RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 FANCD2OSQ96PS1 177 aa1.71□□□□□ -2.14
RNU4-53P-201ENST00000410828 OR2A7Q96R45 310 aa1.71□□□□□ -2.14
RNU4-53P-201ENST00000410828 SLC29A1Q99808 456 aa1.71□□□□□ -2.14
RNU4-53P-201ENST00000410828 UQCC2Q9BRT2 126 aa1.71□□□□□ -2.14
RNU4-53P-201ENST00000410828 DCUN1D5Q9BTE7 237 aa1.71□□□□□ -2.14
RNU4-53P-201ENST00000410828 CHRDL1Q9BU40 450 aa1.71□□□□□ -2.14
RNU4-53P-201ENST00000410828 C20orf24Q9BUV8 137 aa1.71□□□□□ -2.14
RNU4-53P-201ENST00000410828 RHPN1-AS1Q9BWJ2 59 aa1.71□□□□□ -2.14
RNU4-53P-201ENST00000410828 TMEM59Q9BXS4 323 aa1.71□□□□□ -2.14
RNU4-53P-201ENST00000410828 ZNF436Q9C0F3 470 aaPredicted RBP1.71□□□□□ -2.14
RNU4-53P-201ENST00000410828 GABARAPL1Q9H0R8 117 aa1.71□□□□□ -2.14
RNU4-53P-201ENST00000410828 OR2D2Q9H210 308 aa1.71□□□□□ -2.14
RNU4-53P-201ENST00000410828 OR51E2Q9H255 320 aa1.71□□□□□ -2.14
RNU4-53P-201ENST00000410828 RNF167Q9H6Y7 350 aa1.71□□□□□ -2.14
RNU4-53P-201ENST00000410828 ZNF430Q9H8G1 570 aaPredicted RBP1.71□□□□□ -2.14
RNU4-53P-201ENST00000410828 Q9N2K0 584 aa1.71□□□□□ -2.14
RNU4-53P-201ENST00000410828 AMBNQ9NP70 447 aa1.71□□□□□ -2.14
RNU4-53P-201ENST00000410828 C12orf4Q9NQ89 552 aa1.71□□□□□ -2.14
RNU4-53P-201ENST00000410828 SDHAF2Q9NX18 166 aa1.71□□□□□ -2.14
RNU4-53P-201ENST00000410828 ERVK13-1Q9NX77 482 aa1.71□□□□□ -2.14
RNU4-53P-201ENST00000410828 BABAM2Q9NXR7 383 aa1.71□□□□□ -2.14
RNU4-53P-201ENST00000410828 SMPD3Q9NY59 655 aaPredicted RBP1.71□□□□□ -2.14
RNU4-53P-201ENST00000410828 KLK9Q9UKQ9 250 aa1.71□□□□□ -2.14
RNU4-53P-201ENST00000410828 ETV7Q9Y603 341 aa1.71□□□□□ -2.14
RNU4-53P-201ENST00000410828 DNAH5Q8TE73 4624 aa1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 IGKV3-7A0A075B6H7 116 aa1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 ELOA3CA0A087WX78 387 aaPredicted RBP1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 TRBV6-7A0A0A0MS04 114 aa1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 TRBV5-7A0A0A0MS05 114 aa1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 TRAV14DV4A0A0A6YYC5 116 aa1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 IGKV1-6A0A0C4DH72 117 aa1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 A0A1B0GW64 132 aa1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 A0A1W2PPK0 400 aa1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 ERICH4A6NGS2 130 aa1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 LINC00473A8K010 186 aa1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 ZNF705EA8MWA4 302 aaPredicted RBP1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 TEX22C9J3V5 150 aa1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 J3QL48 77 aa1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 DNASE2O00115 360 aaPredicted RBP1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 CHEK1O14757 476 aa1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 BET1O15155 118 aa1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 GYG2O15488 501 aa1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 OGG1O15527 345 aa1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 FABP7O15540 132 aa1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 CYB5BO43169 146 aa1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 TGOLN2O43493 480 aa1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 FCGR3BO75015 233 aa1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 KBTBD11O94819 623 aa1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 DIRAS3O95661 229 aa1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 BPNT1O95861 308 aa1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 HRASP01112 189 aa1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 CD3GP09693 182 aa1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 ZNF735P0CB33 412 aa1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 LIMS3P0CW19 117 aa1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 LIMS4P0CW20 117 aa1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 SPART-AS1P0CW21 52 aa1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 SPP1P10451 314 aa1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 FCGR1AP12314 374 aa1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 GNB3P16520 340 aa1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 CD36P16671 472 aa1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 MYL12AP19105 171 aa1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 CELP19835 753 aa1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 CRHBPP24387 322 aa1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 MAPK3P27361 379 aaPredicted RBP1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 DCKP27707 260 aa1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 DUTP33316 252 aaKnown RBP1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 GYS2P54840 703 aa1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 FAM3BP58499 235 aaPredicted RBP1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 DEFB131AP59861 70 aa1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 RPS11P62280 158 aaKnown RBP eCLIP1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 RPL8P62917 257 aaKnown RBP1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 MRPS15P82914 257 aaKnown RBP1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 RELQ04864 619 aaPredicted RBP1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 PLA2G7Q13093 441 aa1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 ARFRP1Q13795 201 aa1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 SSX1Q16384 188 aa1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 DNAL1Q4LDG9 190 aa1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 C1orf100Q5SVJ3 147 aa1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 TTC23Q5W5X9 447 aa1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 LEMD1Q68G75 181 aa1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 OR10K2Q6IF99 312 aa1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 MORN3Q6PF18 240 aaPredicted RBP1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 C19orf35Q6ZS72 473 aa1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 ZNF767PQ75MW2 155 aa1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 SPATA12Q7Z6I5 190 aa1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 AMIGO2Q86SJ2 522 aa1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 STHQ8IWL8 128 aa1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 VKORC1L1Q8N0U8 176 aa1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 C6orf223Q8N319 242 aa1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 GBGT1Q8N5D6 347 aa1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 TMEM116Q8NCL8 245 aa1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 OR52I1Q8NGK6 324 aa1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 OR6M1Q8NGM8 313 aa1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 OR4A4PQ8NGN8 299 aa1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 OR10J5Q8NHC4 309 aa1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 TMEM167AQ8TBQ9 72 aa1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 VN1R17PQ8TDU5 208 aa1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 GIMAP1Q8WWP7 306 aa1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 FRZBQ92765 325 aa1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 GGHQ92820 318 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms