RNA–Protein interactions for RNA: ENST00000435145.6

HLA-DQB2-231, Transcript of major histocompatibility complex, class II, DQ beta 2, human

BASIC

Gene HLA-DQB2, Length 2,026 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HLA-DQB2-231	ENST00000435145	ZNF439	Q8NDP4	499 aa		13.25	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	OR4X1	Q8NH49	305 aa		13.25	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	ANAPC16	Q96DE5	110 aa		13.25	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	C1orf159	Q96HA4	380 aa		13.25	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	MGST2	Q99735	147 aa		13.25	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	GGTLC1	Q9BX51	225 aa		13.25	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	MS4A5	Q9H3V2	200 aa		13.25	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	LSM4	Q9Y4Z0	139 aa	Known RBP	13.25	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	PDE6D	O43924	150 aa		13.24	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	IGHV3-7	P01780	117 aa		13.24	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	GALR1	P47211	349 aa		13.24	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	GPR61	Q9BZJ8	451 aa		13.24	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	TMEM14B	Q9NUH8	114 aa		13.24	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	FOXA2	Q9Y261	457 aa	Predicted RBP	13.24	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	HCFC1	P51610	2035 aa		13.24	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	SAA2-SAA4	A0A096LPE2	208 aa		13.23	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	TRAV38-1	A0A0B4J264	116 aa		13.23	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	TMPRSS2	O15393	492 aa		13.23	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	HRAS	P01112	189 aa		13.23	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	SAA2	P0DJI9	122 aa	Predicted RBP	13.23	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	CEACAM8	P31997	349 aa	Predicted RBP	13.23	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	THBS3	P49746	956 aa		13.23	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	POU2AF1	Q16633	256 aa		13.23	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	FAM201A	Q5SY85	155 aa		13.23	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	SFXN3	Q9BWM7	321 aa		13.23	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	GCM1	Q9NP62	436 aa		13.23	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	KCNIP2	Q9NS61	270 aa		13.23	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	RNF7	Q9UBF6	113 aa		13.23	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	DMRT1	Q9Y5R6	373 aa		13.23	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	GGCT	O75223	188 aa	Known RBP	13.23	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	DNLZ	Q5SXM8	178 aa		13.23	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	VHLL	Q6RSH7	139 aa		13.23	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	ABHD12	Q8N2K0	398 aa		13.23	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	OR10D4P	Q8NGN7	298 aa		13.23	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	OR5B12	Q96R08	314 aa		13.23	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	IL19	Q9UHD0	177 aa		13.23	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	LOC400499	M0QZD8	3231 aa		13.23	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	IGHV1-46	P01743	117 aa		13.22	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	STAG3L2	P0CL84	134 aa		13.22	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	STAG3L3	P0CL85	134 aa		13.22	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	GNB1	P62873	340 aa		13.22	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	RTP5	Q14D33	572 aa		13.22	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	ALKBH2	Q6NS38	261 aa		13.22	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	ZNF383	Q8NA42	475 aa		13.22	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	LEAP2	Q969E1	77 aa		13.22	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	ADTRP	Q96IZ2	230 aa		13.22	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	RHOV	Q96L33	236 aa		13.22	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	GAFA1	Q96PS6	74 aa		13.22	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	TXNDC17	Q9BRA2	123 aa		13.22	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	ELOVL1	Q9BW60	279 aa		13.22	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	PITPNC1	Q9UKF7	332 aa		13.22	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	PXMP4	Q9Y6I8	212 aa		13.22	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	CUL9	Q8IWT3	2517 aa		13.22	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	TRGV10	A0A0A0MS01	117 aa		13.22	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145		F6UZH7	168 aa		13.22	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	TYMS	P04818	313 aa		13.22	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	IL6R	P08887	468 aa	Predicted RBP	13.22	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	CD99	P14209	185 aa		13.22	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	SRP14	P37108	136 aa	Known RBP	13.22	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	TMEM30B	Q3MIR4	351 aa		13.22	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	C4orf17	Q53FE4	359 aa		13.22	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	COA6	Q5JTJ3	125 aa	Known RBP	13.22	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	OR4A47	Q6IF82	309 aa		13.22	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	DUX4L9	Q6RFH8	374 aa	Predicted RBP	13.22	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	CORO2A	Q92828	525 aa		13.22	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145		A0A1W2PPV4	95 aa		13.21	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	ATP5G3	P48201	142 aa		13.21	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	HSPE1	P61604	102 aa	Known RBP	13.21	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	TNFAIP6	P98066	277 aa	Predicted RBP	13.21	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	ZNF788	Q6ZQV5	615 aa		13.21	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	LINC01551	Q86U37	167 aa		13.21	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	NPVF	Q9HCQ7	196 aa		13.21	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	IDI2-AS1	Q9NZ38	188 aa		13.21	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	DSCAM	O60469	2012 aa		13.21	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	DSCAML1	Q8TD84	2053 aa		13.21	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	TET2	Q6N021	2002 aa	Predicted RBP	13.21	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	ZNF729	A6NN14	1252 aa	Predicted RBP	13.2	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	MRPS11	P82912	194 aa	Known RBP	13.2	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	ARSJ	Q5FYB0	599 aa	Predicted RBP	13.2	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	MIC13	Q5XKP0	118 aa		13.2	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	C22orf34	Q6ZV56	151 aa		13.2	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	RBMXL3	Q8N7X1	1067 aa	Known RBP	13.2	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	NECAP1	Q8NC96	275 aa		13.2	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	PATZ1	Q9HBE1	687 aa	Known RBP	13.2	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	DSP	P15924	2871 aa	Known RBP	13.2	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	PPP5D1	E7EU14	171 aa		13.2	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	FNDC10	F2Z333	226 aa		13.2	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	TM4SF5	O14894	197 aa		13.2	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	CRYAB	P02511	175 aa	Known RBP	13.2	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	ARL14EPL	P0DKL9	152 aa		13.2	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	NPY1R	P25929	384 aa		13.2	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	FAM3B	P58499	235 aa	Predicted RBP	13.2	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	TEX36	Q5VZQ5	186 aa		13.2	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	SLC24A4	Q8NFF2	622 aa		13.2	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	ZCCHC14	Q8WYQ9	949 aa	Known RBP	13.2	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	PCGF1	Q9BSM1	259 aa		13.2	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	CAD	P27708	2225 aa		13.19	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145		A8MXE2	369 aa		13.19	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	CXorf1	O96002	111 aa		13.19	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	CD40	P25942	277 aa		13.19	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms