RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 J3QRE1 110 aa1.74□□□□□ -2.13
HMGB1P17-201ENST00000403495 LST1O00453 97 aa1.74□□□□□ -2.13
HMGB1P17-201ENST00000403495 SLC17A3O00476 420 aa1.74□□□□□ -2.13
HMGB1P17-201ENST00000403495 LY6HO94772 140 aa1.74□□□□□ -2.13
HMGB1P17-201ENST00000403495 CPMP14384 443 aa1.74□□□□□ -2.13
HMGB1P17-201ENST00000403495 GZMHP20718 246 aa1.74□□□□□ -2.13
HMGB1P17-201ENST00000403495 CRHBPP24387 322 aa1.74□□□□□ -2.13
HMGB1P17-201ENST00000403495 G0S2P27469 103 aa1.74□□□□□ -2.13
HMGB1P17-201ENST00000403495 RPL5P46777 297 aaKnown RBP1.74□□□□□ -2.13
HMGB1P17-201ENST00000403495 ZNF140P52738 457 aaPredicted RBP1.74□□□□□ -2.13
HMGB1P17-201ENST00000403495 SNRPD2P62316 118 aaKnown RBP1.74□□□□□ -2.13
HMGB1P17-201ENST00000403495 RUNX1Q01196 453 aa1.74□□□□□ -2.13
HMGB1P17-201ENST00000403495 GNA12Q03113 381 aa1.74□□□□□ -2.13
HMGB1P17-201ENST00000403495 TMEM42Q69YG0 159 aa1.74□□□□□ -2.13
HMGB1P17-201ENST00000403495 RASL11AQ6T310 242 aa1.74□□□□□ -2.13
HMGB1P17-201ENST00000403495 TMPPEQ6ZT21 453 aa1.74□□□□□ -2.13
HMGB1P17-201ENST00000403495 GPHB5Q86YW7 130 aa1.74□□□□□ -2.13
HMGB1P17-201ENST00000403495 OR11H2Q8NH07 326 aa1.74□□□□□ -2.13
HMGB1P17-201ENST00000403495 RPS4Y2Q8TD47 263 aa1.74□□□□□ -2.13
HMGB1P17-201ENST00000403495 RNASE6Q93091 150 aaKnown RBP1.74□□□□□ -2.13
HMGB1P17-201ENST00000403495 ROPN1LQ96C74 230 aa1.74□□□□□ -2.13
HMGB1P17-201ENST00000403495 NMNAT3Q96T66 252 aa1.74□□□□□ -2.13
HMGB1P17-201ENST00000403495 SELENOSQ9BQE4 189 aa1.74□□□□□ -2.13
HMGB1P17-201ENST00000403495 SMDT1Q9H4I9 107 aa1.74□□□□□ -2.13
HMGB1P17-201ENST00000403495 NMNAT1Q9HAN9 279 aaPredicted RBP1.74□□□□□ -2.13
HMGB1P17-201ENST00000403495 ENY2Q9NPA8 101 aa1.74□□□□□ -2.13
HMGB1P17-201ENST00000403495 TAAR3PQ9P1P4 343 aa1.74□□□□□ -2.13
HMGB1P17-201ENST00000403495 ATPIF1Q9UII2 106 aa1.74□□□□□ -2.13
HMGB1P17-201ENST00000403495 FAM32AQ9Y421 112 aaKnown RBP1.74□□□□□ -2.13
HMGB1P17-201ENST00000403495 TRPM3Q9HCF6 1732 aaPredicted RBP1.74□□□□□ -2.13
HMGB1P17-201ENST00000403495 PIK3C2GO75747 1445 aa1.74□□□□□ -2.13
HMGB1P17-201ENST00000403495 CACNA1SQ13698 1873 aa1.73□□□□□ -2.13
HMGB1P17-201ENST00000403495 MTUS2Q5JR59 1369 aa1.73□□□□□ -2.13
HMGB1P17-201ENST00000403495 DHX57Q6P158 1386 aaKnown RBP1.73□□□□□ -2.13
HMGB1P17-201ENST00000403495 ADAMTSL1Q8N6G6 1762 aa1.73□□□□□ -2.13
HMGB1P17-201ENST00000403495 FAM236DA0A1B0GTK5 79 aa1.73□□□□□ -2.13
HMGB1P17-201ENST00000403495 OR4C46A6NHA9 309 aa1.73□□□□□ -2.13
HMGB1P17-201ENST00000403495 TMEM238C9JI98 176 aa1.73□□□□□ -2.13
HMGB1P17-201ENST00000403495 ZNF878C9JN71 531 aa1.73□□□□□ -2.13
HMGB1P17-201ENST00000403495 PDE6DO43924 150 aa1.73□□□□□ -2.13
HMGB1P17-201ENST00000403495 ZNF189O75820 626 aaPredicted RBP1.73□□□□□ -2.13
HMGB1P17-201ENST00000403495 OR2B3O76000 313 aa1.73□□□□□ -2.13
HMGB1P17-201ENST00000403495 HLA-DRB1P01911 266 aa1.73□□□□□ -2.13
HMGB1P17-201ENST00000403495 SERPINA7P05543 415 aa1.73□□□□□ -2.13
HMGB1P17-201ENST00000403495 FAM236CP0DP71 79 aa1.73□□□□□ -2.13
HMGB1P17-201ENST00000403495 CCL3P10147 92 aa1.73□□□□□ -2.13
HMGB1P17-201ENST00000403495 KCNE1P15382 129 aa1.73□□□□□ -2.13
HMGB1P17-201ENST00000403495 LPAR6P43657 344 aa1.73□□□□□ -2.13
HMGB1P17-201ENST00000403495 GABRA2P47869 451 aa1.73□□□□□ -2.13
HMGB1P17-201ENST00000403495 SERPINB10P48595 397 aa1.73□□□□□ -2.13
HMGB1P17-201ENST00000403495 FKBP1AP62942 108 aaKnown RBP1.73□□□□□ -2.13
HMGB1P17-201ENST00000403495 ZNF181Q2M3W8 571 aa1.73□□□□□ -2.13
HMGB1P17-201ENST00000403495 TNFAIP8L3Q5GJ75 292 aa1.73□□□□□ -2.13
HMGB1P17-201ENST00000403495 GLT8D1Q68CQ7 371 aa1.73□□□□□ -2.13
HMGB1P17-201ENST00000403495 SLC35F6Q8N357 371 aa1.73□□□□□ -2.13
HMGB1P17-201ENST00000403495 ANKRD29Q8N6D5 301 aa1.73□□□□□ -2.13
HMGB1P17-201ENST00000403495 ZNF676Q8N7Q3 588 aa1.73□□□□□ -2.13
HMGB1P17-201ENST00000403495 OR51A2Q8NGJ7 313 aa1.73□□□□□ -2.13
HMGB1P17-201ENST00000403495 OR4X1Q8NH49 305 aa1.73□□□□□ -2.13
HMGB1P17-201ENST00000403495 SGMS2Q8NHU3 365 aa1.73□□□□□ -2.13
HMGB1P17-201ENST00000403495 CAPZA3Q96KX2 299 aa1.73□□□□□ -2.13
HMGB1P17-201ENST00000403495 VCX3BQ9H321 246 aa1.73□□□□□ -2.13
HMGB1P17-201ENST00000403495 PRTFDC1Q9NRG1 225 aa1.73□□□□□ -2.13
HMGB1P17-201ENST00000403495 IDI2-AS1Q9NZ38 188 aa1.73□□□□□ -2.13
HMGB1P17-201ENST00000403495 PRELID1Q9Y255 219 aa1.73□□□□□ -2.13
HMGB1P17-201ENST00000403495 KLK5Q9Y337 293 aaPredicted RBP1.73□□□□□ -2.13
HMGB1P17-201ENST00000403495 HEY1Q9Y5J3 304 aa1.73□□□□□ -2.13
HMGB1P17-201ENST00000403495 DOCK6Q96HP0 2047 aa1.73□□□□□ -2.13
HMGB1P17-201ENST00000403495 HIVEP2P31629 2446 aa1.72□□□□□ -2.13
HMGB1P17-201ENST00000403495 A0A087WUU8 490 aa1.72□□□□□ -2.13
HMGB1P17-201ENST00000403495 IGHV3-73A0A0B4J1V6 119 aa1.72□□□□□ -2.13
HMGB1P17-201ENST00000403495 A0A1B0GW54 56 aa1.72□□□□□ -2.13
HMGB1P17-201ENST00000403495 GRIFINA4D1Z8 144 aa1.72□□□□□ -2.13
HMGB1P17-201ENST00000403495 C17orf51A8MQB3 221 aa1.72□□□□□ -2.13
HMGB1P17-201ENST00000403495 A8MUN3 132 aa1.72□□□□□ -2.13
HMGB1P17-201ENST00000403495 FAAHO00519 579 aa1.72□□□□□ -2.13
HMGB1P17-201ENST00000403495 UBFD1O14562 309 aaKnown RBP1.72□□□□□ -2.13
HMGB1P17-201ENST00000403495 PLA2G10O15496 165 aa1.72□□□□□ -2.13
HMGB1P17-201ENST00000403495 OR7C1O76099 320 aaPredicted RBP1.72□□□□□ -2.13
HMGB1P17-201ENST00000403495 CRYZL1O95825 349 aa1.72□□□□□ -2.13
HMGB1P17-201ENST00000403495 ZNF705DP0CH99 300 aaPredicted RBP1.72□□□□□ -2.13
HMGB1P17-201ENST00000403495 RPL27AP46776 148 aaKnown RBP1.72□□□□□ -2.13
HMGB1P17-201ENST00000403495 DEFA1P59665 94 aa1.72□□□□□ -2.13
HMGB1P17-201ENST00000403495 KRTAP12-3P60328 96 aa1.72□□□□□ -2.13
HMGB1P17-201ENST00000403495 B2MP61769 119 aa1.72□□□□□ -2.13
HMGB1P17-201ENST00000403495 RPL19P84098 196 aaKnown RBP1.72□□□□□ -2.13
HMGB1P17-201ENST00000403495 ZNF117Q03924 483 aa1.72□□□□□ -2.13
HMGB1P17-201ENST00000403495 KRR1Q13601 381 aaKnown RBP1.72□□□□□ -2.13
HMGB1P17-201ENST00000403495 HES1Q14469 280 aa1.72□□□□□ -2.13
HMGB1P17-201ENST00000403495 GRK1Q15835 563 aa1.72□□□□□ -2.13
HMGB1P17-201ENST00000403495 KCNJ8Q15842 424 aa1.72□□□□□ -2.13
HMGB1P17-201ENST00000403495 LGALS9BQ3B8N2 356 aa1.72□□□□□ -2.13
HMGB1P17-201ENST00000403495 LGALS9CQ6DKI2 356 aa1.72□□□□□ -2.13
HMGB1P17-201ENST00000403495 DHRS4L2Q6PKH6 230 aa1.72□□□□□ -2.13
HMGB1P17-201ENST00000403495 ZNF322Q6U7Q0 402 aaPredicted RBP1.72□□□□□ -2.13
HMGB1P17-201ENST00000403495 SPATA12Q7Z6I5 190 aa1.72□□□□□ -2.13
HMGB1P17-201ENST00000403495 TBC1D19Q8N5T2 526 aa1.72□□□□□ -2.13
HMGB1P17-201ENST00000403495 CNEP1R1Q8N9A8 125 aa1.72□□□□□ -2.13
HMGB1P17-201ENST00000403495 OR8B12Q8NGG6 310 aa1.72□□□□□ -2.13
HMGB1P17-201ENST00000403495 OR13C8Q8NGS7 320 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms