RNA–Protein interactions for RNA: ENST00000428098.5

DDX39B-208, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-208ENST00000428098 CGB1A6NKQ9 187 aa8.44□□□□□ -1.06
DDX39B-208ENST00000428098 K7EMT4 169 aa8.44□□□□□ -1.06
DDX39B-208ENST00000428098 CHEK1O14757 476 aa8.44□□□□□ -1.06
DDX39B-208ENST00000428098 TGOLN2O43493 480 aa8.44□□□□□ -1.06
DDX39B-208ENST00000428098 C4BPBP20851 252 aa8.44□□□□□ -1.06
DDX39B-208ENST00000428098 RPS11P62280 158 aaKnown RBP eCLIP8.44□□□□□ -1.06
DDX39B-208ENST00000428098 CBX3Q13185 183 aa8.44□□□□□ -1.06
DDX39B-208ENST00000428098 IRF3Q14653 427 aa8.44□□□□□ -1.06
DDX39B-208ENST00000428098 FAM24BQ8N5W8 94 aa8.44□□□□□ -1.06
DDX39B-208ENST00000428098 OR6M1Q8NGM8 313 aa8.44□□□□□ -1.06
DDX39B-208ENST00000428098 OSR1Q8TAX0 266 aaPredicted RBP8.44□□□□□ -1.06
DDX39B-208ENST00000428098 TRUB1Q8WWH5 349 aaKnown RBP8.44□□□□□ -1.06
DDX39B-208ENST00000428098 CXorf58Q96LI9 332 aa8.44□□□□□ -1.06
DDX39B-208ENST00000428098 NICN1Q9BSH3 213 aa8.44□□□□□ -1.06
DDX39B-208ENST00000428098 RHPN1-AS1Q9BWJ2 59 aa8.44□□□□□ -1.06
DDX39B-208ENST00000428098 Q9N2K0 584 aa8.44□□□□□ -1.06
DDX39B-208ENST00000428098 AK3Q9UIJ7 227 aa8.44□□□□□ -1.06
DDX39B-208ENST00000428098 TCRBV3S1A0A5B6 114 aa8.43□□□□□ -1.06
DDX39B-208ENST00000428098 OR2T8A6NH00 312 aa8.43□□□□□ -1.06
DDX39B-208ENST00000428098 HIST1H1BP16401 226 aaKnown RBP8.43□□□□□ -1.06
DDX39B-208ENST00000428098 HOXB6P17509 224 aaKnown RBP8.43□□□□□ -1.06
DDX39B-208ENST00000428098 NPY1RP25929 384 aa8.43□□□□□ -1.06
DDX39B-208ENST00000428098 PTBP1P26599 531 aaKnown RBP eCLIP8.43□□□□□ -1.061e-69■■■■□ 20.2
DDX39B-208ENST00000428098 DUTP33316 252 aaKnown RBP8.43□□□□□ -1.06
DDX39B-208ENST00000428098 RPL27AP46776 148 aaKnown RBP8.43□□□□□ -1.06
DDX39B-208ENST00000428098 DEFB131AP59861 70 aa8.43□□□□□ -1.06
DDX39B-208ENST00000428098 RPL22L1Q6P5R6 122 aaKnown RBP8.43□□□□□ -1.06
DDX39B-208ENST00000428098 MORN3Q6PF18 240 aaPredicted RBP8.43□□□□□ -1.06
DDX39B-208ENST00000428098 MOB1BQ7L9L4 216 aa8.43□□□□□ -1.06
DDX39B-208ENST00000428098 SPATA24Q86W54 205 aa8.43□□□□□ -1.06
DDX39B-208ENST00000428098 MRPL48Q96GC5 212 aaKnown RBP8.43□□□□□ -1.06
DDX39B-208ENST00000428098 GABARAPL3Q9BY60 117 aa8.43□□□□□ -1.06
DDX39B-208ENST00000428098 YTHDF1Q9BYJ9 559 aaKnown RBP8.43□□□□□ -1.06
DDX39B-208ENST00000428098 FAM107BQ9H098 131 aa8.43□□□□□ -1.06
DDX39B-208ENST00000428098 GABARAPL1Q9H0R8 117 aa8.43□□□□□ -1.06
DDX39B-208ENST00000428098 OR51E2Q9H255 320 aa8.43□□□□□ -1.06
DDX39B-208ENST00000428098 AMBNQ9NP70 447 aa8.43□□□□□ -1.06
DDX39B-208ENST00000428098 TBC1D24Q9ULP9 559 aa8.43□□□□□ -1.06
DDX39B-208ENST00000428098 TRBV5-7A0A0A0MS05 114 aa8.42□□□□□ -1.06
DDX39B-208ENST00000428098 A0A0A6YYD4 124 aa8.42□□□□□ -1.06
DDX39B-208ENST00000428098 F8W735 103 aaPredicted RBP8.42□□□□□ -1.06
DDX39B-208ENST00000428098 NDUFA4O00483 81 aa8.42□□□□□ -1.06
DDX39B-208ENST00000428098 OGG1O15527 345 aa8.42□□□□□ -1.06
DDX39B-208ENST00000428098 SMR3BP02814 79 aaPredicted RBP8.42□□□□□ -1.06
DDX39B-208ENST00000428098 LIMS3P0CW19 117 aa8.42□□□□□ -1.06
DDX39B-208ENST00000428098 LIMS4P0CW20 117 aa8.42□□□□□ -1.06
DDX39B-208ENST00000428098 DEFA4P12838 97 aa8.42□□□□□ -1.06
DDX39B-208ENST00000428098 OR2G6Q5TZ20 316 aa8.42□□□□□ -1.06
DDX39B-208ENST00000428098 TRPT1Q86TN4 253 aaKnown RBP8.42□□□□□ -1.06
DDX39B-208ENST00000428098 CDH26Q8IXH8 852 aa8.42□□□□□ -1.06
DDX39B-208ENST00000428098 LILRB2Q8N423 598 aa8.42□□□□□ -1.06
DDX39B-208ENST00000428098 GIMAP1Q8WWP7 306 aa8.42□□□□□ -1.06
DDX39B-208ENST00000428098 FRZBQ92765 325 aa8.42□□□□□ -1.06
DDX39B-208ENST00000428098 ZNF503Q96F45 646 aa8.42□□□□□ -1.06
DDX39B-208ENST00000428098 FAM210BQ96KR6 192 aa8.42□□□□□ -1.06
DDX39B-208ENST00000428098 RIMS4Q9H426 269 aaPredicted RBP8.42□□□□□ -1.06
DDX39B-208ENST00000428098 KCNK15Q9H427 330 aa8.42□□□□□ -1.06
DDX39B-208ENST00000428098 IGHV3OR16-13A0A075B7E8 117 aa8.41□□□□□ -1.06
DDX39B-208ENST00000428098 IGHV3-74A0A0B4J1X5 117 aa8.41□□□□□ -1.06
DDX39B-208ENST00000428098 IGHV7-4-1A0A0J9YVY3 117 aa8.41□□□□□ -1.06
DDX39B-208ENST00000428098 RAB27BO00194 218 aa8.41□□□□□ -1.06
DDX39B-208ENST00000428098 DHFRP00374 187 aa8.41□□□□□ -1.06
DDX39B-208ENST00000428098 FUSP35637 526 aaKnown RBP eCLIP8.41□□□□□ -1.06
DDX39B-208ENST00000428098 PSMD7P51665 324 aa8.41□□□□□ -1.06
DDX39B-208ENST00000428098 TPBGQ13641 420 aa8.41□□□□□ -1.06
DDX39B-208ENST00000428098 CCDC58Q4VC31 144 aa8.41□□□□□ -1.06
DDX39B-208ENST00000428098 IGSF11Q5DX21 431 aa8.41□□□□□ -1.06
DDX39B-208ENST00000428098 LIPKQ5VXJ0 399 aa8.41□□□□□ -1.06
DDX39B-208ENST00000428098 ZNRF2Q8NHG8 242 aa8.41□□□□□ -1.06
DDX39B-208ENST00000428098 OR2A7Q96R45 310 aa8.41□□□□□ -1.06
DDX39B-208ENST00000428098 C15orf62A8K5M9 175 aa8.4□□□□□ -1.06
DDX39B-208ENST00000428098 SOCS1O15524 211 aa8.4□□□□□ -1.06
DDX39B-208ENST00000428098 CREBL2O60519 120 aaPredicted RBP8.4□□□□□ -1.06
DDX39B-208ENST00000428098 LALBAP00709 142 aa8.4□□□□□ -1.06
DDX39B-208ENST00000428098 UNC119Q13432 240 aa8.4□□□□□ -1.06
DDX39B-208ENST00000428098 Q499Y3 187 aa8.4□□□□□ -1.06
DDX39B-208ENST00000428098 MEDAGQ5VYS4 303 aa8.4□□□□□ -1.06
DDX39B-208ENST00000428098 STHQ8IWL8 128 aa8.4□□□□□ -1.06
DDX39B-208ENST00000428098 TMEM116Q8NCL8 245 aa8.4□□□□□ -1.06
DDX39B-208ENST00000428098 OR52I1Q8NGK6 324 aa8.4□□□□□ -1.06
DDX39B-208ENST00000428098 TMEM167AQ8TBQ9 72 aa8.4□□□□□ -1.06
DDX39B-208ENST00000428098 DCUN1D5Q9BTE7 237 aa8.4□□□□□ -1.06
DDX39B-208ENST00000428098 TM2D1Q9BX74 207 aa8.4□□□□□ -1.06
DDX39B-208ENST00000428098 RNF167Q9H6Y7 350 aa8.4□□□□□ -1.06
DDX39B-208ENST00000428098 TMEM14BQ9NUH8 114 aa8.4□□□□□ -1.06
DDX39B-208ENST00000428098 PLEKHJ1Q9NW61 149 aa8.4□□□□□ -1.06
DDX39B-208ENST00000428098 CKLFQ9UBR5 152 aa8.4□□□□□ -1.06
DDX39B-208ENST00000428098 KNCNA6PVL3 124 aa8.39□□□□□ -1.07
DDX39B-208ENST00000428098 TRDCB7Z8K6 153 aa8.39□□□□□ -1.07
DDX39B-208ENST00000428098 FCGR3BO75015 233 aa8.39□□□□□ -1.07
DDX39B-208ENST00000428098 KBTBD11O94819 623 aa8.39□□□□□ -1.07
DDX39B-208ENST00000428098 GABRB1P18505 474 aa8.39□□□□□ -1.07
DDX39B-208ENST00000428098 FAM3BP58499 235 aaPredicted RBP8.39□□□□□ -1.07
DDX39B-208ENST00000428098 RPL30P62888 115 aaKnown RBP8.39□□□□□ -1.07
DDX39B-208ENST00000428098 ATP6AP1Q15904 470 aa8.39□□□□□ -1.07
DDX39B-208ENST00000428098 AMIGO2Q86SJ2 522 aa8.39□□□□□ -1.07
DDX39B-208ENST00000428098 PUSL1Q8N0Z8 303 aaKnown RBP8.39□□□□□ -1.07
DDX39B-208ENST00000428098 VN1R17PQ8TDU5 208 aa8.39□□□□□ -1.07
DDX39B-208ENST00000428098 ADTRPQ96IZ2 230 aa8.39□□□□□ -1.07
DDX39B-208ENST00000428098 MYCBPQ99417 103 aaPredicted RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms