RNA–Protein interactions for RNA: ENST00000411146.1

RNU2-55P-201, Transcript of RNA, U2 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU2-55P, Length 174 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-55P-201ENST00000411146 ZNF137PP52743 207 aa-0.81□□□□□ -2.54
RNU2-55P-201ENST00000411146 CAVIN4Q5BKX8 364 aa-0.81□□□□□ -2.54
RNU2-55P-201ENST00000411146 ACBD4Q8NC06 268 aa-0.81□□□□□ -2.54
RNU2-55P-201ENST00000411146 DYNC2LI1Q8TCX1 351 aa-0.81□□□□□ -2.54
RNU2-55P-201ENST00000411146 RGCCQ9H4X1 137 aa-0.81□□□□□ -2.54
RNU2-55P-201ENST00000411146 RPRD1BQ9NQG5 326 aaKnown RBP-0.81□□□□□ -2.54
RNU2-55P-201ENST00000411146 CDC42SE1Q9NRR8 79 aa-0.81□□□□□ -2.54
RNU2-55P-201ENST00000411146 SNX24Q9Y343 169 aa-0.81□□□□□ -2.54
RNU2-55P-201ENST00000411146 NPATQ14207 1427 aa-0.81□□□□□ -2.54
RNU2-55P-201ENST00000411146 A0A1W2PPV4 95 aa-0.82□□□□□ -2.54
RNU2-55P-201ENST00000411146 OR6C6A6NF89 314 aa-0.82□□□□□ -2.54
RNU2-55P-201ENST00000411146 GOLGA6L10A6NI86 522 aa-0.82□□□□□ -2.54
RNU2-55P-201ENST00000411146 C9JCJ5 164 aa-0.82□□□□□ -2.54
RNU2-55P-201ENST00000411146 FABP7O15540 132 aa-0.82□□□□□ -2.54
RNU2-55P-201ENST00000411146 KDELR3O43731 214 aa-0.82□□□□□ -2.54
RNU2-55P-201ENST00000411146 SNAI1O95863 264 aaPredicted RBP-0.82□□□□□ -2.54
RNU2-55P-201ENST00000411146 MBP02144 154 aa-0.82□□□□□ -2.54
RNU2-55P-201ENST00000411146 MSNP26038 577 aaKnown RBP-0.82□□□□□ -2.54
RNU2-55P-201ENST00000411146 FKBP2P26885 142 aaKnown RBP-0.82□□□□□ -2.54
RNU2-55P-201ENST00000411146 UBE2KP61086 200 aa-0.82□□□□□ -2.54
RNU2-55P-201ENST00000411146 AP1S1P61966 158 aa-0.82□□□□□ -2.54
RNU2-55P-201ENST00000411146 SUPT4H1P63272 117 aaKnown RBP-0.82□□□□□ -2.54
RNU2-55P-201ENST00000411146 AKR1C1Q04828 323 aa-0.82□□□□□ -2.54
RNU2-55P-201ENST00000411146 BSXQ3C1V8 233 aa-0.82□□□□□ -2.54
RNU2-55P-201ENST00000411146 LCN8Q6JVE9 175 aa-0.82□□□□□ -2.54
RNU2-55P-201ENST00000411146 TTC33Q6PID6 262 aaPredicted RBP-0.82□□□□□ -2.54
RNU2-55P-201ENST00000411146 RASSF6Q6ZTQ3 369 aa-0.82□□□□□ -2.54
RNU2-55P-201ENST00000411146 CPNE2Q96FN4 548 aaPredicted RBP-0.82□□□□□ -2.54
RNU2-55P-201ENST00000411146 TLNRD1Q9H1K6 362 aa-0.82□□□□□ -2.54
RNU2-55P-201ENST00000411146 CHRAC1Q9NRG0 131 aa-0.82□□□□□ -2.54
RNU2-55P-201ENST00000411146 PLXNA4Q9HCM2 1894 aa-0.82□□□□□ -2.54
RNU2-55P-201ENST00000411146 NUP160Q12769 1436 aa-0.82□□□□□ -2.54
RNU2-55P-201ENST00000411146 CLDN25C9JDP6 229 aa-0.83□□□□□ -2.54
RNU2-55P-201ENST00000411146 SLC22A1O15245 554 aa-0.83□□□□□ -2.54
RNU2-55P-201ENST00000411146 CYTH3O43739 400 aa-0.83□□□□□ -2.54
RNU2-55P-201ENST00000411146 ARL6IP5O75915 188 aa-0.83□□□□□ -2.54
RNU2-55P-201ENST00000411146 DNAL4O96015 105 aa-0.83□□□□□ -2.54
RNU2-55P-201ENST00000411146 CRYGCP07315 174 aa-0.83□□□□□ -2.54
RNU2-55P-201ENST00000411146 MSMBP08118 114 aa-0.83□□□□□ -2.54
RNU2-55P-201ENST00000411146 HLA-DMBP28068 263 aa-0.83□□□□□ -2.54
RNU2-55P-201ENST00000411146 DEKP35659 375 aaKnown RBP-0.83□□□□□ -2.54
RNU2-55P-201ENST00000411146 TMEM33P57088 247 aa-0.83□□□□□ -2.54
RNU2-55P-201ENST00000411146 PSG9Q00887 426 aa-0.83□□□□□ -2.54
RNU2-55P-201ENST00000411146 KRTAP26-1Q6PEX3 210 aa-0.83□□□□□ -2.54
RNU2-55P-201ENST00000411146 PID1Q7Z2X4 250 aa-0.83□□□□□ -2.54
RNU2-55P-201ENST00000411146 LINC00523Q86TU6 105 aa-0.83□□□□□ -2.54
RNU2-55P-201ENST00000411146 GKN2Q86XP6 184 aa-0.83□□□□□ -2.54
RNU2-55P-201ENST00000411146 LINC00311Q8N616 119 aa-0.83□□□□□ -2.54
RNU2-55P-201ENST00000411146 NATD1Q8N6N6 113 aa-0.83□□□□□ -2.54
RNU2-55P-201ENST00000411146 ZNF676Q8N7Q3 588 aa-0.83□□□□□ -2.54
RNU2-55P-201ENST00000411146 GPATCH11Q8N954 259 aa-0.83□□□□□ -2.54
RNU2-55P-201ENST00000411146 CDRT4Q8N9R6 151 aa-0.83□□□□□ -2.54
RNU2-55P-201ENST00000411146 OR2Y1Q8NGV0 311 aa-0.83□□□□□ -2.54
RNU2-55P-201ENST00000411146 LGALS14Q8TCE9 139 aa-0.83□□□□□ -2.54
RNU2-55P-201ENST00000411146 RAB2BQ8WUD1 216 aa-0.83□□□□□ -2.54
RNU2-55P-201ENST00000411146 CATSPER2Q96P56 530 aa-0.83□□□□□ -2.54
RNU2-55P-201ENST00000411146 SLC50A1Q9BRV3 221 aa-0.83□□□□□ -2.54
RNU2-55P-201ENST00000411146 EMC3Q9P0I2 261 aa-0.83□□□□□ -2.54
RNU2-55P-201ENST00000411146 NXT1Q9UKK6 140 aaKnown RBP-0.83□□□□□ -2.54
RNU2-55P-201ENST00000411146 TNXBP22105 4242 aa-0.83□□□□□ -2.54
RNU2-55P-201ENST00000411146 ZGRF1Q86YA3 2104 aa-0.83□□□□□ -2.54
RNU2-55P-201ENST00000411146 TMED7-TICAM2A0A0A6YYA0 188 aa-0.84□□□□□ -2.54
RNU2-55P-201ENST00000411146 C21orf140B9A014 251 aa-0.84□□□□□ -2.54
RNU2-55P-201ENST00000411146 LEPROTO15243 131 aa-0.84□□□□□ -2.54
RNU2-55P-201ENST00000411146 OR1I1O60431 355 aa-0.84□□□□□ -2.54
RNU2-55P-201ENST00000411146 HBZP02008 142 aa-0.84□□□□□ -2.54
RNU2-55P-201ENST00000411146 STAG3L3P0CL85 134 aa-0.84□□□□□ -2.54
RNU2-55P-201ENST00000411146 BGNP21810 368 aa-0.84□□□□□ -2.54
RNU2-55P-201ENST00000411146 SPINT3P49223 89 aa-0.84□□□□□ -2.54
RNU2-55P-201ENST00000411146 BTN3A2P78410 334 aa-0.84□□□□□ -2.54
RNU2-55P-201ENST00000411146 PDE6HQ13956 83 aa-0.84□□□□□ -2.54
RNU2-55P-201ENST00000411146 TMCO2Q7Z6W1 182 aaPredicted RBP-0.84□□□□□ -2.54
RNU2-55P-201ENST00000411146 ZNF321PQ8N8H1 164 aa-0.84□□□□□ -2.54
RNU2-55P-201ENST00000411146 Q8WTZ3 238 aa-0.84□□□□□ -2.54
RNU2-55P-201ENST00000411146 C12orf43Q96C57 262 aaKnown RBP-0.84□□□□□ -2.54
RNU2-55P-201ENST00000411146 GAL3ST2Q9H3Q3 398 aa-0.84□□□□□ -2.54
RNU2-55P-201ENST00000411146 ZNHIT6Q9NWK9 470 aaKnown RBP-0.84□□□□□ -2.54
RNU2-55P-201ENST00000411146 MTUS2Q5JR59 1369 aa-0.84□□□□□ -2.54
RNU2-55P-201ENST00000411146 FREM3P0C091 2139 aa-0.85□□□□□ -2.54
RNU2-55P-201ENST00000411146 TRAV1-1A0A0B4J248 108 aa-0.85□□□□□ -2.55
RNU2-55P-201ENST00000411146 CCL25O15444 150 aa-0.85□□□□□ -2.55
RNU2-55P-201ENST00000411146 KLF7O75840 302 aaPredicted RBP-0.85□□□□□ -2.55
RNU2-55P-201ENST00000411146 HLA-DQB2P05538 268 aa-0.85□□□□□ -2.55
RNU2-55P-201ENST00000411146 RPL30P62888 115 aaKnown RBP-0.85□□□□□ -2.55
RNU2-55P-201ENST00000411146 FKBP1AP62942 108 aaKnown RBP-0.85□□□□□ -2.55
RNU2-55P-201ENST00000411146 KISS1Q15726 138 aa-0.85□□□□□ -2.55
RNU2-55P-201ENST00000411146 NDUFA5Q16718 116 aa-0.85□□□□□ -2.55
RNU2-55P-201ENST00000411146 MPV17LQ2QL34 196 aa-0.85□□□□□ -2.55
RNU2-55P-201ENST00000411146 SOSTDC1Q6X4U4 206 aa-0.85□□□□□ -2.55
RNU2-55P-201ENST00000411146 AHSA2Q719I0 299 aa-0.85□□□□□ -2.55
RNU2-55P-201ENST00000411146 OR7D2Q96RA2 312 aa-0.85□□□□□ -2.55
RNU2-55P-201ENST00000411146 CD300AQ9UGN4 299 aa-0.85□□□□□ -2.55
RNU2-55P-201ENST00000411146 KIF27Q86VH2 1401 aa-0.86□□□□□ -2.55
RNU2-55P-201ENST00000411146 K7ERQ8 282 aa-0.86□□□□□ -2.55
RNU2-55P-201ENST00000411146 CRXO43186 299 aaPredicted RBP-0.86□□□□□ -2.55
RNU2-55P-201ENST00000411146 ATP5G1P05496 136 aa-0.86□□□□□ -2.55
RNU2-55P-201ENST00000411146 SFTPCP11686 197 aa-0.86□□□□□ -2.55
RNU2-55P-201ENST00000411146 SLCO1A2P46721 670 aa-0.86□□□□□ -2.55
RNU2-55P-201ENST00000411146 EIF2B2P49770 351 aaKnown RBP-0.86□□□□□ -2.55
RNU2-55P-201ENST00000411146 LPCAT4Q643R3 524 aa-0.86□□□□□ -2.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms