RNA–Protein interactions for RNA: ENST00000399355.6

ITSN1-211, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-211ENST00000399355 FAM216AQ8WUB2 273 aa9.68□□□□□ -0.86
ITSN1-211ENST00000399355 IER2Q9BTL4 223 aa9.68□□□□□ -0.86
ITSN1-211ENST00000399355 ATPIF1Q9UII2 106 aa9.68□□□□□ -0.86
ITSN1-211ENST00000399355 SAA2-SAA4A0A096LPE2 208 aa9.68□□□□□ -0.86
ITSN1-211ENST00000399355 H3BTX0 84 aa9.68□□□□□ -0.86
ITSN1-211ENST00000399355 SAA2P0DJI9 122 aaPredicted RBP9.68□□□□□ -0.86
ITSN1-211ENST00000399355 NDUFB7P17568 137 aa9.68□□□□□ -0.86
ITSN1-211ENST00000399355 KHDC3LQ587J8 217 aa9.68□□□□□ -0.86
ITSN1-211ENST00000399355 MS4A5Q9H3V2 200 aa9.68□□□□□ -0.86
ITSN1-211ENST00000399355 NOTCH3Q9UM47 2321 aa9.68□□□□□ -0.86
ITSN1-211ENST00000399355 NUDT19A8MXV4 375 aa9.68□□□□□ -0.86
ITSN1-211ENST00000399355 UBE2CO00762 179 aa9.68□□□□□ -0.86
ITSN1-211ENST00000399355 CCKARP32238 428 aa9.68□□□□□ -0.86
ITSN1-211ENST00000399355 DUTP33316 252 aaKnown RBP9.68□□□□□ -0.86
ITSN1-211ENST00000399355 SSBP2P81877 361 aaPredicted RBP9.68□□□□□ -0.86
ITSN1-211ENST00000399355 MORN2Q502X0 79 aa9.68□□□□□ -0.86
ITSN1-211ENST00000399355 TMEM14EPQ6UXP3 125 aa9.68□□□□□ -0.86
ITSN1-211ENST00000399355 C1orf159Q96HA4 380 aa9.68□□□□□ -0.86
ITSN1-211ENST00000399355 FAM210BQ96KR6 192 aa9.68□□□□□ -0.86
ITSN1-211ENST00000399355 HES4Q9HCC6 221 aa9.68□□□□□ -0.86
ITSN1-211ENST00000399355 OOEPA6NGQ2 149 aa9.67□□□□□ -0.86
ITSN1-211ENST00000399355 AP4M1O00189 453 aa9.67□□□□□ -0.86
ITSN1-211ENST00000399355 C1orf87Q8N0U7 546 aa9.67□□□□□ -0.86
ITSN1-211ENST00000399355 OR10P1Q8NGE3 313 aa9.67□□□□□ -0.86
ITSN1-211ENST00000399355 CCL17Q92583 94 aa9.67□□□□□ -0.86
ITSN1-211ENST00000399355 CXXC4Q9H2H0 198 aa9.67□□□□□ -0.86
ITSN1-211ENST00000399355 HSPB7Q9UBY9 170 aa9.67□□□□□ -0.86
ITSN1-211ENST00000399355 SLC17A3O00476 420 aa9.67□□□□□ -0.86
ITSN1-211ENST00000399355 GRNP28799 593 aaKnown RBP9.67□□□□□ -0.86
ITSN1-211ENST00000399355 RAB5CP51148 216 aa9.67□□□□□ -0.86
ITSN1-211ENST00000399355 IMMP2LQ96T52 175 aa9.67□□□□□ -0.86
ITSN1-211ENST00000399355 SLC25A15Q9Y619 301 aa9.67□□□□□ -0.86
ITSN1-211ENST00000399355 MEF2BQ02080 365 aaPredicted RBP9.67□□□□□ -0.86
ITSN1-211ENST00000399355 GUSBP1Q15486 140 aa9.67□□□□□ -0.86
ITSN1-211ENST00000399355 FAM209BQ5JX69 171 aa9.67□□□□□ -0.86
ITSN1-211ENST00000399355 MORN5Q5VZ52 161 aa9.67□□□□□ -0.86
ITSN1-211ENST00000399355 INO80CQ6PI98 192 aaPredicted RBP9.67□□□□□ -0.86
ITSN1-211ENST00000399355 PINX1Q96BK5 328 aaKnown RBP9.67□□□□□ -0.86
ITSN1-211ENST00000399355 RITA1Q96K30 269 aa9.67□□□□□ -0.86
ITSN1-211ENST00000399355 IFI27L2Q9H2X8 130 aa9.67□□□□□ -0.86
ITSN1-211ENST00000399355 CGAP01215 116 aa9.66□□□□□ -0.86
ITSN1-211ENST00000399355 LOXL3P58215 753 aa9.66□□□□□ -0.86
ITSN1-211ENST00000399355 HBG1P69891 147 aa9.66□□□□□ -0.86
ITSN1-211ENST00000399355 HBG2P69892 147 aa9.66□□□□□ -0.86
ITSN1-211ENST00000399355 OR5I1Q13606 314 aa9.66□□□□□ -0.86
ITSN1-211ENST00000399355 RHEBQ15382 184 aa9.66□□□□□ -0.86
ITSN1-211ENST00000399355 ZNF383Q8NA42 475 aa9.66□□□□□ -0.86
ITSN1-211ENST00000399355 RIMS4Q9H426 269 aaPredicted RBP9.66□□□□□ -0.86
ITSN1-211ENST00000399355 OR6C3Q9NZP0 311 aa9.66□□□□□ -0.86
ITSN1-211ENST00000399355 GRIFINA4D1Z8 144 aa9.66□□□□□ -0.86
ITSN1-211ENST00000399355 PRR33A8MZF0 331 aa9.66□□□□□ -0.86
ITSN1-211ENST00000399355 RBFOX2O43251 390 aaKnown RBP eCLIP9.66□□□□□ -0.86
ITSN1-211ENST00000399355 ARL14EPLP0DKL9 152 aa9.66□□□□□ -0.86
ITSN1-211ENST00000399355 COX5AP20674 150 aa9.66□□□□□ -0.86
ITSN1-211ENST00000399355 EIF4EBP1Q13541 118 aaPredicted RBP9.66□□□□□ -0.86
ITSN1-211ENST00000399355 SMIM21Q3B7S5 101 aa9.66□□□□□ -0.86
ITSN1-211ENST00000399355 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.66□□□□□ -0.86
ITSN1-211ENST00000399355 TMEM140Q9NV12 185 aa9.66□□□□□ -0.86
ITSN1-211ENST00000399355 TRAV17A0A0B4J275 112 aa9.66□□□□□ -0.86
ITSN1-211ENST00000399355 RPL23P62829 140 aaKnown RBP9.66□□□□□ -0.86
ITSN1-211ENST00000399355 GAMTQ14353 236 aa9.66□□□□□ -0.86
ITSN1-211ENST00000399355 TMEM41BQ5BJD5 291 aa9.66□□□□□ -0.86
ITSN1-211ENST00000399355 LYPD2Q6UXB3 125 aa9.66□□□□□ -0.86
ITSN1-211ENST00000399355 Q71RC1 249 aaPredicted RBP9.66□□□□□ -0.86
ITSN1-211ENST00000399355 LINC00479Q96M42 142 aa9.66□□□□□ -0.86
ITSN1-211ENST00000399355 GCM1Q9NP62 436 aa9.66□□□□□ -0.86
ITSN1-211ENST00000399355 SCO2A0A1W2PP80 73 aa9.66□□□□□ -0.86
ITSN1-211ENST00000399355 CD82P27701 267 aa9.66□□□□□ -0.86
ITSN1-211ENST00000399355 UHRF2Q96PU4 802 aa9.66□□□□□ -0.86
ITSN1-211ENST00000399355 IGSF10Q6WRI0 2623 aa9.65□□□□□ -0.86
ITSN1-211ENST00000399355 NUPR1O60356 82 aa9.65□□□□□ -0.86
ITSN1-211ENST00000399355 IGHG3P01860 377 aa9.65□□□□□ -0.86
ITSN1-211ENST00000399355 SDF2L1Q9HCN8 221 aa9.65□□□□□ -0.86
ITSN1-211ENST00000399355 TPSG1Q9NRR2 321 aa9.65□□□□□ -0.86
ITSN1-211ENST00000399355 FUT9Q9Y231 359 aa9.65□□□□□ -0.86
ITSN1-211ENST00000399355 MXRA5Q9NR99 2828 aa9.65□□□□□ -0.86
ITSN1-211ENST00000399355 IGKV1OR2-108A0A075B7D4 117 aa9.65□□□□□ -0.86
ITSN1-211ENST00000399355 TRBV6-6A0A0A6YYG2 114 aa9.65□□□□□ -0.86
ITSN1-211ENST00000399355 PRSS44E7EML9 344 aa9.65□□□□□ -0.86
ITSN1-211ENST00000399355 CA1P00915 261 aaPredicted RBP9.65□□□□□ -0.86
ITSN1-211ENST00000399355 CD24P25063 80 aa9.65□□□□□ -0.86
ITSN1-211ENST00000399355 SLC35E4Q6ICL7 350 aa9.65□□□□□ -0.86
ITSN1-211ENST00000399355 H1FXQ92522 213 aaKnown RBP9.65□□□□□ -0.86
ITSN1-211ENST00000399355 ABHD17AQ96GS6 310 aa9.65□□□□□ -0.86
ITSN1-211ENST00000399355 MGST2Q99735 147 aa9.65□□□□□ -0.86
ITSN1-211ENST00000399355 TP53TG5Q9Y2B4 290 aa9.65□□□□□ -0.86
ITSN1-211ENST00000399355 C11orf94C9JXX5 98 aa9.65□□□□□ -0.87
ITSN1-211ENST00000399355 DVL1O14640 695 aa9.65□□□□□ -0.87
ITSN1-211ENST00000399355 TOX4O94842 621 aa9.65□□□□□ -0.87
ITSN1-211ENST00000399355 P0C879 139 aa9.65□□□□□ -0.87
ITSN1-211ENST00000399355 IGFBP2P18065 325 aa9.65□□□□□ -0.87
ITSN1-211ENST00000399355 C17orf58Q2M2W7 97 aa9.65□□□□□ -0.87
ITSN1-211ENST00000399355 ARSJQ5FYB0 599 aaPredicted RBP9.65□□□□□ -0.87
ITSN1-211ENST00000399355 RBMXL3Q8N7X1 1067 aaKnown RBP9.65□□□□□ -0.87
ITSN1-211ENST00000399355 LSM10Q969L4 123 aaKnown RBP9.65□□□□□ -0.87
ITSN1-211ENST00000399355 SARAFQ96BY9 339 aa9.65□□□□□ -0.87
ITSN1-211ENST00000399355 LRFN3Q9BTN0 628 aa9.65□□□□□ -0.87
ITSN1-211ENST00000399355 GSX1Q9H4S2 264 aaPredicted RBP9.65□□□□□ -0.87
ITSN1-211ENST00000399355 CALYQ9NYX4 217 aa9.65□□□□□ -0.87
ITSN1-211ENST00000399355 EPG5Q9HCE0 2579 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms