RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 RCVRNP35243 200 aa15.85■□□□□ 0.13
PKNOX1-202ENST00000418336 TMBIM6P55061 237 aa15.85■□□□□ 0.13
PKNOX1-202ENST00000418336 AADACL3Q5VUY0 350 aa15.85■□□□□ 0.13
PKNOX1-202ENST00000418336 OR4A47Q6IF82 309 aa15.85■□□□□ 0.13
PKNOX1-202ENST00000418336 MZT2AQ6P582 158 aa15.85■□□□□ 0.13
PKNOX1-202ENST00000418336 C19orf35Q6ZS72 473 aa15.85■□□□□ 0.13
PKNOX1-202ENST00000418336 BCL7BQ9BQE9 202 aa15.85■□□□□ 0.13
PKNOX1-202ENST00000418336 BET1LQ9NYM9 111 aa15.85■□□□□ 0.13
PKNOX1-202ENST00000418336 EXTL2Q9UBQ6 330 aa15.85■□□□□ 0.13
PKNOX1-202ENST00000418336 KLK11Q9UBX7 282 aa15.85■□□□□ 0.13
PKNOX1-202ENST00000418336 TRAV3A0A0B4J244 114 aa15.84■□□□□ 0.13
PKNOX1-202ENST00000418336 HSPB1P04792 205 aaKnown RBP15.84■□□□□ 0.13
PKNOX1-202ENST00000418336 OR9G9P0C7N8 305 aa15.84■□□□□ 0.13
PKNOX1-202ENST00000418336 RPL5P46777 297 aaKnown RBP15.84■□□□□ 0.13
PKNOX1-202ENST00000418336 HERV-K104P61576 105 aa15.84■□□□□ 0.13
PKNOX1-202ENST00000418336 ZNF585BQ52M93 769 aa15.84■□□□□ 0.13
PKNOX1-202ENST00000418336 VAX1Q5SQQ9 334 aa15.84■□□□□ 0.13
PKNOX1-202ENST00000418336 C9orf66Q5T8R8 295 aa15.84■□□□□ 0.13
PKNOX1-202ENST00000418336 ZNF343Q6P1L6 599 aa15.84■□□□□ 0.13
PKNOX1-202ENST00000418336 LAX1Q8IWV1 398 aa15.84■□□□□ 0.13
PKNOX1-202ENST00000418336 OR51H1Q8NH63 302 aa15.84■□□□□ 0.13
PKNOX1-202ENST00000418336 OR52I2Q8NH67 350 aa15.84■□□□□ 0.13
PKNOX1-202ENST00000418336 RAB2BQ8WUD1 216 aa15.84■□□□□ 0.13
PKNOX1-202ENST00000418336 HMX3A6NHT5 357 aa15.83■□□□□ 0.12
PKNOX1-202ENST00000418336 FAM25AB3EWG3 89 aa15.83■□□□□ 0.12
PKNOX1-202ENST00000418336 FAM25CB3EWG5 89 aa15.83■□□□□ 0.12
PKNOX1-202ENST00000418336 FAM25GB3EWG6 89 aa15.83■□□□□ 0.12
PKNOX1-202ENST00000418336 S1PR2O95136 353 aa15.83■□□□□ 0.12
PKNOX1-202ENST00000418336 HPRT1P00492 218 aa15.83■□□□□ 0.12
PKNOX1-202ENST00000418336 TRBV12-3P01733 135 aa15.83■□□□□ 0.12
PKNOX1-202ENST00000418336 PRH1P02810 166 aa15.83■□□□□ 0.12
PKNOX1-202ENST00000418336 TAS2R31P59538 309 aa15.83■□□□□ 0.12
PKNOX1-202ENST00000418336 SSX9Q7RTT3 188 aa15.83■□□□□ 0.12
PKNOX1-202ENST00000418336 VSTM2AQ8TAG5 236 aa15.83■□□□□ 0.12
PKNOX1-202ENST00000418336 RSRP1Q9BUV0 290 aa15.83■□□□□ 0.12
PKNOX1-202ENST00000418336 PLEKHA2Q9HB19 425 aa15.83■□□□□ 0.12
PKNOX1-202ENST00000418336 CCDC59Q9P031 241 aaKnown RBP15.83■□□□□ 0.12
PKNOX1-202ENST00000418336 MTFP1Q9UDX5 166 aa15.83■□□□□ 0.12
PKNOX1-202ENST00000418336 H3BMQ9 156 aa15.82■□□□□ 0.12
PKNOX1-202ENST00000418336 OVOL1O14753 267 aa15.82■□□□□ 0.12
PKNOX1-202ENST00000418336 CREBL2O60519 120 aaPredicted RBP15.82■□□□□ 0.12
PKNOX1-202ENST00000418336 HRASP01112 189 aa15.82■□□□□ 0.12
PKNOX1-202ENST00000418336 RLN1P04808 185 aa15.82■□□□□ 0.12
PKNOX1-202ENST00000418336 MAS1LP35410 378 aa15.82■□□□□ 0.12
PKNOX1-202ENST00000418336 CATR1Q13166 79 aa15.82■□□□□ 0.12
PKNOX1-202ENST00000418336 ACSM6Q6P461 480 aa15.82■□□□□ 0.12
PKNOX1-202ENST00000418336 LHFPL1Q86WI0 220 aa15.82■□□□□ 0.12
PKNOX1-202ENST00000418336 OR6F1Q8NGZ6 308 aa15.82■□□□□ 0.12
PKNOX1-202ENST00000418336 OR4A5Q8NH83 315 aa15.82■□□□□ 0.12
PKNOX1-202ENST00000418336 PHB2Q99623 299 aa15.82■□□□□ 0.12
PKNOX1-202ENST00000418336 AKIP1Q9NQ31 210 aa15.82■□□□□ 0.12
PKNOX1-202ENST00000418336 ZNF355PQ9NSJ1 428 aa15.82■□□□□ 0.12
PKNOX1-202ENST00000418336 COA4Q9NYJ1 87 aa15.82■□□□□ 0.12
PKNOX1-202ENST00000418336 DMRT1Q9Y5R6 373 aa15.82■□□□□ 0.12
PKNOX1-202ENST00000418336 COL7A1Q02388 2944 aa15.82■□□□□ 0.12
PKNOX1-202ENST00000418336 GPR31O00270 319 aa15.81■□□□□ 0.12
PKNOX1-202ENST00000418336 CRYGCP07315 174 aa15.81■□□□□ 0.12
PKNOX1-202ENST00000418336 FGF2P09038 288 aa15.81■□□□□ 0.12
PKNOX1-202ENST00000418336 NQO2P16083 231 aa15.81■□□□□ 0.12
PKNOX1-202ENST00000418336 CD40LGP29965 261 aa15.81■□□□□ 0.12
PKNOX1-202ENST00000418336 RPL27AP46776 148 aaKnown RBP15.81■□□□□ 0.12
PKNOX1-202ENST00000418336 UCP3P55916 312 aa15.81■□□□□ 0.12
PKNOX1-202ENST00000418336 RPL8P62917 257 aaKnown RBP15.81■□□□□ 0.12
PKNOX1-202ENST00000418336 DGCR2P98153 550 aa15.81■□□□□ 0.12
PKNOX1-202ENST00000418336 RNASE12Q5GAN4 147 aaKnown RBP15.81■□□□□ 0.12
PKNOX1-202ENST00000418336 HUWE1Q7Z6Z7 4374 aaKnown RBP15.81■□□□□ 0.12
PKNOX1-202ENST00000418336 DPF1Q92782 380 aa15.81■□□□□ 0.12
PKNOX1-202ENST00000418336 ISOC1Q96CN7 298 aa15.81■□□□□ 0.12
PKNOX1-202ENST00000418336 SPIN2AQ99865 258 aa15.81■□□□□ 0.12
PKNOX1-202ENST00000418336 SPIN2BQ9BPZ2 258 aa15.81■□□□□ 0.12
PKNOX1-202ENST00000418336 SLIRPQ9GZT3 109 aaKnown RBP15.81■□□□□ 0.12
PKNOX1-202ENST00000418336 SLC2A9Q9NRM0 540 aa15.81■□□□□ 0.12
PKNOX1-202ENST00000418336 CEPT1Q9Y6K0 416 aa15.81■□□□□ 0.12
PKNOX1-202ENST00000418336 A0A0G2JLM5 398 aa15.8■□□□□ 0.12
PKNOX1-202ENST00000418336 NPIPB5A8MRT5 1133 aa15.8■□□□□ 0.12
PKNOX1-202ENST00000418336 M0QYG6 137 aa15.8■□□□□ 0.12
PKNOX1-202ENST00000418336 UPK2O00526 184 aa15.8■□□□□ 0.12
PKNOX1-202ENST00000418336 CD74P04233 296 aa15.8■□□□□ 0.12
PKNOX1-202ENST00000418336 CD3DP04234 171 aa15.8■□□□□ 0.12
PKNOX1-202ENST00000418336 AREGP15514 252 aa15.8■□□□□ 0.12
PKNOX1-202ENST00000418336 HLA-GP17693 338 aa15.8■□□□□ 0.12
PKNOX1-202ENST00000418336 F2RP25116 425 aa15.8■□□□□ 0.12
PKNOX1-202ENST00000418336 OR2B8PP59922 312 aa15.8■□□□□ 0.12
PKNOX1-202ENST00000418336 KLF5Q13887 457 aaPredicted RBP15.8■□□□□ 0.12
PKNOX1-202ENST00000418336 IL34Q6ZMJ4 242 aa15.8■□□□□ 0.12
PKNOX1-202ENST00000418336 OR4D10Q8NGI6 311 aa15.8■□□□□ 0.12
PKNOX1-202ENST00000418336 FCAMRQ8WWV6 532 aa15.8■□□□□ 0.12
PKNOX1-202ENST00000418336 MRGPRFQ96AM1 343 aa15.8■□□□□ 0.12
PKNOX1-202ENST00000418336 USMG5Q96IX5 58 aa15.8■□□□□ 0.12
PKNOX1-202ENST00000418336 FANCD2OSQ96PS1 177 aa15.8■□□□□ 0.12
PKNOX1-202ENST00000418336 COMMD9Q9P000 198 aa15.8■□□□□ 0.12
PKNOX1-202ENST00000418336 C13orf42A0A1B0GVH6 325 aa15.79■□□□□ 0.12
PKNOX1-202ENST00000418336 CTRB1P17538 263 aa15.79■□□□□ 0.12
PKNOX1-202ENST00000418336 INSL3P51460 131 aa15.79■□□□□ 0.12
PKNOX1-202ENST00000418336 CTRB2Q6GPI1 263 aa15.79■□□□□ 0.12
PKNOX1-202ENST00000418336 CADM3Q8N126 398 aa15.79■□□□□ 0.12
PKNOX1-202ENST00000418336 CD300LFQ8TDQ1 290 aa15.79■□□□□ 0.12
PKNOX1-202ENST00000418336 BORCS5Q969J3 196 aa15.79■□□□□ 0.12
PKNOX1-202ENST00000418336 DGCR14Q96DF8 476 aaKnown RBP15.79■□□□□ 0.12
PKNOX1-202ENST00000418336 NXF2Q9GZY0 626 aaKnown RBP15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms