RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 LGALS9BQ3B8N2 356 aa1.33□□□□□ -2.2
PTPN4-205ENST00000433888 LGALS9CQ6DKI2 356 aa1.33□□□□□ -2.2
PTPN4-205ENST00000433888 ZNF767PQ75MW2 155 aa1.33□□□□□ -2.2
PTPN4-205ENST00000433888 C3orf22Q8N5N4 141 aa1.33□□□□□ -2.2
PTPN4-205ENST00000433888 OR2D3Q8NGH3 330 aa1.33□□□□□ -2.2
PTPN4-205ENST00000433888 ACOT12Q8WYK0 555 aa1.33□□□□□ -2.2
PTPN4-205ENST00000433888 MS4A6EQ96DS6 147 aa1.33□□□□□ -2.2
PTPN4-205ENST00000433888 DCUN1D1Q96GG9 259 aa1.33□□□□□ -2.2
PTPN4-205ENST00000433888 PHB2Q99623 299 aa1.33□□□□□ -2.2
PTPN4-205ENST00000433888 HIGD2AQ9BW72 106 aa1.33□□□□□ -2.2
PTPN4-205ENST00000433888 UQCC1Q9NVA1 299 aa1.33□□□□□ -2.2
PTPN4-205ENST00000433888 GLTPQ9NZD2 209 aa1.33□□□□□ -2.2
PTPN4-205ENST00000433888 TP73-AS1Q9UF72 201 aa1.33□□□□□ -2.2
PTPN4-205ENST00000433888 PRELID1Q9Y255 219 aa1.33□□□□□ -2.2
PTPN4-205ENST00000433888 FAM32AQ9Y421 112 aaKnown RBP1.33□□□□□ -2.2
PTPN4-205ENST00000433888 HEY1Q9Y5J3 304 aa1.33□□□□□ -2.2
PTPN4-205ENST00000433888 PTPRJQ12913 1337 aa1.33□□□□□ -2.2
PTPN4-205ENST00000433888 ZSWIM8A7E2V4 1837 aa1.33□□□□□ -2.2
PTPN4-205ENST00000433888 SIPA1L1O43166 1804 aa1.33□□□□□ -2.2
PTPN4-205ENST00000433888 FLT4P35916 1363 aa1.33□□□□□ -2.2
PTPN4-205ENST00000433888 SCN10AQ9Y5Y9 1956 aa1.32□□□□□ -2.2
PTPN4-205ENST00000433888 MAST2Q6P0Q8 1798 aa1.32□□□□□ -2.2
PTPN4-205ENST00000433888 IGLV10-54A0A075B6I4 117 aa1.32□□□□□ -2.2
PTPN4-205ENST00000433888 A0A087WUU8 490 aa1.32□□□□□ -2.2
PTPN4-205ENST00000433888 IGKV1D-43A0A0B4J1Z2 117 aa1.32□□□□□ -2.2
PTPN4-205ENST00000433888 IGKV2-24A0A0C4DH68 120 aa1.32□□□□□ -2.2
PTPN4-205ENST00000433888 GGT3PA6NGU5 568 aa1.32□□□□□ -2.2
PTPN4-205ENST00000433888 RFPL4AA6NLU0 287 aa1.32□□□□□ -2.2
PTPN4-205ENST00000433888 RFPL4AL1F8VTS6 287 aa1.32□□□□□ -2.2
PTPN4-205ENST00000433888 C3orf84H3BNL1 204 aa1.32□□□□□ -2.2
PTPN4-205ENST00000433888 H3BT86 120 aa1.32□□□□□ -2.2
PTPN4-205ENST00000433888 PSMD12O00232 456 aaPredicted RBP1.32□□□□□ -2.2
PTPN4-205ENST00000433888 CSRP1P21291 193 aaKnown RBP1.32□□□□□ -2.2
PTPN4-205ENST00000433888 ATP6V0CP27449 155 aa1.32□□□□□ -2.2
PTPN4-205ENST00000433888 S100A7P31151 101 aa1.32□□□□□ -2.2
PTPN4-205ENST00000433888 SERPINB9P50453 376 aa1.32□□□□□ -2.2
PTPN4-205ENST00000433888 ZNF140P52738 457 aaPredicted RBP1.32□□□□□ -2.2
PTPN4-205ENST00000433888 TBPL1P62380 186 aa1.32□□□□□ -2.2
PTPN4-205ENST00000433888 CCL7P80098 99 aa1.32□□□□□ -2.2
PTPN4-205ENST00000433888 PLPPR5Q32ZL2 321 aa1.32□□□□□ -2.2
PTPN4-205ENST00000433888 PYCR3Q53H96 274 aa1.32□□□□□ -2.2
PTPN4-205ENST00000433888 LPCAT3Q6P1A2 487 aa1.32□□□□□ -2.2
PTPN4-205ENST00000433888 C5orf46Q6UWT4 87 aa1.32□□□□□ -2.2
PTPN4-205ENST00000433888 TBC1D19Q8N5T2 526 aa1.32□□□□□ -2.2
PTPN4-205ENST00000433888 OR51T1Q8NGJ9 327 aa1.32□□□□□ -2.2
PTPN4-205ENST00000433888 JOSD2Q8TAC2 188 aa1.32□□□□□ -2.2
PTPN4-205ENST00000433888 FNDC9Q8TBE3 224 aa1.32□□□□□ -2.2
PTPN4-205ENST00000433888 TMA16Q96EY4 203 aaKnown RBP1.32□□□□□ -2.2
PTPN4-205ENST00000433888 CPNE2Q96FN4 548 aaPredicted RBP1.32□□□□□ -2.2
PTPN4-205ENST00000433888 C9orf16Q9BUW7 83 aa1.32□□□□□ -2.2
PTPN4-205ENST00000433888 TMEM147Q9BVK8 224 aa1.32□□□□□ -2.2
PTPN4-205ENST00000433888 NKX6-2Q9C056 277 aaPredicted RBP1.32□□□□□ -2.2
PTPN4-205ENST00000433888 DCSTAMPQ9H295 470 aa1.32□□□□□ -2.2
PTPN4-205ENST00000433888 C11orf68Q9H3H3 251 aaKnown RBP1.32□□□□□ -2.2
PTPN4-205ENST00000433888 SMDT1Q9H4I9 107 aa1.32□□□□□ -2.2
PTPN4-205ENST00000433888 ENY2Q9NPA8 101 aa1.32□□□□□ -2.2
PTPN4-205ENST00000433888 TAAR3PQ9P1P4 343 aa1.32□□□□□ -2.2
PTPN4-205ENST00000433888 NAT8Q9UHE5 227 aa1.32□□□□□ -2.2
PTPN4-205ENST00000433888 ARL2BPQ9Y2Y0 163 aa1.32□□□□□ -2.2
PTPN4-205ENST00000433888 RBM7Q9Y580 266 aaKnown RBP1.32□□□□□ -2.2
PTPN4-205ENST00000433888 MTUS2Q5JR59 1369 aa1.32□□□□□ -2.2
PTPN4-205ENST00000433888 TRBV20OR9-2A0A075B6H5 130 aa1.31□□□□□ -2.2
PTPN4-205ENST00000433888 DISC1C4P0D8 188 aa1.31□□□□□ -2.2
PTPN4-205ENST00000433888 E7EQL1 145 aa1.31□□□□□ -2.2
PTPN4-205ENST00000433888 G3V3Q6 166 aa1.31□□□□□ -2.2
PTPN4-205ENST00000433888 CRYZL1O95825 349 aa1.31□□□□□ -2.2
PTPN4-205ENST00000433888 HLA-DRB1P01911 266 aa1.31□□□□□ -2.2
PTPN4-205ENST00000433888 P0C880 135 aa1.31□□□□□ -2.2
PTPN4-205ENST00000433888 SMIM17P0DL12 118 aa1.31□□□□□ -2.2
PTPN4-205ENST00000433888 KCNE1P15382 129 aa1.31□□□□□ -2.2
PTPN4-205ENST00000433888 HLA-DMBP28068 263 aa1.31□□□□□ -2.2
PTPN4-205ENST00000433888 S100A5P33763 92 aa1.31□□□□□ -2.2
PTPN4-205ENST00000433888 GLO1Q04760 184 aa1.31□□□□□ -2.2
PTPN4-205ENST00000433888 KISS1Q15726 138 aa1.31□□□□□ -2.2
PTPN4-205ENST00000433888 GRK1Q15835 563 aa1.31□□□□□ -2.2
PTPN4-205ENST00000433888 SSX8Q7RTT4 187 aa1.31□□□□□ -2.2
PTPN4-205ENST00000433888 GLT6D1Q7Z4J2 308 aa1.31□□□□□ -2.2
PTPN4-205ENST00000433888 LRRC25Q8N386 305 aaPredicted RBP1.31□□□□□ -2.2
PTPN4-205ENST00000433888 ZNF664Q8N3J9 261 aa1.31□□□□□ -2.2
PTPN4-205ENST00000433888 SLC22A24Q8N4F4 322 aa1.31□□□□□ -2.2
PTPN4-205ENST00000433888 RPRMLQ8N4K4 120 aa1.31□□□□□ -2.2
PTPN4-205ENST00000433888 OR10X1Q8NGY0 326 aa1.31□□□□□ -2.2
PTPN4-205ENST00000433888 PHOSPHO2Q8TCD6 241 aa1.31□□□□□ -2.2
PTPN4-205ENST00000433888 IMMP2LQ96T52 175 aa1.31□□□□□ -2.2
PTPN4-205ENST00000433888 PKMYT1Q99640 499 aa1.31□□□□□ -2.2
PTPN4-205ENST00000433888 MIEN1Q9BRT3 115 aa1.31□□□□□ -2.2
PTPN4-205ENST00000433888 MRPL27Q9P0M9 148 aaKnown RBP1.31□□□□□ -2.2
PTPN4-205ENST00000433888 DOK5Q9P104 306 aa1.31□□□□□ -2.2
PTPN4-205ENST00000433888 WDR90Q96KV7 1748 aa1.3□□□□□ -2.2
PTPN4-205ENST00000433888 IGHV1-69-2A0A0G2JMI3 117 aa1.3□□□□□ -2.2
PTPN4-205ENST00000433888 A0A1W2PQD3 144 aa1.3□□□□□ -2.2
PTPN4-205ENST00000433888 DHRS12A0PJE2 317 aa1.3□□□□□ -2.2
PTPN4-205ENST00000433888 CLDN25C9JDP6 229 aa1.3□□□□□ -2.2
PTPN4-205ENST00000433888 FNDC10F2Z333 226 aa1.3□□□□□ -2.2
PTPN4-205ENST00000433888 LEPROTO15243 131 aa1.3□□□□□ -2.2
PTPN4-205ENST00000433888 ZNF189O75820 626 aaPredicted RBP1.3□□□□□ -2.2
PTPN4-205ENST00000433888 OR5F1O95221 314 aa1.3□□□□□ -2.2
PTPN4-205ENST00000433888 CDS2O95674 445 aa1.3□□□□□ -2.2
PTPN4-205ENST00000433888 OR5G3P0C626 314 aa1.3□□□□□ -2.2
PTPN4-205ENST00000433888 GZMBP10144 247 aa1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms