RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-205ENST00000425443 WT1P19544 449 aaPredicted RBP10.86□□□□□ -0.67
COL12A1-205ENST00000425443 HTD2P86397 168 aa10.86□□□□□ -0.67
COL12A1-205ENST00000425443 ADIRFQ15847 76 aa10.86□□□□□ -0.67
COL12A1-205ENST00000425443 LRRC75BQ2VPJ9 315 aa10.86□□□□□ -0.67
COL12A1-205ENST00000425443 RPP25LQ8N5L8 163 aaKnown RBP10.86□□□□□ -0.67
COL12A1-205ENST00000425443 MBD3L1Q8WWY6 194 aa10.86□□□□□ -0.67
COL12A1-205ENST00000425443 DCTN5Q9BTE1 182 aa10.86□□□□□ -0.67
COL12A1-205ENST00000425443 PROCRQ9UNN8 238 aa10.86□□□□□ -0.67
COL12A1-205ENST00000425443 NPIPB11E5RHQ5 1161 aa10.85□□□□□ -0.67
COL12A1-205ENST00000425443 MLNRO43193 412 aa10.85□□□□□ -0.67
COL12A1-205ENST00000425443 CECR9P0C854 216 aa10.85□□□□□ -0.67
COL12A1-205ENST00000425443 RND2P52198 227 aa10.85□□□□□ -0.67
COL12A1-205ENST00000425443 HBG1P69891 147 aa10.85□□□□□ -0.67
COL12A1-205ENST00000425443 HBG2P69892 147 aa10.85□□□□□ -0.67
COL12A1-205ENST00000425443 RTP5Q14D33 572 aa10.85□□□□□ -0.67
COL12A1-205ENST00000425443 OR10G4Q8NGN3 311 aa10.85□□□□□ -0.67
COL12A1-205ENST00000425443 LHX4Q969G2 390 aa10.85□□□□□ -0.67
COL12A1-205ENST00000425443 LSM10Q969L4 123 aaKnown RBP10.85□□□□□ -0.67
COL12A1-205ENST00000425443 MAP1LC3B2A6NCE7 125 aa10.85□□□□□ -0.67
COL12A1-205ENST00000425443 PRR33A8MZF0 331 aa10.85□□□□□ -0.67
COL12A1-205ENST00000425443 SSTR5P35346 364 aa10.85□□□□□ -0.67
COL12A1-205ENST00000425443 SLC38A11Q08AI6 406 aa10.85□□□□□ -0.67
COL12A1-205ENST00000425443 PRSS8Q16651 343 aa10.85□□□□□ -0.67
COL12A1-205ENST00000425443 PRAMEF5Q5TYX0 476 aa10.85□□□□□ -0.67
COL12A1-205ENST00000425443 ACSM6Q6P461 480 aa10.85□□□□□ -0.67
COL12A1-205ENST00000425443 ERASQ7Z444 233 aa10.85□□□□□ -0.67
COL12A1-205ENST00000425443 MAP1LC3BQ9GZQ8 125 aa10.85□□□□□ -0.67
COL12A1-205ENST00000425443 WDR61Q9GZS3 305 aaKnown RBP10.85□□□□□ -0.67
COL12A1-205ENST00000425443 GNG7O60262 68 aa10.84□□□□□ -0.67
COL12A1-205ENST00000425443 SLC25A6P12236 298 aa10.84□□□□□ -0.67
COL12A1-205ENST00000425443 RPL30P62888 115 aaKnown RBP10.84□□□□□ -0.67
COL12A1-205ENST00000425443 PIP4P1Q86T03 277 aa10.84□□□□□ -0.67
COL12A1-205ENST00000425443 MBNL3Q9NUK0 354 aaKnown RBP10.84□□□□□ -0.67
COL12A1-205ENST00000425443 AURKAIP1Q9NWT8 199 aaPredicted RBP10.84□□□□□ -0.67
COL12A1-205ENST00000425443 WIPI2Q9Y4P8 454 aa10.84□□□□□ -0.67
COL12A1-205ENST00000425443 OOEPA6NGQ2 149 aa10.84□□□□□ -0.67
COL12A1-205ENST00000425443 C12orf77C9JDV5 145 aa10.84□□□□□ -0.67
COL12A1-205ENST00000425443 SCGB1D1O95968 90 aa10.84□□□□□ -0.67
COL12A1-205ENST00000425443 HBZP02008 142 aa10.84□□□□□ -0.67
COL12A1-205ENST00000425443 CATR1Q13166 79 aa10.84□□□□□ -0.67
COL12A1-205ENST00000425443 COL5A1-AS1Q5SY13 56 aa10.84□□□□□ -0.67
COL12A1-205ENST00000425443 IGF2-ASQ6U949 168 aa10.84□□□□□ -0.67
COL12A1-205ENST00000425443 ZADH2Q8N4Q0 377 aa10.84□□□□□ -0.67
COL12A1-205ENST00000425443 WDR31Q8NA23 367 aa10.84□□□□□ -0.67
COL12A1-205ENST00000425443 SLC39A9Q9NUM3 307 aa10.84□□□□□ -0.67
COL12A1-205ENST00000425443 ELOA3CA0A087WX78 387 aaPredicted RBP10.84□□□□□ -0.67
COL12A1-205ENST00000425443 CLDN34H7C241 214 aa10.84□□□□□ -0.67
COL12A1-205ENST00000425443 S1PR2O95136 353 aa10.84□□□□□ -0.67
COL12A1-205ENST00000425443 IGKV3-15P01624 115 aa10.84□□□□□ -0.67
COL12A1-205ENST00000425443 SMIM21Q3B7S5 101 aa10.84□□□□□ -0.67
COL12A1-205ENST00000425443 C1orf87Q8N0U7 546 aa10.84□□□□□ -0.67
COL12A1-205ENST00000425443 OR2Z1Q8NG97 314 aa10.84□□□□□ -0.67
COL12A1-205ENST00000425443 HINT2Q9BX68 163 aa10.84□□□□□ -0.67
COL12A1-205ENST00000425443 METRNQ9UJH8 293 aa10.84□□□□□ -0.67
COL12A1-205ENST00000425443 BRWD1-AS2P59051 145 aa10.83□□□□□ -0.68
COL12A1-205ENST00000425443 OCIAD2Q56VL3 154 aa10.83□□□□□ -0.68
COL12A1-205ENST00000425443 ZNF645Q8N7E2 425 aa10.83□□□□□ -0.68
COL12A1-205ENST00000425443 PINX1Q96BK5 328 aaKnown RBP10.83□□□□□ -0.68
COL12A1-205ENST00000425443 ZG16O60844 167 aa10.83□□□□□ -0.68
COL12A1-205ENST00000425443 ZNF737O75373 536 aa10.83□□□□□ -0.68
COL12A1-205ENST00000425443 COL10A1Q03692 680 aa10.83□□□□□ -0.68
COL12A1-205ENST00000425443 MSMO1Q15800 293 aa10.83□□□□□ -0.68
COL12A1-205ENST00000425443 ACSF3Q4G176 576 aaPredicted RBP10.83□□□□□ -0.68
COL12A1-205ENST00000425443 TMEM41BQ5BJD5 291 aa10.83□□□□□ -0.68
COL12A1-205ENST00000425443 ACP7Q6ZNF0 438 aa10.83□□□□□ -0.68
COL12A1-205ENST00000425443 OR4X1Q8NH49 305 aa10.83□□□□□ -0.68
COL12A1-205ENST00000425443 ZCCHC14Q8WYQ9 949 aaKnown RBP10.83□□□□□ -0.68
COL12A1-205ENST00000425443 TAF15Q92804 592 aaKnown RBP eCLIP10.83□□□□□ -0.68
COL12A1-205ENST00000425443 CITED1Q99966 193 aa10.83□□□□□ -0.68
COL12A1-205ENST00000425443 YLPM1P49750 1951 aaKnown RBP10.83□□□□□ -0.68
COL12A1-205ENST00000425443 C17orf98A8MV24 154 aa10.82□□□□□ -0.68
COL12A1-205ENST00000425443 B4DEV8 164 aa10.82□□□□□ -0.68
COL12A1-205ENST00000425443 WDR82Q6UXN9 313 aa10.82□□□□□ -0.68
COL12A1-205ENST00000425443 C16orf82Q7Z2V1 217 aa10.82□□□□□ -0.68
COL12A1-205ENST00000425443 LRRC29Q8WV35 223 aa10.82□□□□□ -0.68
COL12A1-205ENST00000425443 SMIM7Q9BQ49 75 aa10.82□□□□□ -0.68
COL12A1-205ENST00000425443 PSMG3Q9BT73 122 aaPredicted RBP10.82□□□□□ -0.68
COL12A1-205ENST00000425443 VAX2Q9UIW0 290 aa10.82□□□□□ -0.68
COL12A1-205ENST00000425443 PSG11Q9UQ72 335 aa10.82□□□□□ -0.68
COL12A1-205ENST00000425443 ZFHX2Q9C0A1 2572 aaPredicted RBP10.82□□□□□ -0.68
COL12A1-205ENST00000425443 CD33P20138 364 aa10.82□□□□□ -0.68
COL12A1-205ENST00000425443 COL8A2P25067 703 aa10.82□□□□□ -0.68
COL12A1-205ENST00000425443 ZNF83P51522 516 aa10.82□□□□□ -0.68
COL12A1-205ENST00000425443 SLC35E4Q6ICL7 350 aa10.82□□□□□ -0.68
COL12A1-205ENST00000425443 Q6ZR03 302 aa10.82□□□□□ -0.68
COL12A1-205ENST00000425443 BHLHA15Q7RTS1 189 aaPredicted RBP10.82□□□□□ -0.68
COL12A1-205ENST00000425443 C1orf162Q8NEQ5 155 aaPredicted RBP10.82□□□□□ -0.68
COL12A1-205ENST00000425443 OR13D1Q8NGV5 346 aa10.82□□□□□ -0.68
COL12A1-205ENST00000425443 DVL1O14640 695 aa10.82□□□□□ -0.68
COL12A1-205ENST00000425443 CLEC3BP05452 202 aa10.82□□□□□ -0.68
COL12A1-205ENST00000425443 EGR1P18146 543 aa10.82□□□□□ -0.68
COL12A1-205ENST00000425443 COX5AP20674 150 aa10.82□□□□□ -0.68
COL12A1-205ENST00000425443 CEACAM3P40198 252 aa10.82□□□□□ -0.68
COL12A1-205ENST00000425443 TFF3Q07654 80 aa10.82□□□□□ -0.68
COL12A1-205ENST00000425443 P2RY6Q15077 328 aa10.82□□□□□ -0.68
COL12A1-205ENST00000425443 TPTE2P1Q5T6R2 138 aa10.82□□□□□ -0.68
COL12A1-205ENST00000425443 SDSLQ96GA7 329 aa10.82□□□□□ -0.68
COL12A1-205ENST00000425443 TMEM242Q9NWH2 141 aa10.82□□□□□ -0.68
COL12A1-205ENST00000425443 ACACAQ13085 2346 aa10.81□□□□□ -0.68
COL12A1-205ENST00000425443 ARFGEF3Q5TH69 2177 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms