RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 TMEM160Q9NX00 188 aa18.42■□□□□ 0.54
CPSF4-204ENST00000436336 ACANP16112 2415 aa18.42■□□□□ 0.54
CPSF4-204ENST00000436336 UPK2O00526 184 aa18.41■□□□□ 0.54
CPSF4-204ENST00000436336 SNAPC5O75971 98 aa18.41■□□□□ 0.54
CPSF4-204ENST00000436336 FGL1Q08830 312 aa18.41■□□□□ 0.54
CPSF4-204ENST00000436336 MMDQ15546 238 aa18.41■□□□□ 0.54
CPSF4-204ENST00000436336 NPBQ8NG41 125 aa18.41■□□□□ 0.54
CPSF4-204ENST00000436336 TMEM167AQ8TBQ9 72 aa18.41■□□□□ 0.54
CPSF4-204ENST00000436336 NSG2Q9Y328 171 aa18.41■□□□□ 0.54
CPSF4-204ENST00000436336 TRAV3A0A0B4J244 114 aa18.4■□□□□ 0.54
CPSF4-204ENST00000436336 NBR2O15453 112 aa18.4■□□□□ 0.54
CPSF4-204ENST00000436336 RBMXL2O75526 392 aaKnown RBP18.4■□□□□ 0.54
CPSF4-204ENST00000436336 SCGB1D2O95969 90 aa18.4■□□□□ 0.54
CPSF4-204ENST00000436336 CRYGBP07316 175 aa18.4■□□□□ 0.54
CPSF4-204ENST00000436336 PSMB6P28072 239 aa18.4■□□□□ 0.54
CPSF4-204ENST00000436336 NKX2-1P43699 371 aaPredicted RBP18.4■□□□□ 0.54
CPSF4-204ENST00000436336 DEFB112Q30KQ8 113 aa18.4■□□□□ 0.54
CPSF4-204ENST00000436336 FBLN7Q53RD9 439 aa18.4■□□□□ 0.54
CPSF4-204ENST00000436336 FOXRED2Q8IWF2 684 aa18.4■□□□□ 0.54
CPSF4-204ENST00000436336 C22orf15Q8WYQ4 148 aa18.4■□□□□ 0.54
CPSF4-204ENST00000436336 ZFP57Q9NU63 452 aa18.4■□□□□ 0.54
CPSF4-204ENST00000436336 C15orf61A6NNL5 157 aa18.4■□□□□ 0.54
CPSF4-204ENST00000436336 NDUFA3O95167 84 aa18.4■□□□□ 0.54
CPSF4-204ENST00000436336 HNF1AP20823 631 aa18.4■□□□□ 0.54
CPSF4-204ENST00000436336 F2RL1P55085 397 aa18.4■□□□□ 0.54
CPSF4-204ENST00000436336 ID3Q02535 119 aa18.4■□□□□ 0.54
CPSF4-204ENST00000436336 RAB32Q13637 225 aa18.4■□□□□ 0.54
CPSF4-204ENST00000436336 LRRC37A5PQ49AS3 106 aa18.4■□□□□ 0.54
CPSF4-204ENST00000436336 AARDQ4LEZ3 155 aa18.4■□□□□ 0.54
CPSF4-204ENST00000436336 ZNF429Q86V71 674 aa18.4■□□□□ 0.54
CPSF4-204ENST00000436336 PIFOQ8TCI5 191 aa18.4■□□□□ 0.54
CPSF4-204ENST00000436336 SMR3AQ99954 134 aa18.4■□□□□ 0.54
CPSF4-204ENST00000436336 KIAA1456Q9P272 454 aa18.4■□□□□ 0.54
CPSF4-204ENST00000436336 METTL1Q9UBP6 276 aaKnown RBP18.4■□□□□ 0.54
CPSF4-204ENST00000436336 FAM90A26D6RGX4 464 aa18.39■□□□□ 0.53
CPSF4-204ENST00000436336 G3V3Q6 166 aa18.39■□□□□ 0.53
CPSF4-204ENST00000436336 SMLR1H3BR10 107 aa18.39■□□□□ 0.53
CPSF4-204ENST00000436336 RRHO14718 337 aa18.39■□□□□ 0.53
CPSF4-204ENST00000436336 MPC2O95563 127 aa18.39■□□□□ 0.53
CPSF4-204ENST00000436336 LY6G6DO95868 133 aa18.39■□□□□ 0.53
CPSF4-204ENST00000436336 MBPP02686 304 aaPredicted RBP18.39■□□□□ 0.53
CPSF4-204ENST00000436336 OR2B8PP59922 312 aa18.39■□□□□ 0.53
CPSF4-204ENST00000436336 CXorf66Q5JRM2 361 aaPredicted RBP18.39■□□□□ 0.53
CPSF4-204ENST00000436336 IL17RELQ6ZVW7 336 aa18.39■□□□□ 0.53
CPSF4-204ENST00000436336 OR8H1Q8NGG4 311 aa18.39■□□□□ 0.53
CPSF4-204ENST00000436336 PPP1R14BQ96C90 147 aa18.39■□□□□ 0.53
CPSF4-204ENST00000436336 CACFD1Q9UGQ2 172 aa18.39■□□□□ 0.53
CPSF4-204ENST00000436336 PRNDQ9UKY0 176 aa18.39■□□□□ 0.53
CPSF4-204ENST00000436336 MDFIC2A0A1B0GVS7 189 aa18.38■□□□□ 0.53
CPSF4-204ENST00000436336 ST8SIA3O43173 380 aa18.38■□□□□ 0.53
CPSF4-204ENST00000436336 FGF2P09038 288 aa18.38■□□□□ 0.53
CPSF4-204ENST00000436336 SRP14P37108 136 aaKnown RBP18.38■□□□□ 0.53
CPSF4-204ENST00000436336 Q5BKY6 102 aa18.38■□□□□ 0.53
CPSF4-204ENST00000436336 QTRT1Q9BXR0 403 aaKnown RBP18.38■□□□□ 0.53
CPSF4-204ENST00000436336 C1RLQ9NZP8 487 aa18.38■□□□□ 0.53
CPSF4-204ENST00000436336 FOXA2Q9Y261 457 aaPredicted RBP18.38■□□□□ 0.53
CPSF4-204ENST00000436336 SIGLEC9Q9Y336 463 aa18.38■□□□□ 0.53
CPSF4-204ENST00000436336 POMT1Q9Y6A1 747 aa18.38■□□□□ 0.53
CPSF4-204ENST00000436336 C1QBP02746 253 aa18.37■□□□□ 0.53
CPSF4-204ENST00000436336 PET100P0DJ07 73 aa18.37■□□□□ 0.53
CPSF4-204ENST00000436336 S100A10P60903 97 aa18.37■□□□□ 0.53
CPSF4-204ENST00000436336 PLSCR3Q9NRY6 295 aa18.37■□□□□ 0.53
CPSF4-204ENST00000436336 TMEM14BQ9NUH8 114 aa18.37■□□□□ 0.53
CPSF4-204ENST00000436336 FKBP11Q9NYL4 201 aa18.37■□□□□ 0.53
CPSF4-204ENST00000436336 HSPB7Q9UBY9 170 aa18.37■□□□□ 0.53
CPSF4-204ENST00000436336 TLN2Q9Y4G6 2542 aa18.37■□□□□ 0.53
CPSF4-204ENST00000436336 TNCP24821 2201 aa18.37■□□□□ 0.53
CPSF4-204ENST00000436336 TRAV14DV4A0A0A6YYC5 116 aa18.37■□□□□ 0.53
CPSF4-204ENST00000436336 H3BUX3 64 aa18.37■□□□□ 0.53
CPSF4-204ENST00000436336 K7EPK0 472 aa18.37■□□□□ 0.53
CPSF4-204ENST00000436336 NXPH3O95157 252 aa18.37■□□□□ 0.53
CPSF4-204ENST00000436336 RPL8P62917 257 aaKnown RBP18.37■□□□□ 0.53
CPSF4-204ENST00000436336 PPP1R27Q86WC6 154 aa18.37■□□□□ 0.53
CPSF4-204ENST00000436336 FAM71E2Q8N5Q1 922 aa18.37■□□□□ 0.53
CPSF4-204ENST00000436336 OR52E5Q8NH55 327 aa18.37■□□□□ 0.53
CPSF4-204ENST00000436336 FBXL15Q9H469 300 aa18.37■□□□□ 0.53
CPSF4-204ENST00000436336 PRDM13Q9H4Q3 707 aa18.37■□□□□ 0.53
CPSF4-204ENST00000436336 TPSG1Q9NRR2 321 aa18.37■□□□□ 0.53
CPSF4-204ENST00000436336 TCF19Q9Y242 345 aa18.37■□□□□ 0.53
CPSF4-204ENST00000436336 LSM5Q9Y4Y9 91 aaKnown RBP18.37■□□□□ 0.53
CPSF4-204ENST00000436336 TNFRSF9Q07011 255 aa18.36■□□□□ 0.53
CPSF4-204ENST00000436336 PLGLAQ15195 96 aa18.36■□□□□ 0.53
CPSF4-204ENST00000436336 ZFP69Q49AA0 526 aa18.36■□□□□ 0.53
CPSF4-204ENST00000436336 MMD2Q8IY49 270 aa18.36■□□□□ 0.53
CPSF4-204ENST00000436336 THAP6Q8TBB0 222 aa18.36■□□□□ 0.53
CPSF4-204ENST00000436336 ZNF430Q9H8G1 570 aaPredicted RBP18.36■□□□□ 0.53
CPSF4-204ENST00000436336 ZNF257Q9Y2Q1 563 aa18.36■□□□□ 0.53
CPSF4-204ENST00000436336 NCBP2LA6PVI3 153 aaKnown RBP18.35■□□□□ 0.53
CPSF4-204ENST00000436336 RLN2P04090 185 aa18.35■□□□□ 0.53
CPSF4-204ENST00000436336 MRGPRG-AS1Q2M3A8 158 aa18.35■□□□□ 0.53
CPSF4-204ENST00000436336 C11orf87Q6NUJ2 197 aa18.35■□□□□ 0.53
CPSF4-204ENST00000436336 ZDHHC16Q969W1 377 aa18.35■□□□□ 0.53
CPSF4-204ENST00000436336 PITPNC1Q9UKF7 332 aa18.35■□□□□ 0.53
CPSF4-204ENST00000436336 OR51B2Q9Y5P1 312 aa18.35■□□□□ 0.53
CPSF4-204ENST00000436336 WRBO00258 174 aa18.35■□□□□ 0.53
CPSF4-204ENST00000436336 POLR2GP62487 172 aaKnown RBP eCLIP18.35■□□□□ 0.53
CPSF4-204ENST00000436336 PRSS8Q16651 343 aa18.35■□□□□ 0.53
CPSF4-204ENST00000436336 C5orf64Q2M2E5 130 aa18.35■□□□□ 0.53
CPSF4-204ENST00000436336 PDLIM3Q53GG5 364 aaPredicted RBP18.35■□□□□ 0.53
CPSF4-204ENST00000436336 PRSS54Q6PEW0 395 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms