RNA–Protein interactions for RNA: ENST00000399629.5

CACNA1C-213, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-213ENST00000399629 NPBWR2P48146 333 aa10.23□□□□□ -0.77
CACNA1C-213ENST00000399629 SELENOHQ8IZQ5 122 aaKnown RBP10.23□□□□□ -0.77
CACNA1C-213ENST00000399629 C10orf111Q8N326 155 aa10.23□□□□□ -0.77
CACNA1C-213ENST00000399629 DNLZQ5SXM8 178 aa10.23□□□□□ -0.77
CACNA1C-213ENST00000399629 TMEM222Q9H0R3 208 aa10.23□□□□□ -0.77
CACNA1C-213ENST00000399629 WDR90Q96KV7 1748 aa10.23□□□□□ -0.77
CACNA1C-213ENST00000399629 ZP3P21754 424 aa10.23□□□□□ -0.77
CACNA1C-213ENST00000399629 ATP6V0CP27449 155 aa10.23□□□□□ -0.77
CACNA1C-213ENST00000399629 GPR146Q96CH1 333 aa10.23□□□□□ -0.77
CACNA1C-213ENST00000399629 TCF19Q9Y242 345 aa10.23□□□□□ -0.77
CACNA1C-213ENST00000399629 RNF114Q9Y508 228 aa10.23□□□□□ -0.77
CACNA1C-213ENST00000399629 IGLV1-36A0A0B4J1U3 117 aa10.23□□□□□ -0.77
CACNA1C-213ENST00000399629 LYNX1G3V0Z9 82 aa10.23□□□□□ -0.77
CACNA1C-213ENST00000399629 LMX1BO60663 402 aa10.23□□□□□ -0.77
CACNA1C-213ENST00000399629 ALX3O95076 343 aa10.23□□□□□ -0.77
CACNA1C-213ENST00000399629 LYNX1P0DP58 116 aa10.23□□□□□ -0.77
CACNA1C-213ENST00000399629 CYP2G1PQ6ZSU1 146 aa10.23□□□□□ -0.77
CACNA1C-213ENST00000399629 M0R381 172 aa10.23□□□□□ -0.77
CACNA1C-213ENST00000399629 EFNA4P52798 201 aa10.23□□□□□ -0.77
CACNA1C-213ENST00000399629 NANOS3P60323 173 aaKnown RBP10.23□□□□□ -0.77
CACNA1C-213ENST00000399629 PRSS53Q2L4Q9 553 aa10.23□□□□□ -0.77
CACNA1C-213ENST00000399629 PQLC2Q6ZP29 291 aa10.23□□□□□ -0.77
CACNA1C-213ENST00000399629 FAM206AQ9NX38 181 aa10.23□□□□□ -0.77
CACNA1C-213ENST00000399629 HMSDA8MTL9 139 aa10.22□□□□□ -0.77
CACNA1C-213ENST00000399629 ZIC3O60481 467 aa10.22□□□□□ -0.77
CACNA1C-213ENST00000399629 TMEM42Q69YG0 159 aa10.22□□□□□ -0.77
CACNA1C-213ENST00000399629 TAF1LQ8IZX4 1826 aa10.22□□□□□ -0.77
CACNA1C-213ENST00000399629 FAM74A7A6NL05 159 aa10.22□□□□□ -0.77
CACNA1C-213ENST00000399629 DUSP14O95147 198 aaKnown RBP10.22□□□□□ -0.77
CACNA1C-213ENST00000399629 H0YL77 283 aa10.22□□□□□ -0.77
CACNA1C-213ENST00000399629 NBR2O15453 112 aa10.22□□□□□ -0.77
CACNA1C-213ENST00000399629 IGLV3-19P01714 112 aa10.22□□□□□ -0.77
CACNA1C-213ENST00000399629 SERF2P84101 59 aa10.22□□□□□ -0.77
CACNA1C-213ENST00000399629 TEX45Q8NA69 505 aa10.22□□□□□ -0.77
CACNA1C-213ENST00000399629 AQP3Q92482 292 aa10.22□□□□□ -0.77
CACNA1C-213ENST00000399629 SMIM10L1P0DMW3 83 aa10.22□□□□□ -0.77
CACNA1C-213ENST00000399629 TNFRSF9Q07011 255 aa10.22□□□□□ -0.77
CACNA1C-213ENST00000399629 SAPCD1Q5SSQ6 148 aa10.22□□□□□ -0.77
CACNA1C-213ENST00000399629 SMIM10Q96HG1 83 aa10.22□□□□□ -0.77
CACNA1C-213ENST00000399629 CRIM1Q9NZV1 1036 aa10.22□□□□□ -0.77
CACNA1C-213ENST00000399629 NEUROG3Q9Y4Z2 214 aa10.22□□□□□ -0.77
CACNA1C-213ENST00000399629 B4DSR2 109 aa10.22□□□□□ -0.77
CACNA1C-213ENST00000399629 DNAL4O96015 105 aa10.22□□□□□ -0.77
CACNA1C-213ENST00000399629 UMODP07911 640 aa10.22□□□□□ -0.77
CACNA1C-213ENST00000399629 GLMPQ8WWB7 406 aa10.22□□□□□ -0.77
CACNA1C-213ENST00000399629 MRPS18CQ9Y3D5 142 aaKnown RBP10.22□□□□□ -0.77
CACNA1C-213ENST00000399629 LINC00312Q9Y6C7 94 aa10.22□□□□□ -0.77
CACNA1C-213ENST00000399629 TRBV20OR9-2A0A075B6H5 130 aa10.21□□□□□ -0.77
CACNA1C-213ENST00000399629 H3BRM9 83 aa10.21□□□□□ -0.77
CACNA1C-213ENST00000399629 CA2P00918 260 aa10.21□□□□□ -0.77
CACNA1C-213ENST00000399629 ST6GALNAC3Q8NDV1 305 aa10.21□□□□□ -0.77
CACNA1C-213ENST00000399629 OR5AN1Q8NGI8 311 aa10.21□□□□□ -0.77
CACNA1C-213ENST00000399629 COL4A5P29400 1685 aa10.21□□□□□ -0.77
CACNA1C-213ENST00000399629 NDUFB4O95168 129 aa10.21□□□□□ -0.77
CACNA1C-213ENST00000399629 CELA3BP08861 270 aa10.21□□□□□ -0.77
CACNA1C-213ENST00000399629 IL6RP08887 468 aaPredicted RBP10.21□□□□□ -0.77
CACNA1C-213ENST00000399629 ICAM4Q14773 271 aa10.21□□□□□ -0.77
CACNA1C-213ENST00000399629 XAF1Q6GPH4 301 aa10.21□□□□□ -0.77
CACNA1C-213ENST00000399629 DMRTA2Q96SC8 542 aa10.21□□□□□ -0.77
CACNA1C-213ENST00000399629 LOC102723996A0A087X1L8 192 aa10.21□□□□□ -0.78
CACNA1C-213ENST00000399629 KBTBD11-OT1A0A1B0GTJ5 212 aa10.21□□□□□ -0.78
CACNA1C-213ENST00000399629 A0A1W2PP11 408 aa10.21□□□□□ -0.78
CACNA1C-213ENST00000399629 ARL14EPLP0DKL9 152 aa10.21□□□□□ -0.78
CACNA1C-213ENST00000399629 RPS11P62280 158 aaKnown RBP eCLIP10.21□□□□□ -0.78
CACNA1C-213ENST00000399629 RPL24P83731 157 aaKnown RBP10.21□□□□□ -0.78
CACNA1C-213ENST00000399629 TCF24Q7RTU0 167 aa10.21□□□□□ -0.78
CACNA1C-213ENST00000399629 RFLNBQ8N5W9 214 aa10.21□□□□□ -0.78
CACNA1C-213ENST00000399629 RAB24Q969Q5 203 aa10.21□□□□□ -0.78
CACNA1C-213ENST00000399629 MRPL20Q9BYC9 149 aaKnown RBP10.21□□□□□ -0.78
CACNA1C-213ENST00000399629 TNFSF18Q9UNG2 199 aa10.21□□□□□ -0.78
CACNA1C-213ENST00000399629 ZNFX1Q9P2E3 1918 aaKnown RBP10.21□□□□□ -0.78
CACNA1C-213ENST00000399629 COL11A1P12107 1806 aaPredicted RBP10.21□□□□□ -0.78
CACNA1C-213ENST00000399629 IGHV3OR16-8A0A075B7F1 116 aa10.21□□□□□ -0.78
CACNA1C-213ENST00000399629 PET117Q6UWS5 81 aa10.21□□□□□ -0.78
CACNA1C-213ENST00000399629 LINC01356Q8N9X3 169 aa10.21□□□□□ -0.78
CACNA1C-213ENST00000399629 POC1AQ8NBT0 407 aa10.21□□□□□ -0.78
CACNA1C-213ENST00000399629 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.21□□□□□ -0.78
CACNA1C-213ENST00000399629 OSR1Q8TAX0 266 aaPredicted RBP10.21□□□□□ -0.78
CACNA1C-213ENST00000399629 SOX21Q9Y651 276 aaPredicted RBP10.21□□□□□ -0.78
CACNA1C-213ENST00000399629 KIF13BQ9NQT8 1826 aa10.21□□□□□ -0.78
CACNA1C-213ENST00000399629 GREM1O60565 184 aa10.21□□□□□ -0.78
CACNA1C-213ENST00000399629 ZNF585BQ52M93 769 aa10.21□□□□□ -0.78
CACNA1C-213ENST00000399629 NUDT10Q8NFP7 164 aa10.21□□□□□ -0.78
CACNA1C-213ENST00000399629 WNT10AQ9GZT5 417 aa10.21□□□□□ -0.78
CACNA1C-213ENST00000399629 IFI6P09912 130 aa10.2□□□□□ -0.78
CACNA1C-213ENST00000399629 ZP1P60852 638 aa10.2□□□□□ -0.78
CACNA1C-213ENST00000399629 H1FOOQ8IZA3 346 aaPredicted RBP10.2□□□□□ -0.78
CACNA1C-213ENST00000399629 SPRR3Q9UBC9 169 aa10.2□□□□□ -0.78
CACNA1C-213ENST00000399629 C19orf24Q9BVV8 132 aa10.2□□□□□ -0.78
CACNA1C-213ENST00000399629 SIPA1L3O60292 1781 aaPredicted RBP10.2□□□□□ -0.78
CACNA1C-213ENST00000399629 JOSD1Q15040 202 aaPredicted RBP10.2□□□□□ -0.78
CACNA1C-213ENST00000399629 AWAT1Q58HT5 328 aa10.2□□□□□ -0.78
CACNA1C-213ENST00000399629 RGP1Q92546 391 aaPredicted RBP10.2□□□□□ -0.78
CACNA1C-213ENST00000399629 SLIRPQ9GZT3 109 aaKnown RBP10.2□□□□□ -0.78
CACNA1C-213ENST00000399629 MSRB2Q9Y3D2 182 aa10.2□□□□□ -0.78
CACNA1C-213ENST00000399629 LOC107984156A0A0G2JMH3 177 aa10.2□□□□□ -0.78
CACNA1C-213ENST00000399629 LOC390937A0A1W2PQ73 354 aa10.2□□□□□ -0.78
CACNA1C-213ENST00000399629 FAM90A26D6RGX4 464 aa10.2□□□□□ -0.78
CACNA1C-213ENST00000399629 HLA-DRB1P01911 266 aa10.2□□□□□ -0.78
CACNA1C-213ENST00000399629 VMO1Q7Z5L0 202 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms