RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 HSPE1P61604 102 aaKnown RBP11.15□□□□□ -0.62
LIMS1-205ENST00000410093 TMEM249Q2WGJ8 235 aa11.15□□□□□ -0.62
LIMS1-205ENST00000410093 ZNF833PQ6ZTB9 187 aa11.15□□□□□ -0.62
LIMS1-205ENST00000410093 DMRTC2Q8IXT2 367 aaPredicted RBP11.15□□□□□ -0.62
LIMS1-205ENST00000410093 OSR1Q8TAX0 266 aaPredicted RBP11.15□□□□□ -0.62
LIMS1-205ENST00000410093 RHOVQ96L33 236 aa11.15□□□□□ -0.62
LIMS1-205ENST00000410093 ACTR3CQ9C0K3 210 aaPredicted RBP11.15□□□□□ -0.62
LIMS1-205ENST00000410093 ENY2Q9NPA8 101 aa11.15□□□□□ -0.62
LIMS1-205ENST00000410093 HEYLQ9NQ87 328 aaPredicted RBP11.15□□□□□ -0.62
LIMS1-205ENST00000410093 TMEM14BQ9NUH8 114 aa11.15□□□□□ -0.62
LIMS1-205ENST00000410093 SLC39A9Q9NUM3 307 aa11.15□□□□□ -0.62
LIMS1-205ENST00000410093 PTPN13Q12923 2485 aa11.15□□□□□ -0.62
LIMS1-205ENST00000410093 A0A087X0M5 115 aa11.14□□□□□ -0.63
LIMS1-205ENST00000410093 LOC102723971A0A1B0GUV8 181 aa11.14□□□□□ -0.63
LIMS1-205ENST00000410093 A0A1B0GX30 115 aa11.14□□□□□ -0.63
LIMS1-205ENST00000410093 A0A1W2PPH5 198 aa11.14□□□□□ -0.63
LIMS1-205ENST00000410093 C15orf62A8K5M9 175 aa11.14□□□□□ -0.63
LIMS1-205ENST00000410093 B4DEV8 164 aa11.14□□□□□ -0.63
LIMS1-205ENST00000410093 SLC31A2O15432 143 aa11.14□□□□□ -0.63
LIMS1-205ENST00000410093 CYB5BO43169 146 aa11.14□□□□□ -0.63
LIMS1-205ENST00000410093 APOA2P02652 100 aa11.14□□□□□ -0.63
LIMS1-205ENST00000410093 SRP19P09132 144 aaKnown RBP11.14□□□□□ -0.63
LIMS1-205ENST00000410093 SELLP14151 372 aa11.14□□□□□ -0.63
LIMS1-205ENST00000410093 FGF7P21781 194 aa11.14□□□□□ -0.63
LIMS1-205ENST00000410093 VDAC2P45880 294 aaPredicted RBP11.14□□□□□ -0.63
LIMS1-205ENST00000410093 ICAM4Q14773 271 aa11.14□□□□□ -0.63
LIMS1-205ENST00000410093 HFEQ30201 348 aa11.14□□□□□ -0.63
LIMS1-205ENST00000410093 ACOT6Q3I5F7 207 aaPredicted RBP11.14□□□□□ -0.63
LIMS1-205ENST00000410093 RNF212Q495C1 297 aa11.14□□□□□ -0.63
LIMS1-205ENST00000410093 FAM122CQ6P4D5 195 aa11.14□□□□□ -0.63
LIMS1-205ENST00000410093 SLC35E3Q7Z769 313 aa11.14□□□□□ -0.63
LIMS1-205ENST00000410093 TNFRSF14Q92956 283 aa11.14□□□□□ -0.63
LIMS1-205ENST00000410093 TMEM186Q96B77 213 aa11.14□□□□□ -0.63
LIMS1-205ENST00000410093 NEIL1Q96FI4 390 aaPredicted RBP11.14□□□□□ -0.63
LIMS1-205ENST00000410093 RCC1LQ96I51 464 aaKnown RBP11.14□□□□□ -0.63
LIMS1-205ENST00000410093 VAX2Q9UIW0 290 aa11.14□□□□□ -0.63
LIMS1-205ENST00000410093 A0A087WWC5 75 aa11.14□□□□□ -0.63
LIMS1-205ENST00000410093 IGHV1-69-2A0A0G2JMI3 117 aa11.14□□□□□ -0.63
LIMS1-205ENST00000410093 CCL21O00585 134 aa11.14□□□□□ -0.63
LIMS1-205ENST00000410093 NUPL2O15504 423 aaKnown RBP11.14□□□□□ -0.63
LIMS1-205ENST00000410093 IFNA10P01566 189 aa11.14□□□□□ -0.63
LIMS1-205ENST00000410093 IL6RP08887 468 aaPredicted RBP11.14□□□□□ -0.63
LIMS1-205ENST00000410093 BCL2P10415 239 aa11.14□□□□□ -0.63
LIMS1-205ENST00000410093 FOLR2P14207 255 aa11.14□□□□□ -0.63
LIMS1-205ENST00000410093 CD1BP29016 333 aa11.14□□□□□ -0.63
LIMS1-205ENST00000410093 CCL20P78556 96 aa11.14□□□□□ -0.63
LIMS1-205ENST00000410093 PNRC1Q12796 327 aaPredicted RBP11.14□□□□□ -0.63
LIMS1-205ENST00000410093 ZNF383Q8NA42 475 aa11.14□□□□□ -0.63
LIMS1-205ENST00000410093 OR4A5Q8NH83 315 aa11.14□□□□□ -0.63
LIMS1-205ENST00000410093 CCL17Q92583 94 aa11.14□□□□□ -0.63
LIMS1-205ENST00000410093 ZDHHC16Q969W1 377 aa11.14□□□□□ -0.63
LIMS1-205ENST00000410093 PCGF1Q9BSM1 259 aa11.14□□□□□ -0.63
LIMS1-205ENST00000410093 NPCDR1Q9BY65 106 aa11.14□□□□□ -0.63
LIMS1-205ENST00000410093 MANBALQ9NQG1 85 aa11.14□□□□□ -0.63
LIMS1-205ENST00000410093 BET1LQ9NYM9 111 aa11.14□□□□□ -0.63
LIMS1-205ENST00000410093 TCF19Q9Y242 345 aa11.14□□□□□ -0.63
LIMS1-205ENST00000410093 PRELID1Q9Y255 219 aa11.14□□□□□ -0.63
LIMS1-205ENST00000410093 WDR83OSQ9Y284 106 aa11.14□□□□□ -0.63
LIMS1-205ENST00000410093 HIVEP3Q5T1R4 2406 aa11.13□□□□□ -0.63
LIMS1-205ENST00000410093 POLEQ07864 2286 aa11.13□□□□□ -0.63
LIMS1-205ENST00000410093 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.13□□□□□ -0.63
LIMS1-205ENST00000410093 C7orf77A4D0Y5 90 aa11.13□□□□□ -0.63
LIMS1-205ENST00000410093 MAP1LC3B2A6NCE7 125 aa11.13□□□□□ -0.63
LIMS1-205ENST00000410093 M0R036 132 aa11.13□□□□□ -0.63
LIMS1-205ENST00000410093 RBP4P02753 201 aa11.13□□□□□ -0.63
LIMS1-205ENST00000410093 RNF224P0DH78 156 aa11.13□□□□□ -0.63
LIMS1-205ENST00000410093 IL3RAP26951 378 aa11.13□□□□□ -0.63
LIMS1-205ENST00000410093 PPOXP50336 477 aa11.13□□□□□ -0.63
LIMS1-205ENST00000410093 ZNF137PP52743 207 aa11.13□□□□□ -0.63
LIMS1-205ENST00000410093 AWAT1Q58HT5 328 aa11.13□□□□□ -0.63
LIMS1-205ENST00000410093 OR4A47Q6IF82 309 aa11.13□□□□□ -0.63
LIMS1-205ENST00000410093 TMEM88Q6PEY1 159 aa11.13□□□□□ -0.63
LIMS1-205ENST00000410093 OR5B3Q8NH48 314 aa11.13□□□□□ -0.63
LIMS1-205ENST00000410093 VSTM2AQ8TAG5 236 aa11.13□□□□□ -0.63
LIMS1-205ENST00000410093 RAB1CQ92928 201 aa11.13□□□□□ -0.63
LIMS1-205ENST00000410093 NIPSNAP3BQ9BS92 247 aa11.13□□□□□ -0.63
LIMS1-205ENST00000410093 MAP1LC3BQ9GZQ8 125 aa11.13□□□□□ -0.63
LIMS1-205ENST00000410093 RPS10P5Q9NQ39 176 aa11.13□□□□□ -0.63
LIMS1-205ENST00000410093 SLC35D1Q9NTN3 355 aa11.13□□□□□ -0.63
LIMS1-205ENST00000410093 SPTBN1Q01082 2364 aaKnown RBP11.13□□□□□ -0.63
LIMS1-205ENST00000410093 DIDO1Q9BTC0 2240 aaKnown RBP11.12□□□□□ -0.63
LIMS1-205ENST00000410093 CXorf65A6NEN9 183 aa11.12□□□□□ -0.63
LIMS1-205ENST00000410093 F12P00748 615 aaPredicted RBP11.12□□□□□ -0.63
LIMS1-205ENST00000410093 MT-ND4LP03901 98 aa11.12□□□□□ -0.63
LIMS1-205ENST00000410093 CT45A6P0DMU7 189 aa11.12□□□□□ -0.63
LIMS1-205ENST00000410093 CT45A5P0DMU8 189 aa11.12□□□□□ -0.63
LIMS1-205ENST00000410093 CT45A7P0DMV0 189 aa11.12□□□□□ -0.63
LIMS1-205ENST00000410093 HOXA1P49639 335 aaPredicted RBP11.12□□□□□ -0.63
LIMS1-205ENST00000410093 RAB31Q13636 194 aa11.12□□□□□ -0.63
LIMS1-205ENST00000410093 HAGHQ16775 308 aa11.12□□□□□ -0.63
LIMS1-205ENST00000410093 TMEM200BQ69YZ2 307 aa11.12□□□□□ -0.63
LIMS1-205ENST00000410093 ETV3LQ6ZN32 361 aa11.12□□□□□ -0.63
LIMS1-205ENST00000410093 CBLN2Q8IUK8 224 aa11.12□□□□□ -0.63
LIMS1-205ENST00000410093 LHX4Q969G2 390 aa11.12□□□□□ -0.63
LIMS1-205ENST00000410093 TVP23CQ96ET8 276 aa11.12□□□□□ -0.63
LIMS1-205ENST00000410093 RARRES2Q99969 163 aa11.12□□□□□ -0.63
LIMS1-205ENST00000410093 SIRT7Q9NRC8 400 aa11.12□□□□□ -0.63
LIMS1-205ENST00000410093 USP9XQ93008 2570 aaPredicted RBP11.12□□□□□ -0.63
LIMS1-205ENST00000410093 ICE1Q9Y2F5 2266 aa11.12□□□□□ -0.63
LIMS1-205ENST00000410093 INS-IGF2F8WCM5 200 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms