RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 NXPH1P58417 271 aa11.74□□□□□ -0.53
CLTCL1-201ENST00000412649 LOXL4Q96JB6 756 aa11.74□□□□□ -0.53
CLTCL1-201ENST00000412649 FBXL7Q9UJT9 491 aa11.74□□□□□ -0.53
CLTCL1-201ENST00000412649 IGHV1-69-2A0A0G2JMI3 117 aa11.74□□□□□ -0.53
CLTCL1-201ENST00000412649 HYAL1Q12794 435 aa11.74□□□□□ -0.53
CLTCL1-201ENST00000412649 BLNKQ8WV28 456 aa11.74□□□□□ -0.53
CLTCL1-201ENST00000412649 R4GN57 208 aa11.74□□□□□ -0.53
CLTCL1-201ENST00000412649 IGHV1OR15-9A0A0B4J2B8 117 aa11.73□□□□□ -0.53
CLTCL1-201ENST00000412649 NEURL1O76050 574 aa11.73□□□□□ -0.53
CLTCL1-201ENST00000412649 CGAP01215 116 aa11.73□□□□□ -0.53
CLTCL1-201ENST00000412649 HLA-DRB1P01911 266 aa11.73□□□□□ -0.53
CLTCL1-201ENST00000412649 CT45A10P0DMU9 189 aa11.73□□□□□ -0.53
CLTCL1-201ENST00000412649 OR1L4Q8NGR5 311 aa11.73□□□□□ -0.53
CLTCL1-201ENST00000412649 NABP1Q96AH0 204 aa11.73□□□□□ -0.53
CLTCL1-201ENST00000412649 RNASE7Q9H1E1 156 aaKnown RBP11.73□□□□□ -0.53
CLTCL1-201ENST00000412649 CLEC1BQ9P126 229 aa11.73□□□□□ -0.53
CLTCL1-201ENST00000412649 SDK2Q58EX2 2172 aa11.73□□□□□ -0.53
CLTCL1-201ENST00000412649 ESPL1Q14674 2120 aa11.73□□□□□ -0.53
CLTCL1-201ENST00000412649 CCL7P80098 99 aa11.73□□□□□ -0.53
CLTCL1-201ENST00000412649 ABHD12Q8N2K0 398 aa11.73□□□□□ -0.53
CLTCL1-201ENST00000412649 VWCEQ96DN2 955 aa11.73□□□□□ -0.53
CLTCL1-201ENST00000412649 STRADBQ9C0K7 418 aa11.73□□□□□ -0.53
CLTCL1-201ENST00000412649 CHD3Q12873 2000 aaKnown RBP11.73□□□□□ -0.53
CLTCL1-201ENST00000412649 PDPNQ86YL7 162 aa11.73□□□□□ -0.53
CLTCL1-201ENST00000412649 STPG4Q8N801 248 aa11.73□□□□□ -0.53
CLTCL1-201ENST00000412649 MRPS16Q9Y3D3 137 aaKnown RBP11.73□□□□□ -0.53
CLTCL1-201ENST00000412649 NUP210Q8TEM1 1887 aaPredicted RBP11.73□□□□□ -0.53
CLTCL1-201ENST00000412649 TMPRSS2O15393 492 aa11.72□□□□□ -0.53
CLTCL1-201ENST00000412649 IGLC2P0DOY2 106 aa11.72□□□□□ -0.53
CLTCL1-201ENST00000412649 IGLC3P0DOY3 106 aa11.72□□□□□ -0.53
CLTCL1-201ENST00000412649 Q0VG73 95 aa11.72□□□□□ -0.53
CLTCL1-201ENST00000412649 TUSC5Q8IXB3 177 aa11.72□□□□□ -0.53
CLTCL1-201ENST00000412649 WDR83OSQ9Y284 106 aa11.72□□□□□ -0.53
CLTCL1-201ENST00000412649 ADH4P08319 380 aa11.72□□□□□ -0.53
CLTCL1-201ENST00000412649 KRTCAP3Q53RY4 240 aa11.72□□□□□ -0.53
CLTCL1-201ENST00000412649 DHRS13Q6UX07 377 aa11.72□□□□□ -0.53
CLTCL1-201ENST00000412649 ASCL4Q6XD76 172 aa11.72□□□□□ -0.53
CLTCL1-201ENST00000412649 Q6ZS49 121 aa11.72□□□□□ -0.53
CLTCL1-201ENST00000412649 C17orf98A8MV24 154 aa11.72□□□□□ -0.53
CLTCL1-201ENST00000412649 YPEL3P61236 119 aaPredicted RBP11.72□□□□□ -0.53
CLTCL1-201ENST00000412649 LCN12Q6JVE5 192 aa11.72□□□□□ -0.53
CLTCL1-201ENST00000412649 LINC00696Q6ZRV3 163 aa11.72□□□□□ -0.53
CLTCL1-201ENST00000412649 MEGF9Q9H1U4 602 aa11.72□□□□□ -0.53
CLTCL1-201ENST00000412649 A8MWL6 223 aa11.72□□□□□ -0.53
CLTCL1-201ENST00000412649 LYG1Q8N1E2 194 aa11.72□□□□□ -0.53
CLTCL1-201ENST00000412649 MS4A5Q9H3V2 200 aa11.72□□□□□ -0.53
CLTCL1-201ENST00000412649 TPTE2P1Q5T6R2 138 aa11.71□□□□□ -0.53
CLTCL1-201ENST00000412649 AMMECR1LQ6DCA0 310 aa11.71□□□□□ -0.53
CLTCL1-201ENST00000412649 MRPS18CQ9Y3D5 142 aaKnown RBP11.71□□□□□ -0.53
CLTCL1-201ENST00000412649 GOLGB1Q14789 3259 aaKnown RBP11.71□□□□□ -0.53
CLTCL1-201ENST00000412649 FBLL1A6NHQ2 334 aaKnown RBP11.71□□□□□ -0.53
CLTCL1-201ENST00000412649 CELA2AP08217 269 aa11.71□□□□□ -0.53
CLTCL1-201ENST00000412649 C1QTNF5Q9BXJ0 243 aa11.71□□□□□ -0.53
CLTCL1-201ENST00000412649 HES4Q9HCC6 221 aa11.71□□□□□ -0.53
CLTCL1-201ENST00000412649 OSTCQ9NRP0 149 aa11.71□□□□□ -0.53
CLTCL1-201ENST00000412649 ZNF355PQ9NSJ1 428 aa11.71□□□□□ -0.53
CLTCL1-201ENST00000412649 EP400Q96L91 3159 aa11.71□□□□□ -0.53
CLTCL1-201ENST00000412649 IZUMO1RA6ND01 250 aa11.71□□□□□ -0.54
CLTCL1-201ENST00000412649 RRHO14718 337 aa11.71□□□□□ -0.54
CLTCL1-201ENST00000412649 FABP2P12104 132 aa11.71□□□□□ -0.54
CLTCL1-201ENST00000412649 RIPPLY3P57055 190 aa11.71□□□□□ -0.54
CLTCL1-201ENST00000412649 OR8A1Q8NGG7 326 aa11.71□□□□□ -0.54
CLTCL1-201ENST00000412649 MYO7BQ6PIF6 2116 aa11.71□□□□□ -0.54
CLTCL1-201ENST00000412649 MRPS11P82912 194 aaKnown RBP11.71□□□□□ -0.54
CLTCL1-201ENST00000412649 GUSBP11Q6P575 273 aa11.71□□□□□ -0.54
CLTCL1-201ENST00000412649 TPRX1Q8N7U7 411 aa11.71□□□□□ -0.54
CLTCL1-201ENST00000412649 RAB37Q96AX2 223 aa11.71□□□□□ -0.54
CLTCL1-201ENST00000412649 ADTRPQ96IZ2 230 aa11.71□□□□□ -0.54
CLTCL1-201ENST00000412649 DEPPQ9NTK1 212 aa11.71□□□□□ -0.54
CLTCL1-201ENST00000412649 IGKV1D-33P01593 117 aa11.7□□□□□ -0.54
CLTCL1-201ENST00000412649 IGKV1-33P01594 117 aa11.7□□□□□ -0.54
CLTCL1-201ENST00000412649 CDKN1BP46527 198 aa11.7□□□□□ -0.54
CLTCL1-201ENST00000412649 TMEM42Q69YG0 159 aa11.7□□□□□ -0.54
CLTCL1-201ENST00000412649 PMCHL2Q9BQD1 86 aa11.7□□□□□ -0.54
CLTCL1-201ENST00000412649 REPIN1Q9BWE0 567 aaKnown RBP11.7□□□□□ -0.54
CLTCL1-201ENST00000412649 ZNF430Q9H8G1 570 aaPredicted RBP11.7□□□□□ -0.54
CLTCL1-201ENST00000412649 IGLV3-32A0A0A0MS00 114 aa11.7□□□□□ -0.54
CLTCL1-201ENST00000412649 RAMP3O60896 148 aa11.7□□□□□ -0.54
CLTCL1-201ENST00000412649 FOXA3P55318 350 aaPredicted RBP11.7□□□□□ -0.54
CLTCL1-201ENST00000412649 PCSK4Q6UW60 755 aa11.7□□□□□ -0.54
CLTCL1-201ENST00000412649 NABP2Q9BQ15 211 aa11.7□□□□□ -0.54
CLTCL1-201ENST00000412649 LRRK1Q38SD2 2015 aa11.7□□□□□ -0.54
CLTCL1-201ENST00000412649 A0A1W2PN81 502 aa11.7□□□□□ -0.54
CLTCL1-201ENST00000412649 COL8A1P27658 744 aa11.7□□□□□ -0.54
CLTCL1-201ENST00000412649 RPL15P61313 204 aaKnown RBP11.7□□□□□ -0.54
CLTCL1-201ENST00000412649 DCAF12Q5T6F0 453 aa11.7□□□□□ -0.54
CLTCL1-201ENST00000412649 NFAM1Q8NET5 270 aaPredicted RBP11.7□□□□□ -0.54
CLTCL1-201ENST00000412649 TCF19Q9Y242 345 aa11.7□□□□□ -0.54
CLTCL1-201ENST00000412649 CORTO00230 105 aa11.69□□□□□ -0.54
CLTCL1-201ENST00000412649 STAG3L2P0CL84 134 aa11.69□□□□□ -0.54
CLTCL1-201ENST00000412649 STAG3L3P0CL85 134 aa11.69□□□□□ -0.54
CLTCL1-201ENST00000412649 FADS6Q8N9I5 356 aa11.69□□□□□ -0.54
CLTCL1-201ENST00000412649 SCCPDHQ8NBX0 429 aa11.69□□□□□ -0.54
CLTCL1-201ENST00000412649 PAXXQ9BUH6 204 aa11.69□□□□□ -0.54
CLTCL1-201ENST00000412649 COL25A1Q9BXS0 654 aaPredicted RBP11.69□□□□□ -0.54
CLTCL1-201ENST00000412649 AMMECR1Q9Y4X0 333 aaPredicted RBP11.69□□□□□ -0.54
CLTCL1-201ENST00000412649 ZNF891A8MT65 544 aaPredicted RBP11.69□□□□□ -0.54
CLTCL1-201ENST00000412649 LIPFP07098 398 aa11.69□□□□□ -0.54
CLTCL1-201ENST00000412649 LGALS4P56470 323 aa11.69□□□□□ -0.54
CLTCL1-201ENST00000412649 PRSS8Q16651 343 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms