RNA–Protein interactions for RNA: ENST00000433645.1

LINC01239-201, Transcript of long intergenic non-protein coding RNA 1239, humanhuman

TSL 3

Gene LINC01239, Length 325 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01239-201ENST00000433645 PACRGQ96M98 296 aaPredicted RBP0.47□□□□□ -2.33
LINC01239-201ENST00000433645 TMEM109Q9BVC6 243 aa0.47□□□□□ -2.33
LINC01239-201ENST00000433645 NSRP1Q9H0G5 558 aaKnown RBP0.47□□□□□ -2.33
LINC01239-201ENST00000433645 GMEB1Q9Y692 573 aa0.47□□□□□ -2.33
LINC01239-201ENST00000433645 LHFPL6Q9Y693 200 aa0.47□□□□□ -2.33
LINC01239-201ENST00000433645 NCOA6Q14686 2063 aaPredicted RBP0.47□□□□□ -2.33
LINC01239-201ENST00000433645 HEATR5AQ86XA9 2040 aa0.47□□□□□ -2.33
LINC01239-201ENST00000433645 EXPH5Q8NEV8 1989 aa0.46□□□□□ -2.34
LINC01239-201ENST00000433645 IBA57-AS1B1ANH7 110 aa0.46□□□□□ -2.34
LINC01239-201ENST00000433645 CXCL3P19876 107 aa0.46□□□□□ -2.34
LINC01239-201ENST00000433645 GRPRP30550 384 aa0.46□□□□□ -2.34
LINC01239-201ENST00000433645 REG1BP48304 166 aa0.46□□□□□ -2.34
LINC01239-201ENST00000433645 C10orf55Q5SWW7 151 aa0.46□□□□□ -2.34
LINC01239-201ENST00000433645 RASSF6Q6ZTQ3 369 aa0.46□□□□□ -2.34
LINC01239-201ENST00000433645 FAM19A5Q7Z5A7 132 aaPredicted RBP0.46□□□□□ -2.34
LINC01239-201ENST00000433645 C12orf29Q8N999 325 aa0.46□□□□□ -2.34
LINC01239-201ENST00000433645 JOSD2Q8TAC2 188 aa0.46□□□□□ -2.34
LINC01239-201ENST00000433645 RAB2BQ8WUD1 216 aa0.46□□□□□ -2.34
LINC01239-201ENST00000433645 MRPL57Q9BQC6 102 aaKnown RBP0.46□□□□□ -2.34
LINC01239-201ENST00000433645 TIPINQ9BVW5 301 aa0.46□□□□□ -2.34
LINC01239-201ENST00000433645 EURLQ9NYK6 297 aa0.46□□□□□ -2.34
LINC01239-201ENST00000433645 SNURFQ9Y675 71 aa0.46□□□□□ -2.34
LINC01239-201ENST00000433645 TONSLQ96HA7 1378 aa0.45□□□□□ -2.34
LINC01239-201ENST00000433645 TMED7-TICAM2A0A0A6YYA0 188 aa0.45□□□□□ -2.34
LINC01239-201ENST00000433645 GEMIN2O14893 280 aaKnown RBP0.45□□□□□ -2.34
LINC01239-201ENST00000433645 TRGC1P0CF51 173 aa0.45□□□□□ -2.34
LINC01239-201ENST00000433645 HIST1H1CP16403 213 aaKnown RBP0.45□□□□□ -2.34
LINC01239-201ENST00000433645 MSNP26038 577 aaKnown RBP0.45□□□□□ -2.34
LINC01239-201ENST00000433645 MGAT3Q09327 533 aa0.45□□□□□ -2.34
LINC01239-201ENST00000433645 NDUFA5Q16718 116 aa0.45□□□□□ -2.34
LINC01239-201ENST00000433645 DHFR2Q86XF0 187 aa0.45□□□□□ -2.34
LINC01239-201ENST00000433645 FAM19A2Q8N3H0 131 aa0.45□□□□□ -2.34
LINC01239-201ENST00000433645 PACRGLQ8N7B6 248 aa0.45□□□□□ -2.34
LINC01239-201ENST00000433645 OR7G1Q8NGA0 311 aa0.45□□□□□ -2.34
LINC01239-201ENST00000433645 OR8B3Q8NGG8 313 aa0.45□□□□□ -2.34
LINC01239-201ENST00000433645 HAVCR2Q8TDQ0 301 aa0.45□□□□□ -2.34
LINC01239-201ENST00000433645 GNPNAT1Q96EK6 184 aaPredicted RBP0.45□□□□□ -2.34
LINC01239-201ENST00000433645 CD300AQ9UGN4 299 aa0.45□□□□□ -2.34
LINC01239-201ENST00000433645 RSL24D1Q9UHA3 163 aaKnown RBP0.45□□□□□ -2.34
LINC01239-201ENST00000433645 RP1P56715 2156 aa0.45□□□□□ -2.34
LINC01239-201ENST00000433645 TRBV10-2A0A0K0K1G8 114 aa0.44□□□□□ -2.34
LINC01239-201ENST00000433645 COX7A2LO14548 114 aa0.44□□□□□ -2.34
LINC01239-201ENST00000433645 RNASE3P12724 160 aaKnown RBP0.44□□□□□ -2.34
LINC01239-201ENST00000433645 NFYAP23511 347 aaPredicted RBP0.44□□□□□ -2.34
LINC01239-201ENST00000433645 POLR2GP62487 172 aaKnown RBP eCLIP0.44□□□□□ -2.34
LINC01239-201ENST00000433645 JOSD1Q15040 202 aaPredicted RBP0.44□□□□□ -2.34
LINC01239-201ENST00000433645 SDHAF4Q5VUM1 108 aa0.44□□□□□ -2.34
LINC01239-201ENST00000433645 CLEC6AQ6EIG7 209 aa0.44□□□□□ -2.34
LINC01239-201ENST00000433645 SBSNQ6UWP8 590 aa0.44□□□□□ -2.34
LINC01239-201ENST00000433645 CD302Q8IX05 232 aa0.44□□□□□ -2.34
LINC01239-201ENST00000433645 RIBC1Q8N443 379 aaPredicted RBP0.44□□□□□ -2.34
LINC01239-201ENST00000433645 REG4Q9BYZ8 158 aa0.44□□□□□ -2.34
LINC01239-201ENST00000433645 MS4A6AQ9H2W1 248 aa0.44□□□□□ -2.34
LINC01239-201ENST00000433645 TREM1Q9NP99 234 aa0.44□□□□□ -2.34
LINC01239-201ENST00000433645 AK3Q9UIJ7 227 aa0.44□□□□□ -2.34
LINC01239-201ENST00000433645 PRELID1Q9Y255 219 aa0.44□□□□□ -2.34
LINC01239-201ENST00000433645 TNRC6BQ9UPQ9 1833 aaKnown RBP0.43□□□□□ -2.34
LINC01239-201ENST00000433645 IQCF5A8MTL0 148 aa0.43□□□□□ -2.34
LINC01239-201ENST00000433645 SDCBPO00560 298 aaPredicted RBP0.43□□□□□ -2.34
LINC01239-201ENST00000433645 ATP6V1G2O95670 118 aa0.43□□□□□ -2.34
LINC01239-201ENST00000433645 PPBPP02775 128 aa0.43□□□□□ -2.34
LINC01239-201ENST00000433645 DEFA4P12838 97 aa0.43□□□□□ -2.34
LINC01239-201ENST00000433645 HAAOP46952 286 aa0.43□□□□□ -2.34
LINC01239-201ENST00000433645 FXYD2P54710 66 aa0.43□□□□□ -2.34
LINC01239-201ENST00000433645 CXCR4P61073 352 aa0.43□□□□□ -2.34
LINC01239-201ENST00000433645 ANGPT1Q15389 498 aa0.43□□□□□ -2.34
LINC01239-201ENST00000433645 FAM27BQ5VT28 67 aa0.43□□□□□ -2.34
LINC01239-201ENST00000433645 BOD1L2Q8IYS8 172 aa0.43□□□□□ -2.34
LINC01239-201ENST00000433645 SLC22A24Q8N4F4 322 aa0.43□□□□□ -2.34
LINC01239-201ENST00000433645 UBL4BQ8N7F7 174 aa0.43□□□□□ -2.34
LINC01239-201ENST00000433645 TESCQ96BS2 214 aa0.43□□□□□ -2.34
LINC01239-201ENST00000433645 DHRS9Q9BPW9 319 aa0.43□□□□□ -2.34
LINC01239-201ENST00000433645 YIPF3Q9GZM5 350 aa0.43□□□□□ -2.34
LINC01239-201ENST00000433645 TRABDQ9H4I3 376 aa0.43□□□□□ -2.34
LINC01239-201ENST00000433645 HRASLSQ9HDD0 168 aa0.43□□□□□ -2.34
LINC01239-201ENST00000433645 NAT8Q9UHE5 227 aa0.43□□□□□ -2.34
LINC01239-201ENST00000433645 CFAP45Q9UL16 551 aa0.43□□□□□ -2.34
LINC01239-201ENST00000433645 SETD5Q9C0A6 1442 aa0.43□□□□□ -2.34
LINC01239-201ENST00000433645 RAD50Q92878 1312 aa0.42□□□□□ -2.34
LINC01239-201ENST00000433645 TRAPPC2LH3BP13 241 aa0.42□□□□□ -2.34
LINC01239-201ENST00000433645 ADAP1O75689 374 aa0.42□□□□□ -2.34
LINC01239-201ENST00000433645 C1QAP02745 245 aa0.42□□□□□ -2.34
LINC01239-201ENST00000433645 TFPTP0C1Z6 253 aa0.42□□□□□ -2.34
LINC01239-201ENST00000433645 METTL15P1P0C7V9 234 aa0.42□□□□□ -2.34
LINC01239-201ENST00000433645 RPL30P62888 115 aaKnown RBP0.42□□□□□ -2.34
LINC01239-201ENST00000433645 PMS2P3Q13401 168 aa0.42□□□□□ -2.34
LINC01239-201ENST00000433645 FAM78BQ5VT40 261 aa0.42□□□□□ -2.34
LINC01239-201ENST00000433645 TEX36Q5VZQ5 186 aa0.42□□□□□ -2.34
LINC01239-201ENST00000433645 C5orf46Q6UWT4 87 aa0.42□□□□□ -2.34
LINC01239-201ENST00000433645 SSX8Q7RTT4 187 aa0.42□□□□□ -2.34
LINC01239-201ENST00000433645 NAA40Q86UY6 237 aa0.42□□□□□ -2.34
LINC01239-201ENST00000433645 ZNF565Q8N9K5 539 aa0.42□□□□□ -2.34
LINC01239-201ENST00000433645 ZNF439Q8NDP4 499 aa0.42□□□□□ -2.34
LINC01239-201ENST00000433645 SGMS2Q8NHU3 365 aa0.42□□□□□ -2.34
LINC01239-201ENST00000433645 ACOT12Q8WYK0 555 aa0.42□□□□□ -2.34
LINC01239-201ENST00000433645 WDR54Q9H977 334 aa0.42□□□□□ -2.34
LINC01239-201ENST00000433645 SPACA1Q9HBV2 294 aa0.42□□□□□ -2.34
LINC01239-201ENST00000433645 GPR84Q9NQS5 396 aa0.42□□□□□ -2.34
LINC01239-201ENST00000433645 SYNRGQ9UMZ2 1314 aa0.41□□□□□ -2.34
LINC01239-201ENST00000433645 IGHV1-69-2A0A0G2JMI3 117 aa0.41□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms