RNA–Protein interactions for RNA: ENST00000399409.7

RABGGTA-202, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-202ENST00000399409 IGHV3-7P01780 117 aa19.04■□□□□ 0.64
RABGGTA-202ENST00000399409 TXNDC17Q9BRA2 123 aa19.04■□□□□ 0.64
RABGGTA-202ENST00000399409 GCM1Q9NP62 436 aa19.04■□□□□ 0.64
RABGGTA-202ENST00000399409 FOXA2Q9Y261 457 aaPredicted RBP19.04■□□□□ 0.64
RABGGTA-202ENST00000399409 TRAV3A0A0B4J244 114 aa19.03■□□□□ 0.64
RABGGTA-202ENST00000399409 GALR1P47211 349 aa19.03■□□□□ 0.64
RABGGTA-202ENST00000399409 KRTCAP3Q53RY4 240 aa19.03■□□□□ 0.64
RABGGTA-202ENST00000399409 HIST3H2BBQ8N257 126 aa19.03■□□□□ 0.64
RABGGTA-202ENST00000399409 F6UZH7 168 aa19.03■□□□□ 0.64
RABGGTA-202ENST00000399409 IGHV1-46P01743 117 aa19.03■□□□□ 0.64
RABGGTA-202ENST00000399409 OR51G1Q8NGK1 321 aa19.03■□□□□ 0.64
RABGGTA-202ENST00000399409 MS4A5Q9H3V2 200 aa19.03■□□□□ 0.64
RABGGTA-202ENST00000399409 LINC00574Q9H8X3 128 aa19.03■□□□□ 0.64
RABGGTA-202ENST00000399409 SAA2-SAA4A0A096LPE2 208 aa19.02■□□□□ 0.64
RABGGTA-202ENST00000399409 ZNF729A6NN14 1252 aaPredicted RBP19.02■□□□□ 0.64
RABGGTA-202ENST00000399409 SAA2P0DJI9 122 aaPredicted RBP19.02■□□□□ 0.64
RABGGTA-202ENST00000399409 MRPS11P82912 194 aaKnown RBP19.02■□□□□ 0.64
RABGGTA-202ENST00000399409 FAM201AQ5SY85 155 aa19.02■□□□□ 0.64
RABGGTA-202ENST00000399409 FAM57AQ8TBR7 257 aa19.02■□□□□ 0.64
RABGGTA-202ENST00000399409 GAFA1Q96PS6 74 aa19.02■□□□□ 0.64
RABGGTA-202ENST00000399409 MGST2Q99735 147 aa19.02■□□□□ 0.64
RABGGTA-202ENST00000399409 IDI2-AS1Q9NZ38 188 aa19.02■□□□□ 0.64
RABGGTA-202ENST00000399409 CACNA1HO95180 2353 aa19.02■□□□□ 0.63
RABGGTA-202ENST00000399409 HCFC1P51610 2035 aa19.02■□□□□ 0.63
RABGGTA-202ENST00000399409 TRAV38-1A0A0B4J264 116 aa19.02■□□□□ 0.63
RABGGTA-202ENST00000399409 TM4SF5O14894 197 aa19.02■□□□□ 0.63
RABGGTA-202ENST00000399409 HRASP01112 189 aa19.02■□□□□ 0.63
RABGGTA-202ENST00000399409 SELLP14151 372 aa19.02■□□□□ 0.63
RABGGTA-202ENST00000399409 HSPE1P61604 102 aaKnown RBP19.02■□□□□ 0.63
RABGGTA-202ENST00000399409 C1orf229Q6ZS94 237 aaPredicted RBP19.02■□□□□ 0.63
RABGGTA-202ENST00000399409 ABHD12Q8N2K0 398 aa19.02■□□□□ 0.63
RABGGTA-202ENST00000399409 ZNF439Q8NDP4 499 aa19.02■□□□□ 0.63
RABGGTA-202ENST00000399409 RHOVQ96L33 236 aa19.02■□□□□ 0.63
RABGGTA-202ENST00000399409 GGTLC1Q9BX51 225 aa19.02■□□□□ 0.63
RABGGTA-202ENST00000399409 NPVFQ9HCQ7 196 aa19.02■□□□□ 0.63
RABGGTA-202ENST00000399409 TMEM14BQ9NUH8 114 aa19.02■□□□□ 0.63
RABGGTA-202ENST00000399409 POU2AF1Q16633 256 aa19.01■□□□□ 0.63
RABGGTA-202ENST00000399409 RBMXL3Q8N7X1 1067 aaKnown RBP19.01■□□□□ 0.63
RABGGTA-202ENST00000399409 CORO2AQ92828 525 aa19.01■□□□□ 0.63
RABGGTA-202ENST00000399409 ENY2Q9NPA8 101 aa19.01■□□□□ 0.63
RABGGTA-202ENST00000399409 PXMP4Q9Y6I8 212 aa19.01■□□□□ 0.63
RABGGTA-202ENST00000399409 SRP14P37108 136 aaKnown RBP19■□□□□ 0.63
RABGGTA-202ENST00000399409 GCSAMLQ5JQS6 135 aa19■□□□□ 0.63
RABGGTA-202ENST00000399409 OR4A47Q6IF82 309 aa19■□□□□ 0.63
RABGGTA-202ENST00000399409 TMEM170AQ8WVE7 144 aa19■□□□□ 0.63
RABGGTA-202ENST00000399409 LEAP2Q969E1 77 aa19■□□□□ 0.63
RABGGTA-202ENST00000399409 A8MXE2 369 aa19■□□□□ 0.63
RABGGTA-202ENST00000399409 LINC00587B1AMM8 73 aa19■□□□□ 0.63
RABGGTA-202ENST00000399409 CD40P25942 277 aa19■□□□□ 0.63
RABGGTA-202ENST00000399409 ZNF788Q6ZQV5 615 aa19■□□□□ 0.63
RABGGTA-202ENST00000399409 NUP37Q8NFH4 326 aa19■□□□□ 0.63
RABGGTA-202ENST00000399409 PITPNC1Q9UKF7 332 aa19■□□□□ 0.63
RABGGTA-202ENST00000399409 LSM4Q9Y4Z0 139 aaKnown RBP19■□□□□ 0.63
RABGGTA-202ENST00000399409 CXorf1O96002 111 aa18.99■□□□□ 0.63
RABGGTA-202ENST00000399409 SOD3P08294 240 aa18.99■□□□□ 0.63
RABGGTA-202ENST00000399409 DEFA4P12838 97 aa18.99■□□□□ 0.63
RABGGTA-202ENST00000399409 ZNF383Q8NA42 475 aa18.99■□□□□ 0.63
RABGGTA-202ENST00000399409 TMPRSS2O15393 492 aa18.99■□□□□ 0.63
RABGGTA-202ENST00000399409 STAG3L2P0CL84 134 aa18.99■□□□□ 0.63
RABGGTA-202ENST00000399409 STAG3L3P0CL85 134 aa18.99■□□□□ 0.63
RABGGTA-202ENST00000399409 CD99P14209 185 aa18.99■□□□□ 0.63
RABGGTA-202ENST00000399409 IRF2P14316 349 aa18.99■□□□□ 0.63
RABGGTA-202ENST00000399409 NPPCP23582 126 aa18.99■□□□□ 0.63
RABGGTA-202ENST00000399409 NPY1RP25929 384 aa18.99■□□□□ 0.63
RABGGTA-202ENST00000399409 LYG1Q8N1E2 194 aa18.99■□□□□ 0.63
RABGGTA-202ENST00000399409 SLC24A4Q8NFF2 622 aa18.99■□□□□ 0.63
RABGGTA-202ENST00000399409 OR4X1Q8NH49 305 aa18.99■□□□□ 0.63
RABGGTA-202ENST00000399409 FRYQ5TBA9 3013 aa18.98■□□□□ 0.63
RABGGTA-202ENST00000399409 PPP5D1E7EU14 171 aa18.98■□□□□ 0.63
RABGGTA-202ENST00000399409 FAM27E3Q08E93 113 aa18.98■□□□□ 0.63
RABGGTA-202ENST00000399409 UTF1Q5T230 341 aa18.98■□□□□ 0.63
RABGGTA-202ENST00000399409 TEX36Q5VZQ5 186 aa18.98■□□□□ 0.63
RABGGTA-202ENST00000399409 CST9LP1Q5W188 147 aa18.98■□□□□ 0.63
RABGGTA-202ENST00000399409 PATZ1Q9HBE1 687 aaKnown RBP18.98■□□□□ 0.63
RABGGTA-202ENST00000399409 FNDC10F2Z333 226 aa18.98■□□□□ 0.63
RABGGTA-202ENST00000399409 GNB1P62873 340 aa18.98■□□□□ 0.63
RABGGTA-202ENST00000399409 RAB31Q13636 194 aa18.98■□□□□ 0.63
RABGGTA-202ENST00000399409 PYY3Q5JQD4 70 aa18.98■□□□□ 0.63
RABGGTA-202ENST00000399409 MIC13Q5XKP0 118 aa18.98■□□□□ 0.63
RABGGTA-202ENST00000399409 TCF23Q7RTU1 214 aa18.98■□□□□ 0.63
RABGGTA-202ENST00000399409 NECAP1Q8NC96 275 aa18.98■□□□□ 0.63
RABGGTA-202ENST00000399409 CCL13Q99616 98 aa18.98■□□□□ 0.63
RABGGTA-202ENST00000399409 GPR61Q9BZJ8 451 aa18.98■□□□□ 0.63
RABGGTA-202ENST00000399409 PRNDQ9UKY0 176 aa18.98■□□□□ 0.63
RABGGTA-202ENST00000399409 C4orf17Q53FE4 359 aa18.97■□□□□ 0.63
RABGGTA-202ENST00000399409 DNLZQ5SXM8 178 aa18.97■□□□□ 0.63
RABGGTA-202ENST00000399409 OR10D4PQ8NGN7 298 aa18.97■□□□□ 0.63
RABGGTA-202ENST00000399409 DMRT1Q9Y5R6 373 aa18.97■□□□□ 0.63
RABGGTA-202ENST00000399409 GGCTO75223 188 aaKnown RBP18.97■□□□□ 0.63
RABGGTA-202ENST00000399409 IGHV2-70P01814 119 aa18.97■□□□□ 0.63
RABGGTA-202ENST00000399409 FAM3BP58499 235 aaPredicted RBP18.97■□□□□ 0.63
RABGGTA-202ENST00000399409 GFI1BQ5VTD9 330 aa18.97■□□□□ 0.63
RABGGTA-202ENST00000399409 KCNIP4Q6PIL6 250 aa18.97■□□□□ 0.63
RABGGTA-202ENST00000399409 DUX4L9Q6RFH8 374 aaPredicted RBP18.97■□□□□ 0.63
RABGGTA-202ENST00000399409 TEPPQ6URK8 271 aa18.97■□□□□ 0.63
RABGGTA-202ENST00000399409 DEFB108BQ8NET1 73 aa18.97■□□□□ 0.63
RABGGTA-202ENST00000399409 ATP5G3P48201 142 aa18.96■□□□□ 0.63
RABGGTA-202ENST00000399409 UBE2G2P60604 165 aa18.96■□□□□ 0.63
RABGGTA-202ENST00000399409 OR2T10Q8NGZ9 312 aa18.96■□□□□ 0.63
RABGGTA-202ENST00000399409 RPUSD1Q9UJJ7 312 aaKnown RBP18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms