q8NGC0 362 aa10.32□□□□□ -0.76
TCOF1-205ENST00000439160 P2RX4Q99571 388 aa10.32□□□□□ -0.76
TCOF1-205ENST00000439160 SRD5A3Q9H8P0 318 aa10.32□□□□□ -0.76
TCOF1-205ENST00000439160 LRRK1Q38SD2 2015 aa10.32□□□□□ -0.76
TCOF1-205ENST00000439160 PSPNO60542 156 aa10.31□□□□□ -0.76
TCOF1-205ENST00000439160 PAX6P26367 422 aa10.31□□□□□ -0.76
TCOF1-205ENST00000439160 MRPL54Q6P161 138 aaKnown RBP10.31□□□□□ -0.76
TCOF1-205ENST00000439160 IGHV3-35A0A0C4DH35 117 aa10.31□□□□□ -0.76
TCOF1-205ENST00000439160 H0YIZ8 118 aa10.31□□□□□ -0.76
TCOF1-205ENST00000439160 LCN2P80188 198 aa10.31□□□□□ -0.76
TCOF1-205ENST00000439160 UNQ5815/PRO19632Q6UWF5 114 aa10.31□□□□□ -0.76
TCOF1-205ENST00000439160 NPIPB3Q92617 1050 aa10.31□□□□□ -0.76
TCOF1-205ENST00000439160 SPSB4Q96A44 273 aa10.31□□□□□ -0.76
TCOF1-205ENST00000439160 HIGD1AQ9Y241 93 aa10.31□□□□□ -0.76
TCOF1-205ENST00000439160 IGHV1-46P01743 117 aa10.31□□□□□ -0.76
TCOF1-205ENST00000439160 IGHG3P01860 377 aa10.31□□□□□ -0.76
TCOF1-205ENST00000439160 SMIM6P0DI80 62 aa10.31□□□□□ -0.76
TCOF1-205ENST00000439160 G0S2P27469 103 aa10.31□□□□□ -0.76
TCOF1-205ENST00000439160 SELENOTP62341 195 aa10.31□□□□□ -0.76
TCOF1-205ENST00000439160 TMEM30BQ3MIR4 351 aa10.31□□□□□ -0.76
TCOF1-205ENST00000439160 RNF126Q9BV68 326 aa10.31□□□□□ -0.76
TCOF1-205ENST00000439160 B4DEV8 164 aa10.3□□□□□ -0.76
TCOF1-205ENST00000439160 GLRX5Q86SX6 157 aa10.3□□□□□ -0.76
TCOF1-205ENST00000439160 E9PQ18 207 aa10.3□□□□□ -0.76
TCOF1-205ENST00000439160 TM4SF5O14894 197 aa10.3□□□□□ -0.76
TCOF1-205ENST00000439160 CA2P00918 260 aa10.3□□□□□ -0.76
TCOF1-205ENST00000439160 BMI1P35226 326 aa10.3□□□□□ -0.76
TCOF1-205ENST00000439160 OR4A47Q6IF82 309 aa10.3□□□□□ -0.76
TCOF1-205ENST00000439160 SLC25A15Q9Y619 301 aa10.3□□□□□ -0.76
TCOF1-205ENST00000439160 KIAA1671Q9BY89 1806 aa10.3□□□□□ -0.76
TCOF1-205ENST00000439160 LY6EQ16553 131 aa10.3□□□□□ -0.76
TCOF1-205ENST00000439160 FAM90A1Q86YD7 464 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms