RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 SLC35E3Q7Z769 313 aa11.89□□□□□ -0.51
SGCE-202ENST00000415788 OR13A1Q8NGR1 328 aa11.89□□□□□ -0.51
SGCE-202ENST00000415788 MRGPRDQ8TDS7 321 aa11.89□□□□□ -0.51
SGCE-202ENST00000415788 TVP23CQ96ET8 276 aa11.89□□□□□ -0.51
SGCE-202ENST00000415788 KCNIP1Q9NZI2 227 aa11.89□□□□□ -0.51
SGCE-202ENST00000415788 C17orf98A8MV24 154 aa11.88□□□□□ -0.51
SGCE-202ENST00000415788 HSD17B6O14756 317 aa11.88□□□□□ -0.51
SGCE-202ENST00000415788 PPP1R2P9O14990 202 aa11.88□□□□□ -0.51
SGCE-202ENST00000415788 DIRAS3O95661 229 aa11.88□□□□□ -0.51
SGCE-202ENST00000415788 CDS2O95674 445 aa11.88□□□□□ -0.51
SGCE-202ENST00000415788 HBE1P02100 147 aa11.88□□□□□ -0.51
SGCE-202ENST00000415788 ARF6P62330 175 aa11.88□□□□□ -0.51
SGCE-202ENST00000415788 SRSF7Q16629 238 aaKnown RBP eCLIP11.88□□□□□ -0.51
SGCE-202ENST00000415788 ZNF506Q5JVG8 444 aa11.88□□□□□ -0.51
SGCE-202ENST00000415788 ZNF880Q6PDB4 577 aa11.88□□□□□ -0.51
SGCE-202ENST00000415788 DPPA3Q6W0C5 159 aa11.88□□□□□ -0.51
SGCE-202ENST00000415788 LYZL2Q7Z4W2 148 aa11.88□□□□□ -0.51
SGCE-202ENST00000415788 TEX29Q8N6K0 151 aa11.88□□□□□ -0.51
SGCE-202ENST00000415788 OR4D5Q8NGN0 318 aa11.88□□□□□ -0.51
SGCE-202ENST00000415788 OR2G3Q8NGZ4 309 aa11.88□□□□□ -0.51
SGCE-202ENST00000415788 RBMXL1Q96E39 390 aaKnown RBP11.88□□□□□ -0.51
SGCE-202ENST00000415788 SLC25A31Q9H0C2 315 aa11.88□□□□□ -0.51
SGCE-202ENST00000415788 C7orf69Q9H7B7 122 aa11.88□□□□□ -0.51
SGCE-202ENST00000415788 LINC00574Q9H8X3 128 aa11.88□□□□□ -0.51
SGCE-202ENST00000415788 KBTBD11-OT1A0A1B0GTJ5 212 aa11.87□□□□□ -0.51
SGCE-202ENST00000415788 CGB3P0DN86 165 aa11.87□□□□□ -0.51
SGCE-202ENST00000415788 CGB7P0DN87 165 aa11.87□□□□□ -0.51
SGCE-202ENST00000415788 CCL3L1P16619 93 aa11.87□□□□□ -0.51
SGCE-202ENST00000415788 DLX6P56179 175 aa11.87□□□□□ -0.51
SGCE-202ENST00000415788 NHLH2Q02577 135 aa11.87□□□□□ -0.51
SGCE-202ENST00000415788 SPSB3Q6PJ21 355 aa11.87□□□□□ -0.51
SGCE-202ENST00000415788 OR2C3Q8N628 320 aa11.87□□□□□ -0.51
SGCE-202ENST00000415788 OR10A7Q8NGE5 316 aa11.87□□□□□ -0.51
SGCE-202ENST00000415788 OR10G4Q8NGN3 311 aa11.87□□□□□ -0.51
SGCE-202ENST00000415788 GNPNAT1Q96EK6 184 aaPredicted RBP11.87□□□□□ -0.51
SGCE-202ENST00000415788 CYYR1Q96J86 154 aa11.87□□□□□ -0.51
SGCE-202ENST00000415788 SPIN2AQ99865 258 aa11.87□□□□□ -0.51
SGCE-202ENST00000415788 RARRES2Q99969 163 aa11.87□□□□□ -0.51
SGCE-202ENST00000415788 SPIN2BQ9BPZ2 258 aa11.87□□□□□ -0.51
SGCE-202ENST00000415788 HDHD3Q9BSH5 251 aaPredicted RBP11.87□□□□□ -0.51
SGCE-202ENST00000415788 SLC2A9Q9NRM0 540 aa11.87□□□□□ -0.51
SGCE-202ENST00000415788 ITPR3Q14573 2671 aa11.87□□□□□ -0.51
SGCE-202ENST00000415788 TOX4O94842 621 aa11.87□□□□□ -0.51
SGCE-202ENST00000415788 RND3P61587 244 aa11.87□□□□□ -0.51
SGCE-202ENST00000415788 PKIAP61925 76 aa11.87□□□□□ -0.51
SGCE-202ENST00000415788 TMEM30BQ3MIR4 351 aa11.87□□□□□ -0.51
SGCE-202ENST00000415788 Q3ZCU0 254 aa11.87□□□□□ -0.51
SGCE-202ENST00000415788 REC114Q7Z4M0 266 aa11.87□□□□□ -0.51
SGCE-202ENST00000415788 ZNF429Q86V71 674 aa11.87□□□□□ -0.51
SGCE-202ENST00000415788 OR52M1Q8NGK5 317 aa11.87□□□□□ -0.51
SGCE-202ENST00000415788 Q8WTZ3 238 aa11.87□□□□□ -0.51
SGCE-202ENST00000415788 TOMM40LQ969M1 308 aa11.87□□□□□ -0.51
SGCE-202ENST00000415788 NIPSNAP3BQ9BS92 247 aa11.87□□□□□ -0.51
SGCE-202ENST00000415788 SIRPDQ9H106 197 aa11.87□□□□□ -0.51
SGCE-202ENST00000415788 PRDM13Q9H4Q3 707 aa11.87□□□□□ -0.51
SGCE-202ENST00000415788 C11orf1Q9H5F2 150 aa11.87□□□□□ -0.51
SGCE-202ENST00000415788 Q9N2K0 584 aa11.87□□□□□ -0.51
SGCE-202ENST00000415788 CALYQ9NYX4 217 aa11.87□□□□□ -0.51
SGCE-202ENST00000415788 MMP24Q9Y5R2 645 aa11.87□□□□□ -0.51
SGCE-202ENST00000415788 MED13LQ71F56 2210 aa11.87□□□□□ -0.51
SGCE-202ENST00000415788 NPIPB11E5RHQ5 1161 aa11.86□□□□□ -0.51
SGCE-202ENST00000415788 SPINT2O43291 252 aa11.86□□□□□ -0.51
SGCE-202ENST00000415788 HIST1H2BKO60814 126 aa11.86□□□□□ -0.51
SGCE-202ENST00000415788 SCAF4O95104 1147 aaKnown RBP11.86□□□□□ -0.51
SGCE-202ENST00000415788 LY6G6DO95868 133 aa11.86□□□□□ -0.51
SGCE-202ENST00000415788 HIST1H2BJP06899 126 aa11.86□□□□□ -0.51
SGCE-202ENST00000415788 MMP9P14780 707 aa11.86□□□□□ -0.51
SGCE-202ENST00000415788 HIST1H2BOP23527 126 aa11.86□□□□□ -0.51
SGCE-202ENST00000415788 ATP6V0CP27449 155 aa11.86□□□□□ -0.51
SGCE-202ENST00000415788 HIST1H2BBP33778 126 aa11.86□□□□□ -0.51
SGCE-202ENST00000415788 KIR2DS4P43632 304 aa11.86□□□□□ -0.51
SGCE-202ENST00000415788 HIST1H2BDP58876 126 aa11.86□□□□□ -0.51
SGCE-202ENST00000415788 ERVFRD-1P60508 538 aa11.86□□□□□ -0.51
SGCE-202ENST00000415788 HIST1H2BCP62807 126 aa11.86□□□□□ -0.51
SGCE-202ENST00000415788 DLK1P80370 383 aa11.86□□□□□ -0.51
SGCE-202ENST00000415788 KIR2DS1Q14954 304 aa11.86□□□□□ -0.51
SGCE-202ENST00000415788 HIST2H2BEQ16778 126 aa11.86□□□□□ -0.51
SGCE-202ENST00000415788 C17orf58Q2M2W7 97 aa11.86□□□□□ -0.51
SGCE-202ENST00000415788 SP6Q3SY56 376 aa11.86□□□□□ -0.51
SGCE-202ENST00000415788 LBHQ53QV2 105 aaPredicted RBP11.86□□□□□ -0.51
SGCE-202ENST00000415788 KHDC3LQ587J8 217 aa11.86□□□□□ -0.51
SGCE-202ENST00000415788 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.86□□□□□ -0.51
SGCE-202ENST00000415788 Q6ZS49 121 aa11.86□□□□□ -0.51
SGCE-202ENST00000415788 HIST3H2BBQ8N257 126 aa11.86□□□□□ -0.51
SGCE-202ENST00000415788 C11orf42Q8N5U0 333 aa11.86□□□□□ -0.51
SGCE-202ENST00000415788 OR10D4PQ8NGN7 298 aa11.86□□□□□ -0.51
SGCE-202ENST00000415788 RNASE11Q8TAA1 199 aaKnown RBP11.86□□□□□ -0.51
SGCE-202ENST00000415788 HIST1H2BHQ93079 126 aa11.86□□□□□ -0.51
SGCE-202ENST00000415788 MOB3AQ96BX8 217 aa11.86□□□□□ -0.51
SGCE-202ENST00000415788 HIST1H2BNQ99877 126 aa11.86□□□□□ -0.51
SGCE-202ENST00000415788 HIST1H2BMQ99879 126 aa11.86□□□□□ -0.51
SGCE-202ENST00000415788 TMEM160Q9NX00 188 aa11.86□□□□□ -0.51
SGCE-202ENST00000415788 DOCK11Q5JSL3 2073 aa11.85□□□□□ -0.51
SGCE-202ENST00000415788 YLPM1P49750 1951 aaKnown RBP11.85□□□□□ -0.51
SGCE-202ENST00000415788 TRAV39A0A0B4J263 110 aa11.85□□□□□ -0.51
SGCE-202ENST00000415788 C12orf77C9JDV5 145 aa11.85□□□□□ -0.51
SGCE-202ENST00000415788 TSTD3H0UI37 97 aa11.85□□□□□ -0.51
SGCE-202ENST00000415788 C15orf65H3BRN8 121 aa11.85□□□□□ -0.51
SGCE-202ENST00000415788 PRTN3P24158 256 aa11.85□□□□□ -0.51
SGCE-202ENST00000415788 SSTR5P35346 364 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms