RNA–Protein interactions for RNA: ENST00000426142.6

CTNND1-207, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-207ENST00000426142 CX3CL1P78423 397 aa6.7□□□□□ -1.34
CTNND1-207ENST00000426142 ZNF660Q6AZW8 331 aaPredicted RBP6.7□□□□□ -1.34
CTNND1-207ENST00000426142 A0A087WV48 116 aa6.7□□□□□ -1.34
CTNND1-207ENST00000426142 ELOA3CA0A087WX78 387 aaPredicted RBP6.7□□□□□ -1.34
CTNND1-207ENST00000426142 FAM74A7A6NL05 159 aa6.7□□□□□ -1.34
CTNND1-207ENST00000426142 GPX1P07203 203 aa6.7□□□□□ -1.34
CTNND1-207ENST00000426142 AREGP15514 252 aa6.7□□□□□ -1.34
CTNND1-207ENST00000426142 CRYBB3P26998 211 aa6.7□□□□□ -1.34
CTNND1-207ENST00000426142 FHITP49789 147 aa6.7□□□□□ -1.34
CTNND1-207ENST00000426142 DLX1P56177 255 aa6.7□□□□□ -1.34
CTNND1-207ENST00000426142 ZFP36L1Q07352 338 aaKnown RBP6.7□□□□□ -1.34
CTNND1-207ENST00000426142 TEX29Q8N6K0 151 aa6.7□□□□□ -1.34
CTNND1-207ENST00000426142 RAB24Q969Q5 203 aa6.7□□□□□ -1.34
CTNND1-207ENST00000426142 C1QTNF5Q9BXJ0 243 aa6.7□□□□□ -1.34
CTNND1-207ENST00000426142 HSPB8Q9UJY1 196 aa6.7□□□□□ -1.34
CTNND1-207ENST00000426142 AHCTF1Q8WYP5 2266 aa6.7□□□□□ -1.34
CTNND1-207ENST00000426142 LINC00862A6NCI5 91 aa6.7□□□□□ -1.34
CTNND1-207ENST00000426142 TGFAP01135 160 aa6.7□□□□□ -1.34
CTNND1-207ENST00000426142 AMY1AP04745 511 aa6.7□□□□□ -1.34
CTNND1-207ENST00000426142 NPPCP23582 126 aa6.7□□□□□ -1.34
CTNND1-207ENST00000426142 ZNF146Q15072 292 aa6.7□□□□□ -1.34
CTNND1-207ENST00000426142 TMEM177Q53S58 311 aa6.7□□□□□ -1.34
CTNND1-207ENST00000426142 DNM1P46Q6ZS02 220 aa6.7□□□□□ -1.34
CTNND1-207ENST00000426142 SYT8Q8NBV8 401 aa6.7□□□□□ -1.34
CTNND1-207ENST00000426142 RAX2Q96IS3 184 aa6.7□□□□□ -1.34
CTNND1-207ENST00000426142 NEU1Q99519 415 aa6.7□□□□□ -1.34
CTNND1-207ENST00000426142 C7orf69Q9H7B7 122 aa6.7□□□□□ -1.34
CTNND1-207ENST00000426142 GP6Q9HCN6 339 aa6.7□□□□□ -1.34
CTNND1-207ENST00000426142 MEF2BQ02080 365 aaPredicted RBP6.7□□□□□ -1.34
CTNND1-207ENST00000426142 FAM74A4Q5TZK3 123 aa6.7□□□□□ -1.34
CTNND1-207ENST00000426142 WDR25Q64LD2 544 aaPredicted RBP6.7□□□□□ -1.34
CTNND1-207ENST00000426142 LINC00114Q6XXX2 140 aa6.7□□□□□ -1.34
CTNND1-207ENST00000426142 ZNF502Q8TBZ5 544 aa6.7□□□□□ -1.34
CTNND1-207ENST00000426142 NRIP2Q9BQI9 281 aa6.7□□□□□ -1.34
CTNND1-207ENST00000426142 PHLDA3Q9Y5J5 127 aa6.7□□□□□ -1.34
CTNND1-207ENST00000426142 TRAV30A0A087WSZ9 112 aa6.7□□□□□ -1.34
CTNND1-207ENST00000426142 C17orf98A8MV24 154 aa6.7□□□□□ -1.34
CTNND1-207ENST00000426142 A8MWL6 223 aa6.7□□□□□ -1.34
CTNND1-207ENST00000426142 PSG9Q00887 426 aa6.7□□□□□ -1.34
CTNND1-207ENST00000426142 COX19Q49B96 90 aa6.7□□□□□ -1.34
CTNND1-207ENST00000426142 PAM16Q9Y3D7 125 aa6.7□□□□□ -1.34
CTNND1-207ENST00000426142 IGLV3-12A0A075B6K2 115 aa6.69□□□□□ -1.34
CTNND1-207ENST00000426142 IGKV3OR2-268A0A0C4DH90 116 aa6.69□□□□□ -1.34
CTNND1-207ENST00000426142 RRHO14718 337 aa6.69□□□□□ -1.34
CTNND1-207ENST00000426142 C8orf88P0DMB2 117 aa6.69□□□□□ -1.34
CTNND1-207ENST00000426142 ANOS1P23352 680 aa6.69□□□□□ -1.34
CTNND1-207ENST00000426142 CKS2P33552 79 aa6.69□□□□□ -1.34
CTNND1-207ENST00000426142 NMUP48645 174 aa6.69□□□□□ -1.34
CTNND1-207ENST00000426142 C1QTNF12Q5T7M4 302 aa6.69□□□□□ -1.34
CTNND1-207ENST00000426142 AMMECR1LQ6DCA0 310 aa6.69□□□□□ -1.34
CTNND1-207ENST00000426142 FAM53AQ6NSI3 398 aaPredicted RBP6.69□□□□□ -1.34
CTNND1-207ENST00000426142 ZDBF2Q9HCK1 2354 aa6.69□□□□□ -1.34
CTNND1-207ENST00000426142 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.69□□□□□ -1.34
CTNND1-207ENST00000426142 M0R3E3 92 aa6.69□□□□□ -1.34
CTNND1-207ENST00000426142 CCL3L1P16619 93 aa6.69□□□□□ -1.34
CTNND1-207ENST00000426142 CD24P25063 80 aa6.69□□□□□ -1.34
CTNND1-207ENST00000426142 LINC00305Q7Z4B0 112 aa6.69□□□□□ -1.34
CTNND1-207ENST00000426142 POC1AQ8NBT0 407 aa6.69□□□□□ -1.34
CTNND1-207ENST00000426142 OR51G1Q8NGK1 321 aa6.69□□□□□ -1.34
CTNND1-207ENST00000426142 OR1N2Q8NGR9 330 aa6.69□□□□□ -1.34
CTNND1-207ENST00000426142 SRSF12Q8WXF0 261 aaKnown RBP6.69□□□□□ -1.34
CTNND1-207ENST00000426142 NABP2Q9BQ15 211 aa6.69□□□□□ -1.34
CTNND1-207ENST00000426142 SLC25A33Q9BSK2 321 aa6.69□□□□□ -1.34
CTNND1-207ENST00000426142 FOXI3A8MTJ6 420 aaPredicted RBP6.69□□□□□ -1.34
CTNND1-207ENST00000426142 J3QW42 95 aa6.69□□□□□ -1.34
CTNND1-207ENST00000426142 KLF7O75840 302 aaPredicted RBP6.69□□□□□ -1.34
CTNND1-207ENST00000426142 CD74P04233 296 aa6.69□□□□□ -1.34
CTNND1-207ENST00000426142 HIST1H1AQ02539 215 aaPredicted RBP6.69□□□□□ -1.34
CTNND1-207ENST00000426142 RELQ04864 619 aaPredicted RBP6.69□□□□□ -1.34
CTNND1-207ENST00000426142 GOLT1AQ6ZVE7 132 aa6.69□□□□□ -1.34
CTNND1-207ENST00000426142 C1orf162Q8NEQ5 155 aaPredicted RBP6.69□□□□□ -1.34
CTNND1-207ENST00000426142 MRPL20Q9BYC9 149 aaKnown RBP6.69□□□□□ -1.34
CTNND1-207ENST00000426142 FOXA2Q9Y261 457 aaPredicted RBP6.69□□□□□ -1.34
CTNND1-207ENST00000426142 C17orf100A8MU93 164 aa6.69□□□□□ -1.34
CTNND1-207ENST00000426142 FAM90A26D6RGX4 464 aa6.69□□□□□ -1.34
CTNND1-207ENST00000426142 EGR1P18146 543 aa6.69□□□□□ -1.34
CTNND1-207ENST00000426142 CSRP1P21291 193 aaKnown RBP6.69□□□□□ -1.34
CTNND1-207ENST00000426142 NEU4Q8WWR8 484 aaPredicted RBP6.69□□□□□ -1.34
CTNND1-207ENST00000426142 ICE1Q9Y2F5 2266 aa6.69□□□□□ -1.34
CTNND1-207ENST00000426142 CFDP00746 253 aaPredicted RBP6.68□□□□□ -1.34
CTNND1-207ENST00000426142 MEOX2P50222 304 aa6.68□□□□□ -1.34
CTNND1-207ENST00000426142 FOXF2Q12947 444 aa6.68□□□□□ -1.34
CTNND1-207ENST00000426142 OR11H4Q8NGC9 324 aa6.68□□□□□ -1.34
CTNND1-207ENST00000426142 REPIN1Q9BWE0 567 aaKnown RBP6.68□□□□□ -1.34
CTNND1-207ENST00000426142 DPM3Q9P2X0 92 aa6.68□□□□□ -1.34
CTNND1-207ENST00000426142 LOC102723996A0A087X1L8 192 aa6.68□□□□□ -1.34
CTNND1-207ENST00000426142 ZNF324O75467 553 aaPredicted RBP6.68□□□□□ -1.34
CTNND1-207ENST00000426142 RPS11P62280 158 aaKnown RBP eCLIP6.68□□□□□ -1.34
CTNND1-207ENST00000426142 OR4A47Q6IF82 309 aa6.68□□□□□ -1.34
CTNND1-207ENST00000426142 SMIM8Q96KF7 97 aa6.68□□□□□ -1.34
CTNND1-207ENST00000426142 AQP10Q96PS8 301 aa6.68□□□□□ -1.34
CTNND1-207ENST00000426142 BET1LQ9NYM9 111 aa6.68□□□□□ -1.34
CTNND1-207ENST00000426142 A0A0G2JK05 382 aa6.68□□□□□ -1.34
CTNND1-207ENST00000426142 KBTBD11-OT1A0A1B0GTJ5 212 aa6.68□□□□□ -1.34
CTNND1-207ENST00000426142 NMBP08949 121 aa6.68□□□□□ -1.34
CTNND1-207ENST00000426142 ZNF383Q8NA42 475 aa6.68□□□□□ -1.34
CTNND1-207ENST00000426142 TGIF2-C20orf24A0A0A6YYL0 155 aa6.68□□□□□ -1.34
CTNND1-207ENST00000426142 H3BVH4 76 aa6.68□□□□□ -1.34
CTNND1-207ENST00000426142 NTN3O00634 580 aaPredicted RBP6.68□□□□□ -1.34
CTNND1-207ENST00000426142 IGHV3-11P01762 117 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms