RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 TOGARAM1Q9Y4F4 1720 aa15.77■□□□□ 0.12
SHANK3-202ENST00000414786 EDIL3O43854 480 aa15.77■□□□□ 0.12
SHANK3-202ENST00000414786 LHBP01229 141 aa15.77■□□□□ 0.12
SHANK3-202ENST00000414786 APOBEC3AP31941 199 aaPredicted RBP15.77■□□□□ 0.12
SHANK3-202ENST00000414786 LINC00158P58513 81 aa15.77■□□□□ 0.12
SHANK3-202ENST00000414786 C3orf56Q8N813 242 aa15.77■□□□□ 0.12
SHANK3-202ENST00000414786 GATD1Q8NB37 220 aa15.77■□□□□ 0.12
SHANK3-202ENST00000414786 COX14Q96I36 57 aa15.77■□□□□ 0.12
SHANK3-202ENST00000414786 SEC16AO15027 2179 aa15.77■□□□□ 0.12
SHANK3-202ENST00000414786 FAM169BQ8N8A8 192 aa15.77■□□□□ 0.12
SHANK3-202ENST00000414786 PEMTQ9UBM1 199 aa15.77■□□□□ 0.12
SHANK3-202ENST00000414786 PEX7O00628 323 aa15.77■□□□□ 0.11
SHANK3-202ENST00000414786 ZNF625Q96I27 306 aaPredicted RBP15.77■□□□□ 0.11
SHANK3-202ENST00000414786 PRSS53Q2L4Q9 553 aa15.77■□□□□ 0.11
SHANK3-202ENST00000414786 LEMD1Q68G75 181 aa15.77■□□□□ 0.11
SHANK3-202ENST00000414786 OR11H7Q8NGC8 314 aa15.77■□□□□ 0.11
SHANK3-202ENST00000414786 A0A1W2PQM1 296 aa15.77■□□□□ 0.11
SHANK3-202ENST00000414786 LILRA6Q6PI73 481 aa15.77■□□□□ 0.11
SHANK3-202ENST00000414786 OR10AG1Q8NH19 301 aa15.77■□□□□ 0.11
SHANK3-202ENST00000414786 ELF5Q9UKW6 265 aaPredicted RBP15.77■□□□□ 0.11
SHANK3-202ENST00000414786 C5P01031 1676 aa15.76■□□□□ 0.11
SHANK3-202ENST00000414786 KLF4O43474 513 aa15.76■□□□□ 0.11
SHANK3-202ENST00000414786 VENTXO95231 258 aa15.76■□□□□ 0.11
SHANK3-202ENST00000414786 RPL32P62910 135 aaKnown RBP15.76■□□□□ 0.11
SHANK3-202ENST00000414786 TRAV30A0A087WSZ9 112 aa15.76■□□□□ 0.11
SHANK3-202ENST00000414786 Q5PR19 223 aa15.76■□□□□ 0.11
SHANK3-202ENST00000414786 CELA3AP09093 270 aa15.76■□□□□ 0.11
SHANK3-202ENST00000414786 HOXA5P20719 270 aa15.76■□□□□ 0.11
SHANK3-202ENST00000414786 P2RY6Q15077 328 aa15.76■□□□□ 0.11
SHANK3-202ENST00000414786 LRTM2Q8N967 370 aa15.76■□□□□ 0.11
SHANK3-202ENST00000414786 H3BRM9 83 aa15.76■□□□□ 0.11
SHANK3-202ENST00000414786 PGLYRP1O75594 196 aaPredicted RBP15.76■□□□□ 0.11
SHANK3-202ENST00000414786 FGF12P61328 243 aa15.76■□□□□ 0.11
SHANK3-202ENST00000414786 LIMS2Q7Z4I7 341 aa15.76■□□□□ 0.11
SHANK3-202ENST00000414786 AKAP6Q13023 2319 aa15.76■□□□□ 0.11
SHANK3-202ENST00000414786 UBE2V2Q15819 145 aa15.76■□□□□ 0.11
SHANK3-202ENST00000414786 FAM74A3Q4VXF1 159 aa15.76■□□□□ 0.11
SHANK3-202ENST00000414786 GPR146Q96CH1 333 aa15.76■□□□□ 0.11
SHANK3-202ENST00000414786 ZNF48Q96MX3 618 aaPredicted RBP15.76■□□□□ 0.11
SHANK3-202ENST00000414786 APCDD1LQ8NCL9 501 aa15.75■□□□□ 0.11
SHANK3-202ENST00000414786 TRAV2A0A0B4J234 112 aa15.75■□□□□ 0.11
SHANK3-202ENST00000414786 A0A1W2PQD3 144 aa15.75■□□□□ 0.11
SHANK3-202ENST00000414786 SMIM13P0DJ93 91 aa15.75■□□□□ 0.11
SHANK3-202ENST00000414786 PAX2Q02962 417 aa15.75■□□□□ 0.11
SHANK3-202ENST00000414786 OR9G1Q8NH87 305 aa15.75■□□□□ 0.11
SHANK3-202ENST00000414786 CLDND2Q8NHS1 167 aa15.75■□□□□ 0.11
SHANK3-202ENST00000414786 SDF2L1Q9HCN8 221 aa15.75■□□□□ 0.11
SHANK3-202ENST00000414786 DLL3Q9NYJ7 618 aa15.75■□□□□ 0.11
SHANK3-202ENST00000414786 CXorf65A6NEN9 183 aa15.75■□□□□ 0.11
SHANK3-202ENST00000414786 LINC00299Q6ZSB3 139 aa15.75■□□□□ 0.11
SHANK3-202ENST00000414786 TMEM219Q86XT9 240 aa15.75■□□□□ 0.11
SHANK3-202ENST00000414786 CTSBP07858 339 aa15.75■□□□□ 0.11
SHANK3-202ENST00000414786 MRAPQ8TCY5 172 aa15.75■□□□□ 0.11
SHANK3-202ENST00000414786 DNM1P46Q6ZS02 220 aa15.74■□□□□ 0.11
SHANK3-202ENST00000414786 ZNF501Q96CX3 271 aaPredicted RBP15.74■□□□□ 0.11
SHANK3-202ENST00000414786 KCNE5Q9UJ90 142 aa15.74■□□□□ 0.11
SHANK3-202ENST00000414786 MARCH11A6NNE9 402 aa15.74■□□□□ 0.11
SHANK3-202ENST00000414786 SEC11BP0C7V7 166 aa15.74■□□□□ 0.11
SHANK3-202ENST00000414786 LINC00614P0C842 121 aa15.74■□□□□ 0.11
SHANK3-202ENST00000414786 GATA2P23769 480 aaPredicted RBP15.74■□□□□ 0.11
SHANK3-202ENST00000414786 CRIM1Q9NZV1 1036 aa15.74■□□□□ 0.11
SHANK3-202ENST00000414786 ADARB2-AS1A8MUL3 147 aa15.74■□□□□ 0.11
SHANK3-202ENST00000414786 ANXA2RQ3ZCQ2 193 aa15.74■□□□□ 0.11
SHANK3-202ENST00000414786 TEX45Q8NA69 505 aa15.74■□□□□ 0.11
SHANK3-202ENST00000414786 NOVP48745 357 aa15.74■□□□□ 0.11
SHANK3-202ENST00000414786 MRPL20Q9BYC9 149 aaKnown RBP15.74■□□□□ 0.11
SHANK3-202ENST00000414786 CDC42EP3Q9UKI2 254 aa15.74■□□□□ 0.11
SHANK3-202ENST00000414786 KCNK7Q9Y2U2 307 aa15.74■□□□□ 0.11
SHANK3-202ENST00000414786 FOXS1O43638 330 aa15.74■□□□□ 0.11
SHANK3-202ENST00000414786 TMEM167AQ8TBQ9 72 aa15.74■□□□□ 0.11
SHANK3-202ENST00000414786 C14orf144Q96I85 54 aa15.74■□□□□ 0.11
SHANK3-202ENST00000414786 PKIAP61925 76 aa15.73■□□□□ 0.11
SHANK3-202ENST00000414786 ARPC1AQ92747 370 aa15.73■□□□□ 0.11
SHANK3-202ENST00000414786 WDR54Q9H977 334 aa15.73■□□□□ 0.11
SHANK3-202ENST00000414786 BCL2P10415 239 aa15.73■□□□□ 0.11
SHANK3-202ENST00000414786 SLC25A45Q8N413 288 aa15.73■□□□□ 0.11
SHANK3-202ENST00000414786 ZNF703Q9H7S9 590 aaPredicted RBP15.73■□□□□ 0.11
SHANK3-202ENST00000414786 TRAV40A0A0B4J280 105 aa15.73■□□□□ 0.11
SHANK3-202ENST00000414786 ASAH2BP0C7U1 165 aa15.73■□□□□ 0.11
SHANK3-202ENST00000414786 LBHQ53QV2 105 aaPredicted RBP15.73■□□□□ 0.11
SHANK3-202ENST00000414786 DMKNQ6E0U4 476 aaPredicted RBP15.73■□□□□ 0.11
SHANK3-202ENST00000414786 OR13A1Q8NGR1 328 aa15.73■□□□□ 0.11
SHANK3-202ENST00000414786 FAM216BQ8N7L0 139 aa15.73■□□□□ 0.11
SHANK3-202ENST00000414786 UBE2E2Q96LR5 201 aa15.73■□□□□ 0.11
SHANK3-202ENST00000414786 CACNA1GO43497 2377 aa15.73■□□□□ 0.11
SHANK3-202ENST00000414786 B9A039 149 aa15.73■□□□□ 0.11
SHANK3-202ENST00000414786 M0QZK8 103 aa15.73■□□□□ 0.11
SHANK3-202ENST00000414786 CKS1BP61024 79 aa15.73■□□□□ 0.11
SHANK3-202ENST00000414786 C8orf88P0DMB2 117 aa15.72■□□□□ 0.11
SHANK3-202ENST00000414786 PPP1R32Q7Z5V6 425 aa15.72■□□□□ 0.11
SHANK3-202ENST00000414786 PMCHL2Q9BQD1 86 aa15.72■□□□□ 0.11
SHANK3-202ENST00000414786 H7C1H1 209 aa15.72■□□□□ 0.11
SHANK3-202ENST00000414786 MEF2CQ06413 473 aaPredicted RBP15.72■□□□□ 0.11
SHANK3-202ENST00000414786 SUMO4Q6EEV6 95 aa15.72■□□□□ 0.11
SHANK3-202ENST00000414786 MAPK1IP1LQ8NDC0 245 aa15.72■□□□□ 0.11
SHANK3-202ENST00000414786 MESP2Q0VG99 397 aa15.72■□□□□ 0.11
SHANK3-202ENST00000414786 CHD5Q8TDI0 1954 aa15.72■□□□□ 0.11
SHANK3-202ENST00000414786 RPS20P60866 119 aaKnown RBP15.72■□□□□ 0.11
SHANK3-202ENST00000414786 FAM74A7A6NL05 159 aa15.72■□□□□ 0.11
SHANK3-202ENST00000414786 HIST1H4AP62805 103 aaKnown RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms