RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 OVOL2Q9BRP0 275 aa12.4□□□□□ -0.42
PTPN13-203ENST00000427191 P2RY4P51582 365 aa12.4□□□□□ -0.42
PTPN13-203ENST00000427191 Q6ZS52 159 aa12.4□□□□□ -0.42
PTPN13-203ENST00000427191 A0A1W2PRD5 423 aa12.4□□□□□ -0.43
PTPN13-203ENST00000427191 A0A1W2PRF3 423 aa12.4□□□□□ -0.43
PTPN13-203ENST00000427191 A0A1W2PRM7 423 aa12.4□□□□□ -0.43
PTPN13-203ENST00000427191 AGFG2O95081 481 aa12.4□□□□□ -0.43
PTPN13-203ENST00000427191 EFNB2P52799 333 aa12.4□□□□□ -0.43
PTPN13-203ENST00000427191 STARD6P59095 220 aa12.4□□□□□ -0.43
PTPN13-203ENST00000427191 SCGB3A1Q96QR1 104 aa12.4□□□□□ -0.43
PTPN13-203ENST00000427191 KMT2EQ8IZD2 1858 aa12.39□□□□□ -0.43
PTPN13-203ENST00000427191 ADRA2AP08913 450 aa12.39□□□□□ -0.43
PTPN13-203ENST00000427191 LILRA6Q6PI73 481 aa12.39□□□□□ -0.43
PTPN13-203ENST00000427191 DIDO1Q9BTC0 2240 aaKnown RBP12.39□□□□□ -0.43
PTPN13-203ENST00000427191 APCDD1LQ8NCL9 501 aa12.39□□□□□ -0.43
PTPN13-203ENST00000427191 SPCS1Q9Y6A9 102 aa12.39□□□□□ -0.43
PTPN13-203ENST00000427191 NKX2-8O15522 239 aa12.39□□□□□ -0.43
PTPN13-203ENST00000427191 CA1P00915 261 aaPredicted RBP12.39□□□□□ -0.43
PTPN13-203ENST00000427191 CD300CQ08708 224 aa12.39□□□□□ -0.43
PTPN13-203ENST00000427191 TBR1Q16650 682 aa12.39□□□□□ -0.43
PTPN13-203ENST00000427191 CACNA1IQ9P0X4 2223 aa12.39□□□□□ -0.43
PTPN13-203ENST00000427191 MEX3AA1L020 520 aaKnown RBP12.39□□□□□ -0.43
PTPN13-203ENST00000427191 PLNP26678 52 aa12.39□□□□□ -0.43
PTPN13-203ENST00000427191 GCHFRP30047 84 aa12.39□□□□□ -0.43
PTPN13-203ENST00000427191 FAM57AQ8TBR7 257 aa12.39□□□□□ -0.43
PTPN13-203ENST00000427191 FOXH1O75593 365 aa12.39□□□□□ -0.43
PTPN13-203ENST00000427191 SLC25A53Q5H9E4 307 aa12.39□□□□□ -0.43
PTPN13-203ENST00000427191 BIVMQ86UB2 503 aa12.39□□□□□ -0.43
PTPN13-203ENST00000427191 VKORC1L1Q8N0U8 176 aa12.39□□□□□ -0.43
PTPN13-203ENST00000427191 FAM74A4Q5TZK3 123 aa12.39□□□□□ -0.43
PTPN13-203ENST00000427191 ZNF71Q9NQZ8 489 aaPredicted RBP12.39□□□□□ -0.43
PTPN13-203ENST00000427191 CARHSP1Q9Y2V2 147 aaKnown RBP12.39□□□□□ -0.43
PTPN13-203ENST00000427191 HILPDAQ9Y5L2 63 aa12.39□□□□□ -0.43
PTPN13-203ENST00000427191 CRYBB3P26998 211 aa12.38□□□□□ -0.43
PTPN13-203ENST00000427191 NABP2Q9BQ15 211 aa12.38□□□□□ -0.43
PTPN13-203ENST00000427191 GP6Q9HCN6 339 aa12.38□□□□□ -0.43
PTPN13-203ENST00000427191 LIMS1P48059 325 aa12.38□□□□□ -0.43
PTPN13-203ENST00000427191 UCN2Q96RP3 112 aa12.38□□□□□ -0.43
PTPN13-203ENST00000427191 MGST2Q99735 147 aa12.38□□□□□ -0.43
PTPN13-203ENST00000427191 A0A1W2PP11 408 aa12.38□□□□□ -0.43
PTPN13-203ENST00000427191 PSG4Q00888 419 aa12.38□□□□□ -0.43
PTPN13-203ENST00000427191 DCAF12L2Q5VW00 463 aa12.38□□□□□ -0.43
PTPN13-203ENST00000427191 GOLT1AQ6ZVE7 132 aa12.38□□□□□ -0.43
PTPN13-203ENST00000427191 CACNG8Q8WXS5 425 aa12.38□□□□□ -0.43
PTPN13-203ENST00000427191 CCL27Q9Y4X3 112 aa12.38□□□□□ -0.43
PTPN13-203ENST00000427191 RNF182Q8N6D2 247 aa12.38□□□□□ -0.43
PTPN13-203ENST00000427191 OSR1Q8TAX0 266 aaPredicted RBP12.38□□□□□ -0.43
PTPN13-203ENST00000427191 FBLIM1Q8WUP2 373 aa12.38□□□□□ -0.43
PTPN13-203ENST00000427191 CCL13Q99616 98 aa12.38□□□□□ -0.43
PTPN13-203ENST00000427191 F12P00748 615 aaPredicted RBP12.38□□□□□ -0.43
PTPN13-203ENST00000427191 S100A7L2Q5SY68 101 aa12.38□□□□□ -0.43
PTPN13-203ENST00000427191 TMEM74BQ9NUR3 256 aa12.38□□□□□ -0.43
PTPN13-203ENST00000427191 TBL2Q9Y4P3 447 aaKnown RBP12.38□□□□□ -0.43
PTPN13-203ENST00000427191 H0YL77 283 aa12.38□□□□□ -0.43
PTPN13-203ENST00000427191 RNASEH2CQ8TDP1 164 aaKnown RBP12.38□□□□□ -0.43
PTPN13-203ENST00000427191 FAM60AQ9NP50 221 aa12.38□□□□□ -0.43
PTPN13-203ENST00000427191 YBX2Q9Y2T7 364 aaKnown RBP12.38□□□□□ -0.43
PTPN13-203ENST00000427191 IGHV3-21A0A0B4J1V1 117 aa12.38□□□□□ -0.43
PTPN13-203ENST00000427191 CTAG1AP78358 180 aa12.38□□□□□ -0.43
PTPN13-203ENST00000427191 HCP5Q6MZN7 132 aa12.38□□□□□ -0.43
PTPN13-203ENST00000427191 TCF19Q9Y242 345 aa12.38□□□□□ -0.43
PTPN13-203ENST00000427191 THY1P04216 161 aa12.37□□□□□ -0.43
PTPN13-203ENST00000427191 OR4D11Q8NGI4 311 aa12.37□□□□□ -0.43
PTPN13-203ENST00000427191 WDYHV1Q96HA8 205 aa12.37□□□□□ -0.43
PTPN13-203ENST00000427191 Q96M66 194 aa12.37□□□□□ -0.43
PTPN13-203ENST00000427191 IMMP2LQ96T52 175 aa12.37□□□□□ -0.43
PTPN13-203ENST00000427191 DOPEY2Q9Y3R5 2298 aa12.37□□□□□ -0.43
PTPN13-203ENST00000427191 TRAV8-6A0A0B4J262 113 aa12.37□□□□□ -0.43
PTPN13-203ENST00000427191 PPBPP02775 128 aa12.37□□□□□ -0.43
PTPN13-203ENST00000427191 NANOS3P60323 173 aaKnown RBP12.37□□□□□ -0.43
PTPN13-203ENST00000427191 DERL1Q9BUN8 251 aa12.37□□□□□ -0.43
PTPN13-203ENST00000427191 CD200R1LQ6Q8B3 271 aa12.37□□□□□ -0.43
PTPN13-203ENST00000427191 LINC00305Q7Z4B0 112 aa12.37□□□□□ -0.43
PTPN13-203ENST00000427191 TLNRD1Q9H1K6 362 aa12.37□□□□□ -0.43
PTPN13-203ENST00000427191 TRBV5-7A0A0A0MS05 114 aa12.37□□□□□ -0.43
PTPN13-203ENST00000427191 UNC119Q13432 240 aa12.37□□□□□ -0.43
PTPN13-203ENST00000427191 RTN4RL2Q86UN3 420 aa12.37□□□□□ -0.43
PTPN13-203ENST00000427191 TMPRSS3P57727 454 aa12.37□□□□□ -0.43
PTPN13-203ENST00000427191 UNQ9370/PRO34162Q6UXP9 181 aa12.37□□□□□ -0.43
PTPN13-203ENST00000427191 SPAG8Q99932 426 aaPredicted RBP12.37□□□□□ -0.43
PTPN13-203ENST00000427191 C5orf66Q9H5L9 145 aa12.37□□□□□ -0.43
PTPN13-203ENST00000427191 ELOVL5Q9NYP7 299 aa12.37□□□□□ -0.43
PTPN13-203ENST00000427191 LINC00587B1AMM8 73 aa12.37□□□□□ -0.43
PTPN13-203ENST00000427191 TMEM229AB2RXF0 380 aa12.37□□□□□ -0.43
PTPN13-203ENST00000427191 SCTP09683 121 aa12.37□□□□□ -0.43
PTPN13-203ENST00000427191 C1orf53Q5VUE5 145 aa12.37□□□□□ -0.43
PTPN13-203ENST00000427191 DTX2Q86UW9 622 aa12.37□□□□□ -0.43
PTPN13-203ENST00000427191 CHD3Q12873 2000 aaKnown RBP12.37□□□□□ -0.43
PTPN13-203ENST00000427191 ZNF688P0C7X2 276 aa12.36□□□□□ -0.43
PTPN13-203ENST00000427191 CYP2G1PQ6ZSU1 146 aa12.36□□□□□ -0.43
PTPN13-203ENST00000427191 DTX1Q86Y01 620 aa12.36□□□□□ -0.43
PTPN13-203ENST00000427191 RPP21Q9H633 154 aaKnown RBP12.36□□□□□ -0.43
PTPN13-203ENST00000427191 CTSSP25774 331 aa12.36□□□□□ -0.43
PTPN13-203ENST00000427191 RALGAPA2Q2PPJ7 1873 aa12.36□□□□□ -0.43
PTPN13-203ENST00000427191 C1QL3Q5VWW1 255 aa12.36□□□□□ -0.43
PTPN13-203ENST00000427191 KLK15Q9H2R5 256 aa12.36□□□□□ -0.43
PTPN13-203ENST00000427191 SLC25A47Q6Q0C1 308 aa12.36□□□□□ -0.43
PTPN13-203ENST00000427191 ANAPC13Q9BS18 74 aa12.36□□□□□ -0.43
PTPN13-203ENST00000427191 DCTN5Q9BTE1 182 aa12.36□□□□□ -0.43
PTPN13-203ENST00000427191 RNF115Q9Y4L5 304 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms