RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 MLNRO43193 412 aa11.16□□□□□ -0.62
USP42-203ENST00000426246 ENSAO43768 121 aaKnown RBP11.16□□□□□ -0.62
USP42-203ENST00000426246 CD1BP29016 333 aa11.16□□□□□ -0.62
USP42-203ENST00000426246 DLX1P56177 255 aa11.16□□□□□ -0.62
USP42-203ENST00000426246 Q6P435 159 aa11.16□□□□□ -0.62
USP42-203ENST00000426246 TMEM178AQ8NBL3 297 aa11.16□□□□□ -0.62
USP42-203ENST00000426246 BCL2L2Q92843 193 aaPredicted RBP11.16□□□□□ -0.62
USP42-203ENST00000426246 NPCDR1Q9BY65 106 aa11.16□□□□□ -0.62
USP42-203ENST00000426246 ASH1LQ9NR48 2969 aaKnown RBP11.16□□□□□ -0.62
USP42-203ENST00000426246 IGHV3-72A0A0B4J1Y9 119 aa11.16□□□□□ -0.62
USP42-203ENST00000426246 PPIHO43447 177 aaKnown RBP11.16□□□□□ -0.62
USP42-203ENST00000426246 DDTP30046 118 aa11.16□□□□□ -0.62
USP42-203ENST00000426246 ERVFC1-1P60608 527 aa11.16□□□□□ -0.62
USP42-203ENST00000426246 ZNF718Q3SXZ3 478 aa11.16□□□□□ -0.62
USP42-203ENST00000426246 MRPL54Q6P161 138 aaKnown RBP11.16□□□□□ -0.62
USP42-203ENST00000426246 SCO2A0A1W2PP80 73 aa11.15□□□□□ -0.62
USP42-203ENST00000426246 PMCHP20382 165 aa11.15□□□□□ -0.62
USP42-203ENST00000426246 PRDX2P32119 198 aa11.15□□□□□ -0.62
USP42-203ENST00000426246 IER3P46695 156 aa11.15□□□□□ -0.62
USP42-203ENST00000426246 KRTDAPP60985 99 aa11.15□□□□□ -0.62
USP42-203ENST00000426246 HTD2P86397 168 aa11.15□□□□□ -0.62
USP42-203ENST00000426246 KRTAP27-1Q3LI81 207 aa11.15□□□□□ -0.62
USP42-203ENST00000426246 SPRNQ5BIV9 151 aa11.15□□□□□ -0.62
USP42-203ENST00000426246 COLCA1Q6ZS62 124 aa11.15□□□□□ -0.62
USP42-203ENST00000426246 RPRMLQ8N4K4 120 aa11.15□□□□□ -0.62
USP42-203ENST00000426246 ZNF114Q8NC26 417 aa11.15□□□□□ -0.62
USP42-203ENST00000426246 ANKHD1Q8IWZ3 2542 aaKnown RBP11.15□□□□□ -0.62
USP42-203ENST00000426246 IGHV2-70P01814 119 aa11.15□□□□□ -0.62
USP42-203ENST00000426246 CECR9P0C854 216 aa11.15□□□□□ -0.62
USP42-203ENST00000426246 CISD1Q9NZ45 108 aaKnown RBP11.15□□□□□ -0.62
USP42-203ENST00000426246 LRBAP50851 2863 aa11.15□□□□□ -0.62
USP42-203ENST00000426246 ACOT6Q3I5F7 207 aaPredicted RBP11.15□□□□□ -0.63
USP42-203ENST00000426246 KCNIP4Q6PIL6 250 aa11.15□□□□□ -0.63
USP42-203ENST00000426246 ZNF497Q6ZNH5 498 aa11.15□□□□□ -0.63
USP42-203ENST00000426246 LURAP1Q96LR2 239 aa11.15□□□□□ -0.63
USP42-203ENST00000426246 OR2V2Q96R30 315 aa11.15□□□□□ -0.63
USP42-203ENST00000426246 DCAF16Q9NXF7 216 aa11.15□□□□□ -0.63
USP42-203ENST00000426246 CTXND1A0A1B0GTU2 59 aa11.14□□□□□ -0.63
USP42-203ENST00000426246 C17orf112F2Z3M2 114 aa11.14□□□□□ -0.63
USP42-203ENST00000426246 SMIM21Q3B7S5 101 aa11.14□□□□□ -0.63
USP42-203ENST00000426246 DOLPP1Q86YN1 238 aa11.14□□□□□ -0.63
USP42-203ENST00000426246 COQ2Q96H96 371 aa11.14□□□□□ -0.63
USP42-203ENST00000426246 CCL13Q99616 98 aa11.14□□□□□ -0.63
USP42-203ENST00000426246 TGIF2LYQ8IUE0 185 aa11.14□□□□□ -0.63
USP42-203ENST00000426246 ATOH7Q8N100 152 aa11.14□□□□□ -0.63
USP42-203ENST00000426246 ZNF645Q8N7E2 425 aa11.14□□□□□ -0.63
USP42-203ENST00000426246 OR1P1Q8NH06 330 aa11.14□□□□□ -0.63
USP42-203ENST00000426246 EGLN1Q9GZT9 426 aa11.14□□□□□ -0.63
USP42-203ENST00000426246 SSUH2Q9Y2M2 353 aa11.14□□□□□ -0.63
USP42-203ENST00000426246 TMPRSS2O15393 492 aa11.14□□□□□ -0.63
USP42-203ENST00000426246 SLC31A2O15432 143 aa11.14□□□□□ -0.63
USP42-203ENST00000426246 FOXH1O75593 365 aa11.14□□□□□ -0.63
USP42-203ENST00000426246 CA1P00915 261 aaPredicted RBP11.14□□□□□ -0.63
USP42-203ENST00000426246 AMBPP02760 352 aa11.14□□□□□ -0.63
USP42-203ENST00000426246 OR4A8P0C604 315 aa11.14□□□□□ -0.63
USP42-203ENST00000426246 C9orf106Q8NAJ2 232 aa11.14□□□□□ -0.63
USP42-203ENST00000426246 MS4A10Q96PG2 267 aa11.14□□□□□ -0.63
USP42-203ENST00000426246 SSBP3Q9BWW4 388 aaPredicted RBP11.14□□□□□ -0.63
USP42-203ENST00000426246 SEBOXQ9HB31 216 aaPredicted RBP11.14□□□□□ -0.63
USP42-203ENST00000426246 OOEPA6NGQ2 149 aa11.13□□□□□ -0.63
USP42-203ENST00000426246 IGLV2-14P01704 120 aa11.13□□□□□ -0.63
USP42-203ENST00000426246 FRMD6-AS1P0C7T7 363 aa11.13□□□□□ -0.63
USP42-203ENST00000426246 PSG5Q15238 335 aa11.13□□□□□ -0.63
USP42-203ENST00000426246 Q6ZSR3 168 aa11.13□□□□□ -0.63
USP42-203ENST00000426246 PXMP4Q9Y6I8 212 aa11.13□□□□□ -0.63
USP42-203ENST00000426246 ARHGAP32A7KAX9 2087 aa11.13□□□□□ -0.63
USP42-203ENST00000426246 ZNF891A8MT65 544 aaPredicted RBP11.13□□□□□ -0.63
USP42-203ENST00000426246 KBTBD11O94819 623 aa11.13□□□□□ -0.63
USP42-203ENST00000426246 IGHG3P01860 377 aa11.13□□□□□ -0.63
USP42-203ENST00000426246 REG1AP05451 166 aa11.13□□□□□ -0.63
USP42-203ENST00000426246 SERF2P84101 59 aa11.13□□□□□ -0.63
USP42-203ENST00000426246 FAM214BQ7L5A3 538 aa11.13□□□□□ -0.63
USP42-203ENST00000426246 VN1R17PQ8TDU5 208 aa11.13□□□□□ -0.63
USP42-203ENST00000426246 MISP3Q96FF7 219 aa11.13□□□□□ -0.63
USP42-203ENST00000426246 LINC00470Q9BZP3 86 aa11.13□□□□□ -0.63
USP42-203ENST00000426246 MS4A5Q9H3V2 200 aa11.13□□□□□ -0.63
USP42-203ENST00000426246 SIRT7Q9NRC8 400 aa11.13□□□□□ -0.63
USP42-203ENST00000426246 WFDC8Q8IUA0 241 aa11.13□□□□□ -0.63
USP42-203ENST00000426246 TGIF2LXQ8IUE1 241 aa11.13□□□□□ -0.63
USP42-203ENST00000426246 ITLN1Q8WWA0 313 aa11.13□□□□□ -0.63
USP42-203ENST00000426246 DMRT1Q9Y5R6 373 aa11.13□□□□□ -0.63
USP42-203ENST00000426246 FCN1O00602 326 aa11.12□□□□□ -0.63
USP42-203ENST00000426246 PNRC1Q12796 327 aaPredicted RBP11.12□□□□□ -0.63
USP42-203ENST00000426246 DPPA3Q6W0C5 159 aa11.12□□□□□ -0.63
USP42-203ENST00000426246 ZNF600Q6ZNG1 722 aa11.12□□□□□ -0.63
USP42-203ENST00000426246 KIR3DL3Q8N743 410 aa11.12□□□□□ -0.63
USP42-203ENST00000426246 CSMD1Q96PZ7 3565 aa11.12□□□□□ -0.63
USP42-203ENST00000426246 PITPNC1Q9UKF7 332 aa11.12□□□□□ -0.63
USP42-203ENST00000426246 C5orf30Q96GV9 206 aa11.12□□□□□ -0.63
USP42-203ENST00000426246 C14orf144Q96I85 54 aa11.12□□□□□ -0.63
USP42-203ENST00000426246 CGAP01215 116 aa11.11□□□□□ -0.63
USP42-203ENST00000426246 OR5G3P0C626 314 aa11.11□□□□□ -0.63
USP42-203ENST00000426246 IRF2P14316 349 aa11.11□□□□□ -0.63
USP42-203ENST00000426246 CASP6P55212 293 aa11.11□□□□□ -0.63
USP42-203ENST00000426246 SUMO1P63165 101 aaKnown RBP11.11□□□□□ -0.63
USP42-203ENST00000426246 CTAG1AP78358 180 aa11.11□□□□□ -0.63
USP42-203ENST00000426246 WDR82Q6UXN9 313 aa11.11□□□□□ -0.63
USP42-203ENST00000426246 BLNKQ8WV28 456 aa11.11□□□□□ -0.63
USP42-203ENST00000426246 CCL17Q92583 94 aa11.11□□□□□ -0.63
USP42-203ENST00000426246 TMEM18Q96B42 140 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms