RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 NECAP1Q8NC96 275 aa11.7□□□□□ -0.54
TPM1-207ENST00000403994 DIABLOQ9NR28 239 aa11.7□□□□□ -0.54
TPM1-207ENST00000403994 CCL28Q9NRJ3 127 aa11.7□□□□□ -0.54
TPM1-207ENST00000403994 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.69□□□□□ -0.54
TPM1-207ENST00000403994 MEIS3P1A6NDR6 274 aa11.69□□□□□ -0.54
TPM1-207ENST00000403994 NPIPB5A8MRT5 1133 aa11.69□□□□□ -0.54
TPM1-207ENST00000403994 E7EUB6 86 aa11.69□□□□□ -0.54
TPM1-207ENST00000403994 OR2J3O76001 311 aa11.69□□□□□ -0.54
TPM1-207ENST00000403994 ZNF735P0CB33 412 aa11.69□□□□□ -0.54
TPM1-207ENST00000403994 MAS1LP35410 378 aa11.69□□□□□ -0.54
TPM1-207ENST00000403994 CBX5P45973 191 aa11.69□□□□□ -0.54
TPM1-207ENST00000403994 FXYD4P59646 89 aa11.69□□□□□ -0.54
TPM1-207ENST00000403994 ATP5G2Q06055 141 aa11.69□□□□□ -0.54
TPM1-207ENST00000403994 UBE2NLQ5JXB2 153 aa11.69□□□□□ -0.54
TPM1-207ENST00000403994 SSX9Q7RTT3 188 aa11.69□□□□□ -0.54
TPM1-207ENST00000403994 SLC25A42Q86VD7 318 aa11.69□□□□□ -0.54
TPM1-207ENST00000403994 TMEM17Q86X19 198 aa11.69□□□□□ -0.54
TPM1-207ENST00000403994 YIPF6Q96EC8 236 aa11.69□□□□□ -0.54
TPM1-207ENST00000403994 THAP7Q9BT49 309 aaPredicted RBP11.69□□□□□ -0.54
TPM1-207ENST00000403994 SLC5A7Q9GZV3 580 aa11.69□□□□□ -0.54
TPM1-207ENST00000403994 SIGLEC8Q9NYZ4 499 aa11.69□□□□□ -0.54
TPM1-207ENST00000403994 TENM2Q9NT68 2774 aa11.69□□□□□ -0.54
TPM1-207ENST00000403994 STARD9Q9P2P6 4700 aa11.68□□□□□ -0.54
TPM1-207ENST00000403994 LYSTQ99698 3801 aa11.68□□□□□ -0.54
TPM1-207ENST00000403994 RBFOX2O43251 390 aaKnown RBP eCLIP11.68□□□□□ -0.54
TPM1-207ENST00000403994 XRCC3O43542 346 aa11.68□□□□□ -0.54
TPM1-207ENST00000403994 AIREO43918 545 aa11.68□□□□□ -0.54
TPM1-207ENST00000403994 HRASP01112 189 aa11.68□□□□□ -0.54
TPM1-207ENST00000403994 AREGP15514 252 aa11.68□□□□□ -0.54
TPM1-207ENST00000403994 RPL8P62917 257 aaKnown RBP11.68□□□□□ -0.54
TPM1-207ENST00000403994 OR4A47Q6IF82 309 aa11.68□□□□□ -0.54
TPM1-207ENST00000403994 LCN12Q6JVE5 192 aa11.68□□□□□ -0.54
TPM1-207ENST00000403994 ZNF818PQ6ZRF7 136 aa11.68□□□□□ -0.54
TPM1-207ENST00000403994 CROCCP3Q8IVE0 287 aa11.68□□□□□ -0.54
TPM1-207ENST00000403994 SGPP2Q8IWX5 399 aa11.68□□□□□ -0.54
TPM1-207ENST00000403994 OR5AP2Q8NGF4 316 aa11.68□□□□□ -0.54
TPM1-207ENST00000403994 FYTTD1Q96QD9 318 aaKnown RBP11.68□□□□□ -0.54
TPM1-207ENST00000403994 IFT46Q9NQC8 304 aa11.68□□□□□ -0.54
TPM1-207ENST00000403994 SLC2A9Q9NRM0 540 aa11.68□□□□□ -0.54
TPM1-207ENST00000403994 DPPA5A6NC42 116 aa11.67□□□□□ -0.54
TPM1-207ENST00000403994 A8MZ25 164 aa11.67□□□□□ -0.54
TPM1-207ENST00000403994 PPP5D1E7EU14 171 aa11.67□□□□□ -0.54
TPM1-207ENST00000403994 H0Y980 276 aa11.67□□□□□ -0.54
TPM1-207ENST00000403994 SULT1C2O00338 296 aa11.67□□□□□ -0.54
TPM1-207ENST00000403994 MYOD1P15172 320 aa11.67□□□□□ -0.54
TPM1-207ENST00000403994 LSM3P62310 102 aaKnown RBP11.67□□□□□ -0.54
TPM1-207ENST00000403994 CATR1Q13166 79 aa11.67□□□□□ -0.54
TPM1-207ENST00000403994 TATDN3Q17R31 274 aa11.67□□□□□ -0.54
TPM1-207ENST00000403994 SPAG16Q8N0X2 631 aa11.67□□□□□ -0.54
TPM1-207ENST00000403994 Q8N402 240 aa11.67□□□□□ -0.54
TPM1-207ENST00000403994 SAMD12Q8N8I0 201 aa11.67□□□□□ -0.54
TPM1-207ENST00000403994 ZBTB34Q8NCN2 500 aa11.67□□□□□ -0.54
TPM1-207ENST00000403994 OR51H1Q8NH63 302 aa11.67□□□□□ -0.54
TPM1-207ENST00000403994 CCDC140Q96MF4 163 aa11.67□□□□□ -0.54
TPM1-207ENST00000403994 TM2D3Q9BRN9 247 aa11.67□□□□□ -0.54
TPM1-207ENST00000403994 VCX3AQ9NNX9 186 aa11.67□□□□□ -0.54
TPM1-207ENST00000403994 C19orf73Q9NVV2 129 aa11.67□□□□□ -0.54
TPM1-207ENST00000403994 BET1LQ9NYM9 111 aa11.67□□□□□ -0.54
TPM1-207ENST00000403994 PEMTQ9UBM1 199 aa11.67□□□□□ -0.54
TPM1-207ENST00000403994 ANAPC10Q9UM13 185 aa11.67□□□□□ -0.54
TPM1-207ENST00000403994 A0A087WXM4 84 aa11.66□□□□□ -0.54
TPM1-207ENST00000403994 IZUMO1RA6ND01 250 aa11.66□□□□□ -0.54
TPM1-207ENST00000403994 CGB1A6NKQ9 187 aa11.66□□□□□ -0.54
TPM1-207ENST00000403994 C3orf84H3BNL1 204 aa11.66□□□□□ -0.54
TPM1-207ENST00000403994 TNFAIP8O95379 198 aa11.66□□□□□ -0.54
TPM1-207ENST00000403994 HLA-GP17693 338 aa11.66□□□□□ -0.54
TPM1-207ENST00000403994 RPS19P39019 145 aaKnown RBP11.66□□□□□ -0.54
TPM1-207ENST00000403994 TAS2R31P59538 309 aa11.66□□□□□ -0.54
TPM1-207ENST00000403994 TAS2R20P59543 309 aa11.66□□□□□ -0.54
TPM1-207ENST00000403994 HERV-K104P61576 105 aa11.66□□□□□ -0.54
TPM1-207ENST00000403994 FAM209BQ5JX69 171 aa11.66□□□□□ -0.54
TPM1-207ENST00000403994 TMEM69Q5SWH9 247 aa11.66□□□□□ -0.54
TPM1-207ENST00000403994 ADAMTSL5Q6ZMM2 481 aa11.66□□□□□ -0.54
TPM1-207ENST00000403994 TSPAN14Q8NG11 270 aa11.66□□□□□ -0.54
TPM1-207ENST00000403994 OR4A5Q8NH83 315 aa11.66□□□□□ -0.54
TPM1-207ENST00000403994 GIMAP1Q8WWP7 306 aa11.66□□□□□ -0.54
TPM1-207ENST00000403994 FANCD2OSQ96PS1 177 aa11.66□□□□□ -0.54
TPM1-207ENST00000403994 ZMAT4Q9H898 229 aa11.66□□□□□ -0.54
TPM1-207ENST00000403994 EHFQ9NZC4 300 aa11.66□□□□□ -0.54
TPM1-207ENST00000403994 FBXL7Q9UJT9 491 aa11.66□□□□□ -0.54
TPM1-207ENST00000403994 DMRT1Q9Y5R6 373 aa11.66□□□□□ -0.54
TPM1-207ENST00000403994 RYR2Q92736 4967 aa11.65□□□□□ -0.54
TPM1-207ENST00000403994 S1PR2O95136 353 aa11.65□□□□□ -0.54
TPM1-207ENST00000403994 HLA-AP01891 365 aaKnown RBP11.65□□□□□ -0.54
TPM1-207ENST00000403994 REG1AP05451 166 aa11.65□□□□□ -0.54
TPM1-207ENST00000403994 CRYGCP07315 174 aa11.65□□□□□ -0.54
TPM1-207ENST00000403994 CTRB1P17538 263 aa11.65□□□□□ -0.54
TPM1-207ENST00000403994 PSMB6P28072 239 aa11.65□□□□□ -0.54
TPM1-207ENST00000403994 POU2AF1Q16633 256 aa11.65□□□□□ -0.54
TPM1-207ENST00000403994 AADACL3Q5VUY0 350 aa11.65□□□□□ -0.54
TPM1-207ENST00000403994 CTRB2Q6GPI1 263 aa11.65□□□□□ -0.54
TPM1-207ENST00000403994 GTSCR1Q86UQ5 136 aa11.65□□□□□ -0.54
TPM1-207ENST00000403994 OR2K2Q8NGT1 345 aa11.65□□□□□ -0.54
TPM1-207ENST00000403994 MUC7Q8TAX7 377 aa11.65□□□□□ -0.54
TPM1-207ENST00000403994 S100A16Q96FQ6 103 aaKnown RBP11.65□□□□□ -0.54
TPM1-207ENST00000403994 HRASLSQ9HDD0 168 aa11.65□□□□□ -0.54
TPM1-207ENST00000403994 NDUFB8O95169 186 aa11.64□□□□□ -0.55
TPM1-207ENST00000403994 DHFRP00374 187 aa11.64□□□□□ -0.55
TPM1-207ENST00000403994 HPRT1P00492 218 aa11.64□□□□□ -0.55
TPM1-207ENST00000403994 IGHV3-23P01764 117 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms