RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 OR10G9Q8NGN4 311 aa13.49□□□□□ -0.25
PKP4-205ENST00000426248 OR10G7Q8NGN6 311 aa13.49□□□□□ -0.25
PKP4-205ENST00000426248 SMIM12Q96EX1 92 aa13.49□□□□□ -0.25
PKP4-205ENST00000426248 LIME1Q9H400 295 aa13.49□□□□□ -0.25
PKP4-205ENST00000426248 TRAV39A0A0B4J263 110 aa13.48□□□□□ -0.25
PKP4-205ENST00000426248 NDUFB8O95169 186 aa13.48□□□□□ -0.25
PKP4-205ENST00000426248 GPM6AP51674 278 aa13.48□□□□□ -0.25
PKP4-205ENST00000426248 PP6455Q8WZ26 134 aa13.48□□□□□ -0.25
PKP4-205ENST00000426248 C18orf12Q96KH6 178 aa13.48□□□□□ -0.25
PKP4-205ENST00000426248 TRAPPC2LH3BP13 241 aa13.48□□□□□ -0.25
PKP4-205ENST00000426248 GNG7O60262 68 aa13.48□□□□□ -0.25
PKP4-205ENST00000426248 CA6P23280 308 aa13.48□□□□□ -0.25
PKP4-205ENST00000426248 FOXF2Q12947 444 aa13.48□□□□□ -0.25
PKP4-205ENST00000426248 PIGYQ3MUY2 71 aa13.48□□□□□ -0.25
PKP4-205ENST00000426248 CLCF1Q9UBD9 225 aa13.48□□□□□ -0.25
PKP4-205ENST00000426248 HSPB7Q9UBY9 170 aa13.48□□□□□ -0.25
PKP4-205ENST00000426248 FAM90A27PA6NNH2 459 aa13.48□□□□□ -0.25
PKP4-205ENST00000426248 OTX1P32242 354 aaPredicted RBP13.48□□□□□ -0.25
PKP4-205ENST00000426248 PLA2G5P39877 138 aa13.48□□□□□ -0.25
PKP4-205ENST00000426248 RELBQ01201 579 aa13.48□□□□□ -0.25
PKP4-205ENST00000426248 OR4D5Q8NGN0 318 aa13.48□□□□□ -0.25
PKP4-205ENST00000426248 PINX1Q96BK5 328 aaKnown RBP13.48□□□□□ -0.25
PKP4-205ENST00000426248 WDR61Q9GZS3 305 aaKnown RBP13.48□□□□□ -0.25
PKP4-205ENST00000426248 CSTL1Q9H114 145 aa13.48□□□□□ -0.25
PKP4-205ENST00000426248 GCM1Q9NP62 436 aa13.48□□□□□ -0.25
PKP4-205ENST00000426248 ZNF581Q9P0T4 197 aa13.48□□□□□ -0.25
PKP4-205ENST00000426248 CACNG5Q9UF02 275 aa13.48□□□□□ -0.25
PKP4-205ENST00000426248 DPRXA6NFQ7 191 aa13.47□□□□□ -0.25
PKP4-205ENST00000426248 VSTM5A8MXK1 200 aa13.47□□□□□ -0.25
PKP4-205ENST00000426248 KRTCAP3Q53RY4 240 aa13.47□□□□□ -0.25
PKP4-205ENST00000426248 C16orf54Q6UWD8 224 aa13.47□□□□□ -0.25
PKP4-205ENST00000426248 SLC24A4Q8NFF2 622 aa13.47□□□□□ -0.25
PKP4-205ENST00000426248 ST3GAL6Q9Y274 331 aa13.47□□□□□ -0.25
PKP4-205ENST00000426248 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.47□□□□□ -0.25
PKP4-205ENST00000426248 AMMECR1LQ6DCA0 310 aa13.47□□□□□ -0.25
PKP4-205ENST00000426248 TEX43Q6ZNM6 134 aa13.47□□□□□ -0.25
PKP4-205ENST00000426248 NCOA6Q14686 2063 aaPredicted RBP13.47□□□□□ -0.25
PKP4-205ENST00000426248 FREM2Q5SZK8 3169 aa13.47□□□□□ -0.25
PKP4-205ENST00000426248 VDAC1P21796 283 aa13.47□□□□□ -0.25
PKP4-205ENST00000426248 LCN12Q6JVE5 192 aa13.47□□□□□ -0.25
PKP4-205ENST00000426248 TMEM222Q9H0R3 208 aa13.47□□□□□ -0.25
PKP4-205ENST00000426248 NRN1Q9NPD7 142 aa13.47□□□□□ -0.25
PKP4-205ENST00000426248 FBXL7Q9UJT9 491 aa13.47□□□□□ -0.25
PKP4-205ENST00000426248 C5orf63A6NC05 138 aa13.46□□□□□ -0.25
PKP4-205ENST00000426248 HSBP1O75506 76 aa13.46□□□□□ -0.25
PKP4-205ENST00000426248 PDLIM4P50479 330 aa13.46□□□□□ -0.25
PKP4-205ENST00000426248 ACSF3Q4G176 576 aaPredicted RBP13.46□□□□□ -0.25
PKP4-205ENST00000426248 CLEC18AA5D8T8 446 aa13.46□□□□□ -0.25
PKP4-205ENST00000426248 TMEM50AO95807 157 aa13.46□□□□□ -0.25
PKP4-205ENST00000426248 CLEC18CQ8NCF0 446 aa13.46□□□□□ -0.25
PKP4-205ENST00000426248 NUDT16L1Q9BRJ7 211 aaKnown RBP13.46□□□□□ -0.25
PKP4-205ENST00000426248 F2Z2F3 143 aa13.46□□□□□ -0.26
PKP4-205ENST00000426248 SLC17A3O00476 420 aa13.46□□□□□ -0.26
PKP4-205ENST00000426248 LY6DQ14210 128 aa13.46□□□□□ -0.26
PKP4-205ENST00000426248 OR10G8Q8NGN5 311 aa13.46□□□□□ -0.26
PKP4-205ENST00000426248 TMEM45BQ96B21 275 aa13.46□□□□□ -0.26
PKP4-205ENST00000426248 CCL28Q9NRJ3 127 aa13.46□□□□□ -0.26
PKP4-205ENST00000426248 TNRC6BQ9UPQ9 1833 aaKnown RBP13.46□□□□□ -0.26
PKP4-205ENST00000426248 LCN2P80188 198 aa13.45□□□□□ -0.26
PKP4-205ENST00000426248 Q6ZS92 163 aa13.45□□□□□ -0.26
PKP4-205ENST00000426248 ZNF808Q8N4W9 903 aaPredicted RBP13.45□□□□□ -0.26
PKP4-205ENST00000426248 SLC45A2Q9UMX9 530 aa13.45□□□□□ -0.26
PKP4-205ENST00000426248 LOC105371242A0A075B767 164 aa13.45□□□□□ -0.26
PKP4-205ENST00000426248 SLC38A11Q08AI6 406 aa13.45□□□□□ -0.26
PKP4-205ENST00000426248 BHLHA15Q7RTS1 189 aaPredicted RBP13.45□□□□□ -0.26
PKP4-205ENST00000426248 C1orf174Q8IYL3 243 aa13.45□□□□□ -0.26
PKP4-205ENST00000426248 ZDHHC23Q8IYP9 409 aa13.45□□□□□ -0.26
PKP4-205ENST00000426248 RBMXL3Q8N7X1 1067 aaKnown RBP13.45□□□□□ -0.26
PKP4-205ENST00000426248 OR52L2PQ8NGH6 319 aa13.45□□□□□ -0.26
PKP4-205ENST00000426248 OR4C12Q96R67 309 aa13.45□□□□□ -0.26
PKP4-205ENST00000426248 IGKV1-9A0A0C4DH69 117 aa13.45□□□□□ -0.26
PKP4-205ENST00000426248 A0A1W2PN81 502 aa13.45□□□□□ -0.26
PKP4-205ENST00000426248 NABP1Q96AH0 204 aa13.45□□□□□ -0.26
PKP4-205ENST00000426248 TSPOP30536 169 aa13.45□□□□□ -0.26
PKP4-205ENST00000426248 MGAQ8IWI9 3026 aa13.44□□□□□ -0.26
PKP4-205ENST00000426248 M0R1X1 148 aa13.44□□□□□ -0.26
PKP4-205ENST00000426248 NUDT3O95989 172 aa13.44□□□□□ -0.26
PKP4-205ENST00000426248 PRDX4Q13162 271 aa13.44□□□□□ -0.26
PKP4-205ENST00000426248 SNRNP40Q96DI7 357 aaKnown RBP13.44□□□□□ -0.26
PKP4-205ENST00000426248 PXMP4Q9Y6I8 212 aa13.44□□□□□ -0.26
PKP4-205ENST00000426248 NUP210LQ5VU65 1888 aa13.44□□□□□ -0.26
PKP4-205ENST00000426248 IGHV2OR16-5A0A0B4J2B6 119 aa13.44□□□□□ -0.26
PKP4-205ENST00000426248 OR7C2O60412 319 aa13.44□□□□□ -0.26
PKP4-205ENST00000426248 IGLC2P0DOY2 106 aa13.44□□□□□ -0.26
PKP4-205ENST00000426248 IGLC3P0DOY3 106 aa13.44□□□□□ -0.26
PKP4-205ENST00000426248 ZNF726P1Q15940 193 aa13.44□□□□□ -0.26
PKP4-205ENST00000426248 PRR30Q53SZ7 412 aaPredicted RBP13.44□□□□□ -0.26
PKP4-205ENST00000426248 SELENOHQ8IZQ5 122 aaKnown RBP13.44□□□□□ -0.26
PKP4-205ENST00000426248 PRR7Q8TB68 274 aa13.44□□□□□ -0.26
PKP4-205ENST00000426248 CCDC168Q8NDH2 2452 aa13.44□□□□□ -0.26
PKP4-205ENST00000426248 RPL24P83731 157 aaKnown RBP13.44□□□□□ -0.26
PKP4-205ENST00000426248 MRPL54Q6P161 138 aaKnown RBP13.44□□□□□ -0.26
PKP4-205ENST00000426248 RND1Q92730 232 aa13.44□□□□□ -0.26
PKP4-205ENST00000426248 UHRF2Q96PU4 802 aa13.44□□□□□ -0.26
PKP4-205ENST00000426248 C2CD3Q4AC94 2353 aa13.44□□□□□ -0.26
PKP4-205ENST00000426248 TUSC2O75896 110 aa13.43□□□□□ -0.26
PKP4-205ENST00000426248 COX5AP20674 150 aa13.43□□□□□ -0.26
PKP4-205ENST00000426248 GABRA6Q16445 453 aa13.43□□□□□ -0.26
PKP4-205ENST00000426248 RPRMLQ8N4K4 120 aa13.43□□□□□ -0.26
PKP4-205ENST00000426248 LINC00470Q9BZP3 86 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms