RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 ERVK-16P61578 105 aa6.25□□□□□ -1.41
SMARCC1-202ENST00000425518 VWC2Q2TAL6 325 aa6.25□□□□□ -1.41
SMARCC1-202ENST00000425518 DHRS13Q6UX07 377 aa6.25□□□□□ -1.41
SMARCC1-202ENST00000425518 Q8N7P7 452 aa6.25□□□□□ -1.41
SMARCC1-202ENST00000425518 OR10G8Q8NGN5 311 aa6.25□□□□□ -1.41
SMARCC1-202ENST00000425518 KCNIP2Q9NS61 270 aa6.25□□□□□ -1.41
SMARCC1-202ENST00000425518 C21orf140B9A014 251 aa6.25□□□□□ -1.41
SMARCC1-202ENST00000425518 SPINK4O60575 86 aa6.25□□□□□ -1.41
SMARCC1-202ENST00000425518 ADMP35318 185 aa6.25□□□□□ -1.41
SMARCC1-202ENST00000425518 SOX8P57073 446 aa6.25□□□□□ -1.41
SMARCC1-202ENST00000425518 RPL15P61313 204 aaKnown RBP6.25□□□□□ -1.41
SMARCC1-202ENST00000425518 SMIM21Q3B7S5 101 aa6.25□□□□□ -1.41
SMARCC1-202ENST00000425518 PEAR1Q5VY43 1037 aaPredicted RBP6.25□□□□□ -1.41
SMARCC1-202ENST00000425518 SPATA31B1PQ5VZV4 182 aa6.25□□□□□ -1.41
SMARCC1-202ENST00000425518 CD177Q8N6Q3 437 aa6.25□□□□□ -1.41
SMARCC1-202ENST00000425518 MDS2Q8NDY4 140 aa6.25□□□□□ -1.41
SMARCC1-202ENST00000425518 GMPPAQ96IJ6 420 aaPredicted RBP6.25□□□□□ -1.41
SMARCC1-202ENST00000425518 FER1L6-AS2Q96M78 137 aa6.25□□□□□ -1.41
SMARCC1-202ENST00000425518 HES4Q9HCC6 221 aa6.25□□□□□ -1.41
SMARCC1-202ENST00000425518 LOC400499M0QZD8 3231 aa6.25□□□□□ -1.41
SMARCC1-202ENST00000425518 ACTL6BO94805 426 aa6.25□□□□□ -1.41
SMARCC1-202ENST00000425518 RPL29P47914 159 aaKnown RBP6.25□□□□□ -1.41
SMARCC1-202ENST00000425518 SPCS3P61009 180 aa6.25□□□□□ -1.41
SMARCC1-202ENST00000425518 RPP30P78346 268 aaKnown RBP6.25□□□□□ -1.41
SMARCC1-202ENST00000425518 ZNF705AQ6ZN79 300 aaPredicted RBP6.25□□□□□ -1.41
SMARCC1-202ENST00000425518 OR2Z1Q8NG97 314 aa6.25□□□□□ -1.41
SMARCC1-202ENST00000425518 TBX15Q96SF7 602 aa6.25□□□□□ -1.41
SMARCC1-202ENST00000425518 MGST2Q99735 147 aa6.25□□□□□ -1.41
SMARCC1-202ENST00000425518 ELOVL5Q9NYP7 299 aa6.25□□□□□ -1.41
SMARCC1-202ENST00000425518 CNOT1A5YKK6 2376 aaKnown RBP6.25□□□□□ -1.41
SMARCC1-202ENST00000425518 ROS1P08922 2347 aa6.24□□□□□ -1.41
SMARCC1-202ENST00000425518 J3QW42 95 aa6.24□□□□□ -1.41
SMARCC1-202ENST00000425518 HPRT1P00492 218 aa6.24□□□□□ -1.41
SMARCC1-202ENST00000425518 INO80CQ6PI98 192 aaPredicted RBP6.24□□□□□ -1.41
SMARCC1-202ENST00000425518 FAM122AQ96E09 287 aa6.24□□□□□ -1.41
SMARCC1-202ENST00000425518 S1PR3Q99500 378 aa6.24□□□□□ -1.41
SMARCC1-202ENST00000425518 NAGKQ9UJ70 344 aa6.24□□□□□ -1.41
SMARCC1-202ENST00000425518 FOXH1O75593 365 aa6.24□□□□□ -1.41
SMARCC1-202ENST00000425518 PAX1P15863 534 aa6.24□□□□□ -1.41
SMARCC1-202ENST00000425518 RPL31P62899 125 aaKnown RBP6.24□□□□□ -1.41
SMARCC1-202ENST00000425518 FOXL1Q12952 345 aa6.24□□□□□ -1.41
SMARCC1-202ENST00000425518 VWA1Q6PCB0 445 aa6.24□□□□□ -1.41
SMARCC1-202ENST00000425518 TCTEX1D1Q8N7M0 179 aa6.24□□□□□ -1.41
SMARCC1-202ENST00000425518 BEND2Q8NDZ0 799 aa6.24□□□□□ -1.41
SMARCC1-202ENST00000425518 CMTM2Q8TAZ6 248 aa6.24□□□□□ -1.41
SMARCC1-202ENST00000425518 IER2Q9BTL4 223 aa6.24□□□□□ -1.41
SMARCC1-202ENST00000425518 GGTLC1Q9BX51 225 aa6.24□□□□□ -1.41
SMARCC1-202ENST00000425518 SEPSECSQ9HD40 501 aaKnown RBP6.24□□□□□ -1.41
SMARCC1-202ENST00000425518 TP53TG5Q9Y2B4 290 aa6.24□□□□□ -1.41
SMARCC1-202ENST00000425518 YTHDF2Q9Y5A9 579 aaKnown RBP6.24□□□□□ -1.41
SMARCC1-202ENST00000425518 TMPRSS2O15393 492 aa6.24□□□□□ -1.41
SMARCC1-202ENST00000425518 CXorf1O96002 111 aa6.24□□□□□ -1.41
SMARCC1-202ENST00000425518 ADH4P08319 380 aa6.24□□□□□ -1.41
SMARCC1-202ENST00000425518 OPRK1P41145 380 aa6.24□□□□□ -1.41
SMARCC1-202ENST00000425518 HLA-DRB5Q30154 266 aa6.24□□□□□ -1.41
SMARCC1-202ENST00000425518 ZNF718Q3SXZ3 478 aa6.24□□□□□ -1.41
SMARCC1-202ENST00000425518 LBHQ53QV2 105 aaPredicted RBP6.24□□□□□ -1.41
SMARCC1-202ENST00000425518 TOMM20LQ6UXN7 152 aa6.24□□□□□ -1.41
SMARCC1-202ENST00000425518 FAM214BQ7L5A3 538 aa6.24□□□□□ -1.41
SMARCC1-202ENST00000425518 TMEM144Q7Z5S9 345 aa6.24□□□□□ -1.41
SMARCC1-202ENST00000425518 BAGE3Q86Y29 109 aa6.24□□□□□ -1.41
SMARCC1-202ENST00000425518 BAGE2Q86Y30 109 aa6.24□□□□□ -1.41
SMARCC1-202ENST00000425518 ZNRF1Q8ND25 227 aa6.24□□□□□ -1.41
SMARCC1-202ENST00000425518 OR4P4Q8NGL7 312 aa6.24□□□□□ -1.41
SMARCC1-202ENST00000425518 Q8TCH9 128 aa6.24□□□□□ -1.41
SMARCC1-202ENST00000425518 SNHG12Q9BXW3 62 aa6.24□□□□□ -1.41
SMARCC1-202ENST00000425518 TMEM140Q9NV12 185 aa6.24□□□□□ -1.41
SMARCC1-202ENST00000425518 POLR3KQ9Y2Y1 108 aaPredicted RBP6.24□□□□□ -1.41
SMARCC1-202ENST00000425518 HEATR1Q9H583 2144 aaKnown RBP6.24□□□□□ -1.41
SMARCC1-202ENST00000425518 C15orf65H3BRN8 121 aa6.23□□□□□ -1.41
SMARCC1-202ENST00000425518 GFRA3O60609 400 aa6.23□□□□□ -1.41
SMARCC1-202ENST00000425518 FRMD6-AS1P0C7T7 363 aa6.23□□□□□ -1.41
SMARCC1-202ENST00000425518 STAG3L2P0CL84 134 aa6.23□□□□□ -1.41
SMARCC1-202ENST00000425518 STAG3L3P0CL85 134 aa6.23□□□□□ -1.41
SMARCC1-202ENST00000425518 CD99P14209 185 aa6.23□□□□□ -1.41
SMARCC1-202ENST00000425518 MYOD1P15172 320 aa6.23□□□□□ -1.41
SMARCC1-202ENST00000425518 ZNF134P52741 427 aa6.23□□□□□ -1.41
SMARCC1-202ENST00000425518 OR5I1Q13606 314 aa6.23□□□□□ -1.41
SMARCC1-202ENST00000425518 MORN2Q502X0 79 aa6.23□□□□□ -1.41
SMARCC1-202ENST00000425518 DIRC2Q96SL1 478 aa6.23□□□□□ -1.41
SMARCC1-202ENST00000425518 TCF19Q9Y242 345 aa6.23□□□□□ -1.41
SMARCC1-202ENST00000425518 ASPMQ8IZT6 3477 aa6.23□□□□□ -1.41
SMARCC1-202ENST00000425518 LNP1A1A4G5 178 aa6.23□□□□□ -1.41
SMARCC1-202ENST00000425518 IL6RP08887 468 aaPredicted RBP6.23□□□□□ -1.41
SMARCC1-202ENST00000425518 CECR9P0C854 216 aa6.23□□□□□ -1.41
SMARCC1-202ENST00000425518 TIMP3P35625 211 aa6.23□□□□□ -1.41
SMARCC1-202ENST00000425518 IER3P46695 156 aa6.23□□□□□ -1.41
SMARCC1-202ENST00000425518 CCL11P51671 97 aa6.23□□□□□ -1.41
SMARCC1-202ENST00000425518 ERVFC1-1P60608 527 aa6.23□□□□□ -1.41
SMARCC1-202ENST00000425518 UTF1Q5T230 341 aa6.23□□□□□ -1.41
SMARCC1-202ENST00000425518 VHLLQ6RSH7 139 aa6.23□□□□□ -1.41
SMARCC1-202ENST00000425518 Q6ZT83 130 aa6.23□□□□□ -1.41
SMARCC1-202ENST00000425518 TMEM178AQ8NBL3 297 aa6.23□□□□□ -1.41
SMARCC1-202ENST00000425518 BTF3L4Q96K17 158 aa6.23□□□□□ -1.41
SMARCC1-202ENST00000425518 NPVFQ9HCQ7 196 aa6.23□□□□□ -1.41
SMARCC1-202ENST00000425518 M0R143 59 aa6.23□□□□□ -1.41
SMARCC1-202ENST00000425518 FCN1O00602 326 aa6.23□□□□□ -1.41
SMARCC1-202ENST00000425518 MPDU1O75352 247 aa6.23□□□□□ -1.41
SMARCC1-202ENST00000425518 CRISP2P16562 243 aa6.23□□□□□ -1.41
SMARCC1-202ENST00000425518 GCHFRP30047 84 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms