RNA–Protein interactions for RNA: ENST00000427383.6

CHEK1-202, Transcript of checkpoint kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CHEK1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-202ENST00000427383 E5RGE8 158 aa13.77□□□□□ -0.21
CHEK1-202ENST00000427383 SSSCA1O60232 199 aa13.77□□□□□ -0.21
CHEK1-202ENST00000427383 SNAPC5O75971 98 aa13.77□□□□□ -0.21
CHEK1-202ENST00000427383 VENTXO95231 258 aa13.77□□□□□ -0.21
CHEK1-202ENST00000427383 TMEM50AO95807 157 aa13.77□□□□□ -0.21
CHEK1-202ENST00000427383 AVPP01185 164 aa13.77□□□□□ -0.21
CHEK1-202ENST00000427383 IGHV1-69P01742 117 aa13.77□□□□□ -0.21
CHEK1-202ENST00000427383 RLN2P04090 185 aa13.77□□□□□ -0.21
CHEK1-202ENST00000427383 CD1BP29016 333 aa13.77□□□□□ -0.21
CHEK1-202ENST00000427383 ZNF429Q86V71 674 aa13.77□□□□□ -0.21
CHEK1-202ENST00000427383 MALSU1Q96EH3 234 aa13.77□□□□□ -0.21
CHEK1-202ENST00000427383 AQP10Q96PS8 301 aa13.77□□□□□ -0.21
CHEK1-202ENST00000427383 MFFQ9GZY8 342 aa13.77□□□□□ -0.21
CHEK1-202ENST00000427383 TMEM14BQ9NUH8 114 aa13.77□□□□□ -0.21
CHEK1-202ENST00000427383 MXRA5Q9NR99 2828 aa13.76□□□□□ -0.21
CHEK1-202ENST00000427383 J3QLI3 93 aa13.76□□□□□ -0.21
CHEK1-202ENST00000427383 OR2F2O95006 317 aa13.76□□□□□ -0.21
CHEK1-202ENST00000427383 OR2B8PP59922 312 aa13.76□□□□□ -0.21
CHEK1-202ENST00000427383 OR2F1Q13607 317 aa13.76□□□□□ -0.21
CHEK1-202ENST00000427383 ACOT7LQ6ZUV0 252 aa13.76□□□□□ -0.21
CHEK1-202ENST00000427383 FOXA2Q9Y261 457 aaPredicted RBP13.76□□□□□ -0.21
CHEK1-202ENST00000427383 L7N2F9 121 aa13.75□□□□□ -0.21
CHEK1-202ENST00000427383 SYNGR2O43760 224 aa13.75□□□□□ -0.21
CHEK1-202ENST00000427383 KBTBD11O94819 623 aa13.75□□□□□ -0.21
CHEK1-202ENST00000427383 IGHV4-38-2P0DP08 117 aa13.75□□□□□ -0.21
CHEK1-202ENST00000427383 LGALS7P47929 136 aa13.75□□□□□ -0.21
CHEK1-202ENST00000427383 PAX9P55771 341 aa13.75□□□□□ -0.21
CHEK1-202ENST00000427383 UBE2KP61086 200 aa13.75□□□□□ -0.21
CHEK1-202ENST00000427383 RPS16P62249 146 aaKnown RBP13.75□□□□□ -0.21
CHEK1-202ENST00000427383 KLF17Q5JT82 389 aaPredicted RBP13.75□□□□□ -0.21
CHEK1-202ENST00000427383 KCNRGQ8N5I3 272 aa13.75□□□□□ -0.21
CHEK1-202ENST00000427383 QTRT1Q9BXR0 403 aaKnown RBP13.75□□□□□ -0.21
CHEK1-202ENST00000427383 ABCA1O95477 2261 aa13.75□□□□□ -0.21
CHEK1-202ENST00000427383 UPK2O00526 184 aa13.75□□□□□ -0.21
CHEK1-202ENST00000427383 CHST1O43916 411 aa13.75□□□□□ -0.21
CHEK1-202ENST00000427383 TGFAP01135 160 aa13.75□□□□□ -0.21
CHEK1-202ENST00000427383 HKR1P10072 659 aa13.75□□□□□ -0.21
CHEK1-202ENST00000427383 P2RY1P47900 373 aa13.75□□□□□ -0.21
CHEK1-202ENST00000427383 FBLN7Q53RD9 439 aa13.75□□□□□ -0.21
CHEK1-202ENST00000427383 RUSC1-AS1Q66K80 236 aa13.75□□□□□ -0.21
CHEK1-202ENST00000427383 INO80EQ8NBZ0 244 aaPredicted RBP13.75□□□□□ -0.21
CHEK1-202ENST00000427383 OR52E5Q8NH55 327 aa13.75□□□□□ -0.21
CHEK1-202ENST00000427383 OR4A16Q8NH70 328 aa13.75□□□□□ -0.21
CHEK1-202ENST00000427383 RNF5Q99942 180 aa13.75□□□□□ -0.21
CHEK1-202ENST00000427383 CRYGBP07316 175 aa13.74□□□□□ -0.21
CHEK1-202ENST00000427383 FGF2P09038 288 aa13.74□□□□□ -0.21
CHEK1-202ENST00000427383 S100A11P31949 105 aa13.74□□□□□ -0.21
CHEK1-202ENST00000427383 EBI3Q14213 229 aa13.74□□□□□ -0.21
CHEK1-202ENST00000427383 MRGPRG-AS1Q2M3A8 158 aa13.74□□□□□ -0.21
CHEK1-202ENST00000427383 GPR157Q5UAW9 335 aa13.74□□□□□ -0.21
CHEK1-202ENST00000427383 CIARTQ8N365 385 aaPredicted RBP13.74□□□□□ -0.21
CHEK1-202ENST00000427383 VSTM2AQ8TAG5 236 aa13.74□□□□□ -0.21
CHEK1-202ENST00000427383 TMEM167AQ8TBQ9 72 aa13.74□□□□□ -0.21
CHEK1-202ENST00000427383 RAB40CQ96S21 281 aa13.74□□□□□ -0.21
CHEK1-202ENST00000427383 RBKSQ9H477 322 aa13.74□□□□□ -0.21
CHEK1-202ENST00000427383 LYRM2Q9NU23 88 aaPredicted RBP13.74□□□□□ -0.21
CHEK1-202ENST00000427383 WSB1Q9Y6I7 421 aa13.74□□□□□ -0.21
CHEK1-202ENST00000427383 A0A0D9SG52 128 aa13.73□□□□□ -0.21
CHEK1-202ENST00000427383 WRBO00258 174 aa13.73□□□□□ -0.21
CHEK1-202ENST00000427383 RBMXL2O75526 392 aaKnown RBP13.73□□□□□ -0.21
CHEK1-202ENST00000427383 PVALBP20472 110 aaPredicted RBP13.73□□□□□ -0.21
CHEK1-202ENST00000427383 CNTFRP26992 372 aa13.73□□□□□ -0.21
CHEK1-202ENST00000427383 AP2S1P53680 142 aaPredicted RBP13.73□□□□□ -0.21
CHEK1-202ENST00000427383 TMUB2Q71RG4 321 aa13.73□□□□□ -0.21
CHEK1-202ENST00000427383 OR4A5Q8NH83 315 aa13.73□□□□□ -0.21
CHEK1-202ENST00000427383 ARL6Q9H0F7 186 aa13.73□□□□□ -0.21
CHEK1-202ENST00000427383 TPSG1Q9NRR2 321 aa13.73□□□□□ -0.21
CHEK1-202ENST00000427383 CACFD1Q9UGQ2 172 aa13.73□□□□□ -0.21
CHEK1-202ENST00000427383 ZNF257Q9Y2Q1 563 aa13.73□□□□□ -0.21
CHEK1-202ENST00000427383 MYO9AB2RTY4 2548 aa13.73□□□□□ -0.21
CHEK1-202ENST00000427383 IGHV3OR16-10A0A075B7F0 116 aa13.72□□□□□ -0.21
CHEK1-202ENST00000427383 SLC25A17O43808 307 aa13.72□□□□□ -0.21
CHEK1-202ENST00000427383 IGKV1D-33P01593 117 aa13.72□□□□□ -0.21
CHEK1-202ENST00000427383 IGKV1-33P01594 117 aa13.72□□□□□ -0.21
CHEK1-202ENST00000427383 RPL12P30050 165 aaKnown RBP13.72□□□□□ -0.21
CHEK1-202ENST00000427383 BRD3OSQ6XYD6 125 aa13.72□□□□□ -0.21
CHEK1-202ENST00000427383 OR2C3Q8N628 320 aa13.72□□□□□ -0.21
CHEK1-202ENST00000427383 Q8N6K4 173 aa13.72□□□□□ -0.21
CHEK1-202ENST00000427383 ZDHHC16Q969W1 377 aa13.72□□□□□ -0.21
CHEK1-202ENST00000427383 PRNDQ9UKY0 176 aa13.72□□□□□ -0.21
CHEK1-202ENST00000427383 CSPG4Q6UVK1 2322 aa13.72□□□□□ -0.21
CHEK1-202ENST00000427383 SPDEFO95238 335 aa13.72□□□□□ -0.21
CHEK1-202ENST00000427383 MOSP00540 346 aa13.72□□□□□ -0.21
CHEK1-202ENST00000427383 SNRNP70P08621 437 aaKnown RBP13.72□□□□□ -0.21
CHEK1-202ENST00000427383 TAS2R30P59541 319 aa13.72□□□□□ -0.21
CHEK1-202ENST00000427383 SPCS3P61009 180 aa13.72□□□□□ -0.21
CHEK1-202ENST00000427383 PSG5Q15238 335 aa13.72□□□□□ -0.21
CHEK1-202ENST00000427383 VMA21Q3ZAQ7 101 aa13.72□□□□□ -0.21
CHEK1-202ENST00000427383 TEX45Q8NA69 505 aa13.72□□□□□ -0.21
CHEK1-202ENST00000427383 EAF1Q96JC9 268 aaPredicted RBP13.72□□□□□ -0.21
CHEK1-202ENST00000427383 SMIM8Q96KF7 97 aa13.72□□□□□ -0.21
CHEK1-202ENST00000427383 TSNAXQ99598 290 aaKnown RBP13.72□□□□□ -0.21
CHEK1-202ENST00000427383 TCF19Q9Y242 345 aa13.72□□□□□ -0.21
CHEK1-202ENST00000427383 MED6O75586 246 aa13.71□□□□□ -0.21
CHEK1-202ENST00000427383 NDUFA3O95167 84 aa13.71□□□□□ -0.21
CHEK1-202ENST00000427383 FSHBP01225 129 aa13.71□□□□□ -0.21
CHEK1-202ENST00000427383 IAPPP10997 89 aa13.71□□□□□ -0.21
CHEK1-202ENST00000427383 CD24P25063 80 aa13.71□□□□□ -0.21
CHEK1-202ENST00000427383 RPL8P62917 257 aaKnown RBP13.71□□□□□ -0.21
CHEK1-202ENST00000427383 IFITM2Q01629 132 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms