RNA–Protein interactions for RNA: ENST00000418212.5

BDNF-208, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,125 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-208ENST00000418212 TCF19Q9Y242 345 aa11.21□□□□□ -0.61
BDNF-208ENST00000418212 HELZP42694 1942 aaKnown RBP11.21□□□□□ -0.62
BDNF-208ENST00000418212 BSPH1Q075Z2 132 aa11.21□□□□□ -0.62
BDNF-208ENST00000418212 CLEC2AQ6UVW9 174 aa11.21□□□□□ -0.62
BDNF-208ENST00000418212 GCSAMQ8N6F7 178 aa11.21□□□□□ -0.62
BDNF-208ENST00000418212 RAB24Q969Q5 203 aa11.21□□□□□ -0.62
BDNF-208ENST00000418212 DIRC2Q96SL1 478 aa11.21□□□□□ -0.62
BDNF-208ENST00000418212 TMEM208Q9BTX3 173 aa11.21□□□□□ -0.62
BDNF-208ENST00000418212 HIVEP3Q5T1R4 2406 aa11.21□□□□□ -0.62
BDNF-208ENST00000418212 COLCA2A8K830 154 aa11.2□□□□□ -0.62
BDNF-208ENST00000418212 F5H697 171 aa11.2□□□□□ -0.62
BDNF-208ENST00000418212 EGR1P18146 543 aa11.2□□□□□ -0.62
BDNF-208ENST00000418212 CDX1P47902 265 aaPredicted RBP11.2□□□□□ -0.62
BDNF-208ENST00000418212 TPPP2P59282 170 aa11.2□□□□□ -0.62
BDNF-208ENST00000418212 Q0VFX4 171 aa11.2□□□□□ -0.62
BDNF-208ENST00000418212 ABLIM2Q6H8Q1 611 aa11.2□□□□□ -0.62
BDNF-208ENST00000418212 FA2HQ7L5A8 372 aa11.2□□□□□ -0.62
BDNF-208ENST00000418212 RNF144BQ7Z419 303 aa11.2□□□□□ -0.62
BDNF-208ENST00000418212 FAM131CQ96AQ9 280 aa11.2□□□□□ -0.62
BDNF-208ENST00000418212 AQP10Q96PS8 301 aa11.2□□□□□ -0.62
BDNF-208ENST00000418212 WDR61Q9GZS3 305 aaKnown RBP11.2□□□□□ -0.62
BDNF-208ENST00000418212 GP6Q9HCN6 339 aa11.2□□□□□ -0.62
BDNF-208ENST00000418212 MANBALQ9NQG1 85 aa11.2□□□□□ -0.62
BDNF-208ENST00000418212 SPRR3Q9UBC9 169 aa11.2□□□□□ -0.62
BDNF-208ENST00000418212 RAXQ9Y2V3 346 aa11.2□□□□□ -0.62
BDNF-208ENST00000418212 YLPM1P49750 1951 aaKnown RBP11.2□□□□□ -0.62
BDNF-208ENST00000418212 IGLV3-32A0A0A0MS00 114 aa11.2□□□□□ -0.62
BDNF-208ENST00000418212 M0R143 59 aa11.2□□□□□ -0.62
BDNF-208ENST00000418212 ZNF253O75346 499 aa11.2□□□□□ -0.62
BDNF-208ENST00000418212 BCL2P10415 239 aa11.2□□□□□ -0.62
BDNF-208ENST00000418212 IDI2-AS1Q9NZ38 188 aa11.2□□□□□ -0.62
BDNF-208ENST00000418212 IGKV1D-8A0A087WSZ0 117 aa11.2□□□□□ -0.62
BDNF-208ENST00000418212 TRAV14DV4A0A0A6YYC5 116 aa11.2□□□□□ -0.62
BDNF-208ENST00000418212 HSPE1P61604 102 aaKnown RBP11.2□□□□□ -0.62
BDNF-208ENST00000418212 ZCCHC14Q8WYQ9 949 aaKnown RBP11.2□□□□□ -0.62
BDNF-208ENST00000418212 FUT9Q9Y231 359 aa11.2□□□□□ -0.62
BDNF-208ENST00000418212 WASHC3Q9Y3C0 194 aa11.2□□□□□ -0.62
BDNF-208ENST00000418212 MYLKQ15746 1914 aa11.2□□□□□ -0.62
BDNF-208ENST00000418212 TCF21O43680 179 aa11.2□□□□□ -0.62
BDNF-208ENST00000418212 CCDC144NLQ6NUI1 221 aa11.2□□□□□ -0.62
BDNF-208ENST00000418212 ACP7Q6ZNF0 438 aa11.2□□□□□ -0.62
BDNF-208ENST00000418212 WDR31Q8NA23 367 aa11.2□□□□□ -0.62
BDNF-208ENST00000418212 SGMS2Q8NHU3 365 aa11.2□□□□□ -0.62
BDNF-208ENST00000418212 GTF3AQ92664 365 aaKnown RBP11.2□□□□□ -0.62
BDNF-208ENST00000418212 STARD4Q96DR4 205 aa11.2□□□□□ -0.62
BDNF-208ENST00000418212 LYRM2Q9NU23 88 aaPredicted RBP11.2□□□□□ -0.62
BDNF-208ENST00000418212 RABAC1Q9UI14 185 aa11.2□□□□□ -0.62
BDNF-208ENST00000418212 CLDN16Q9Y5I7 305 aa11.2□□□□□ -0.62
BDNF-208ENST00000418212 TRAV34A0A0B4J273 112 aa11.19□□□□□ -0.62
BDNF-208ENST00000418212 SMIM17P0DL12 118 aa11.19□□□□□ -0.62
BDNF-208ENST00000418212 KHDC3LQ587J8 217 aa11.19□□□□□ -0.62
BDNF-208ENST00000418212 GGNQ86UU5 652 aa11.19□□□□□ -0.62
BDNF-208ENST00000418212 H1FOOQ8IZA3 346 aaPredicted RBP11.19□□□□□ -0.62
BDNF-208ENST00000418212 PNKDQ8N490 385 aa11.19□□□□□ -0.62
BDNF-208ENST00000418212 POC1AQ8NBT0 407 aa11.19□□□□□ -0.62
BDNF-208ENST00000418212 PRSS3P2Q8NHM4 247 aa11.19□□□□□ -0.62
BDNF-208ENST00000418212 MS4A10Q96PG2 267 aa11.19□□□□□ -0.62
BDNF-208ENST00000418212 TM2D1Q9BX74 207 aa11.19□□□□□ -0.62
BDNF-208ENST00000418212 LYNX1G3V0Z9 82 aa11.19□□□□□ -0.62
BDNF-208ENST00000418212 ORM1P02763 201 aa11.19□□□□□ -0.62
BDNF-208ENST00000418212 CLPSP04118 112 aa11.19□□□□□ -0.62
BDNF-208ENST00000418212 LYNX1P0DP58 116 aa11.19□□□□□ -0.62
BDNF-208ENST00000418212 MC5RP33032 325 aa11.19□□□□□ -0.62
BDNF-208ENST00000418212 ATP5J2P56134 94 aa11.19□□□□□ -0.62
BDNF-208ENST00000418212 ANAPC1Q9H1A4 1944 aa11.19□□□□□ -0.62
BDNF-208ENST00000418212 SRSF10O75494 262 aaKnown RBP11.19□□□□□ -0.62
BDNF-208ENST00000418212 WISP1O95388 367 aa11.19□□□□□ -0.62
BDNF-208ENST00000418212 MEF2BQ02080 365 aaPredicted RBP11.19□□□□□ -0.62
BDNF-208ENST00000418212 PEAR1Q5VY43 1037 aaPredicted RBP11.19□□□□□ -0.62
BDNF-208ENST00000418212 OR2D3Q8NGH3 330 aa11.19□□□□□ -0.62
BDNF-208ENST00000418212 FAM122AQ96E09 287 aa11.19□□□□□ -0.62
BDNF-208ENST00000418212 RARRES2Q99969 163 aa11.19□□□□□ -0.62
BDNF-208ENST00000418212 RPRMQ9NS64 109 aa11.19□□□□□ -0.62
BDNF-208ENST00000418212 CHD8Q9HCK8 2581 aa11.18□□□□□ -0.62
BDNF-208ENST00000418212 IGKV1D-13A0A0B4J2D9 117 aa11.18□□□□□ -0.62
BDNF-208ENST00000418212 C17orf98A8MV24 154 aa11.18□□□□□ -0.62
BDNF-208ENST00000418212 IGHV2-70P01814 119 aa11.18□□□□□ -0.62
BDNF-208ENST00000418212 IGKV1-13P0DP09 117 aa11.18□□□□□ -0.62
BDNF-208ENST00000418212 ADCYAP1P18509 176 aa11.18□□□□□ -0.62
BDNF-208ENST00000418212 BMPERQ8N8U9 685 aa11.18□□□□□ -0.62
BDNF-208ENST00000418212 RTBDNQ9BSG5 229 aaPredicted RBP11.18□□□□□ -0.62
BDNF-208ENST00000418212 UFC1Q9Y3C8 167 aa11.18□□□□□ -0.62
BDNF-208ENST00000418212 NAV2Q8IVL1 2488 aa11.18□□□□□ -0.62
BDNF-208ENST00000418212 SPTBN4Q9H254 2564 aa11.18□□□□□ -0.62
BDNF-208ENST00000418212 IGHV3OR16-13A0A075B7E8 117 aa11.18□□□□□ -0.62
BDNF-208ENST00000418212 IGHV3-74A0A0B4J1X5 117 aa11.18□□□□□ -0.62
BDNF-208ENST00000418212 CXorf1O96002 111 aa11.18□□□□□ -0.62
BDNF-208ENST00000418212 SELLP14151 372 aa11.18□□□□□ -0.62
BDNF-208ENST00000418212 CRISP2P16562 243 aa11.18□□□□□ -0.62
BDNF-208ENST00000418212 IER3P46695 156 aa11.18□□□□□ -0.62
BDNF-208ENST00000418212 ZNF137PP52743 207 aa11.18□□□□□ -0.62
BDNF-208ENST00000418212 PLAURQ03405 335 aa11.18□□□□□ -0.62
BDNF-208ENST00000418212 KLRB1Q12918 225 aa11.18□□□□□ -0.62
BDNF-208ENST00000418212 P2RX4Q99571 388 aa11.18□□□□□ -0.62
BDNF-208ENST00000418212 JPT1Q9UK76 154 aa11.18□□□□□ -0.62
BDNF-208ENST00000418212 IGKV1-12A0A0C4DH73 117 aa11.18□□□□□ -0.62
BDNF-208ENST00000418212 HYPMO75409 117 aa11.18□□□□□ -0.62
BDNF-208ENST00000418212 KBTBD11O94819 623 aa11.18□□□□□ -0.62
BDNF-208ENST00000418212 IGKV1D-12P01611 117 aa11.18□□□□□ -0.62
BDNF-208ENST00000418212 PF4V1P10720 104 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms