RNA–Protein interactions for RNA: ENST00000399349.5

ITSN1-208, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 5,191 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-208ENST00000399349 CHCHD2Q9Y6H1 151 aaPredicted RBP11.21□□□□□ -0.61
ITSN1-208ENST00000399349 LOC107984156A0A0G2JMH3 177 aa11.21□□□□□ -0.62
ITSN1-208ENST00000399349 LNP1A1A4G5 178 aa11.21□□□□□ -0.62
ITSN1-208ENST00000399349 IGKV3-20P01619 116 aa11.21□□□□□ -0.62
ITSN1-208ENST00000399349 SP9P0CG40 484 aa11.21□□□□□ -0.62
ITSN1-208ENST00000399349 PTGDSP41222 190 aa11.21□□□□□ -0.62
ITSN1-208ENST00000399349 FAM27E3Q08E93 113 aa11.21□□□□□ -0.62
ITSN1-208ENST00000399349 EBLN2Q6P2I7 272 aa11.21□□□□□ -0.62
ITSN1-208ENST00000399349 ARL17AQ8IVW1 177 aa11.21□□□□□ -0.62
ITSN1-208ENST00000399349 DCTN5Q9BTE1 182 aa11.21□□□□□ -0.62
ITSN1-208ENST00000399349 QSER1Q2KHR3 1735 aa11.21□□□□□ -0.62
ITSN1-208ENST00000399349 C9orf172C9J069 976 aa11.21□□□□□ -0.62
ITSN1-208ENST00000399349 TRGC1P0CF51 173 aa11.21□□□□□ -0.62
ITSN1-208ENST00000399349 SHISA5Q8N114 240 aa11.21□□□□□ -0.62
ITSN1-208ENST00000399349 OR51G1Q8NGK1 321 aa11.21□□□□□ -0.62
ITSN1-208ENST00000399349 COL11A1P12107 1806 aaPredicted RBP11.2□□□□□ -0.62
ITSN1-208ENST00000399349 RALGAPA1Q6GYQ0 2036 aa11.2□□□□□ -0.62
ITSN1-208ENST00000399349 IGHV3OR16-8A0A075B7F1 116 aa11.2□□□□□ -0.62
ITSN1-208ENST00000399349 PRR19A6NJB7 356 aa11.2□□□□□ -0.62
ITSN1-208ENST00000399349 GOLT1AQ6ZVE7 132 aa11.2□□□□□ -0.62
ITSN1-208ENST00000399349 REC114Q7Z4M0 266 aa11.2□□□□□ -0.62
ITSN1-208ENST00000399349 SLC25A28Q96A46 364 aa11.2□□□□□ -0.62
ITSN1-208ENST00000399349 A0A0G2JMM0 328 aa11.2□□□□□ -0.62
ITSN1-208ENST00000399349 A0A1W2PPB8 328 aa11.2□□□□□ -0.62
ITSN1-208ENST00000399349 A0A1W2PRS3 328 aa11.2□□□□□ -0.62
ITSN1-208ENST00000399349 KIR3DP1A8MWS1 328 aa11.2□□□□□ -0.62
ITSN1-208ENST00000399349 NDUFS6O75380 124 aaKnown RBP11.2□□□□□ -0.62
ITSN1-208ENST00000399349 HLA-DQA1P01909 254 aa11.2□□□□□ -0.62
ITSN1-208ENST00000399349 FOXA3P55318 350 aaPredicted RBP11.2□□□□□ -0.62
ITSN1-208ENST00000399349 COL5A1-AS1Q5SY13 56 aa11.2□□□□□ -0.62
ITSN1-208ENST00000399349 MIEN1Q9BRT3 115 aa11.2□□□□□ -0.62
ITSN1-208ENST00000399349 RNF115Q9Y4L5 304 aa11.2□□□□□ -0.62
ITSN1-208ENST00000399349 MYO7BQ6PIF6 2116 aa11.2□□□□□ -0.62
ITSN1-208ENST00000399349 HAX1O00165 279 aa11.2□□□□□ -0.62
ITSN1-208ENST00000399349 AREGP15514 252 aa11.2□□□□□ -0.62
ITSN1-208ENST00000399349 ZNF124Q15973 351 aa11.2□□□□□ -0.62
ITSN1-208ENST00000399349 OR4C13Q8NGP0 309 aa11.2□□□□□ -0.62
ITSN1-208ENST00000399349 TMEM45BQ96B21 275 aa11.2□□□□□ -0.62
ITSN1-208ENST00000399349 JPT1Q9UK76 154 aa11.2□□□□□ -0.62
ITSN1-208ENST00000399349 A0A0G2JK05 382 aa11.2□□□□□ -0.62
ITSN1-208ENST00000399349 PRSS2P07478 247 aa11.2□□□□□ -0.62
ITSN1-208ENST00000399349 C10orf128Q5T292 105 aa11.2□□□□□ -0.62
ITSN1-208ENST00000399349 STPG3Q8N7X2 389 aa11.2□□□□□ -0.62
ITSN1-208ENST00000399349 OR5P3Q8WZ94 311 aa11.2□□□□□ -0.62
ITSN1-208ENST00000399349 FAM90A26D6RGX4 464 aa11.19□□□□□ -0.62
ITSN1-208ENST00000399349 SS18L1O75177 396 aaPredicted RBP11.19□□□□□ -0.62
ITSN1-208ENST00000399349 MFAP4P55083 255 aa11.19□□□□□ -0.62
ITSN1-208ENST00000399349 LBHQ53QV2 105 aaPredicted RBP11.19□□□□□ -0.62
ITSN1-208ENST00000399349 OR4A47Q6IF82 309 aa11.19□□□□□ -0.62
ITSN1-208ENST00000399349 OR9G1Q8NH87 305 aa11.19□□□□□ -0.62
ITSN1-208ENST00000399349 ZCCHC14Q8WYQ9 949 aaKnown RBP11.19□□□□□ -0.62
ITSN1-208ENST00000399349 C12orf77C9JDV5 145 aa11.19□□□□□ -0.62
ITSN1-208ENST00000399349 UCNP55089 124 aa11.19□□□□□ -0.62
ITSN1-208ENST00000399349 FAM74A4Q5TZK3 123 aa11.19□□□□□ -0.62
ITSN1-208ENST00000399349 VWCEQ96DN2 955 aa11.19□□□□□ -0.62
ITSN1-208ENST00000399349 CBLN1P23435 193 aa11.19□□□□□ -0.62
ITSN1-208ENST00000399349 SPSB4Q96A44 273 aa11.19□□□□□ -0.62
ITSN1-208ENST00000399349 PHLDA3Q9Y5J5 127 aa11.19□□□□□ -0.62
ITSN1-208ENST00000399349 DICER1Q9UPY3 1922 aaKnown RBP11.19□□□□□ -0.62
ITSN1-208ENST00000399349 SYNGR3O43761 229 aa11.19□□□□□ -0.62
ITSN1-208ENST00000399349 IL4P05112 153 aa11.19□□□□□ -0.62
ITSN1-208ENST00000399349 LSM10Q969L4 123 aaKnown RBP11.19□□□□□ -0.62
ITSN1-208ENST00000399349 TXNDC17Q9BRA2 123 aa11.19□□□□□ -0.62
ITSN1-208ENST00000399349 MUC21A0A0G2JKD1 596 aa11.18□□□□□ -0.62
ITSN1-208ENST00000399349 MUC21A0A140T8X8 626 aa11.18□□□□□ -0.62
ITSN1-208ENST00000399349 IGHV3-23P01764 117 aa11.18□□□□□ -0.62
ITSN1-208ENST00000399349 PRB3Q04118 309 aaPredicted RBP11.18□□□□□ -0.62
ITSN1-208ENST00000399349 ACSF3Q4G176 576 aaPredicted RBP11.18□□□□□ -0.62
ITSN1-208ENST00000399349 MUC21Q5SSG8 566 aa11.18□□□□□ -0.62
ITSN1-208ENST00000399349 MESP1Q9BRJ9 268 aa11.18□□□□□ -0.62
ITSN1-208ENST00000399349 CBLN4Q9NTU7 201 aa11.18□□□□□ -0.62
ITSN1-208ENST00000399349 CARHSP1Q9Y2V2 147 aaKnown RBP11.18□□□□□ -0.62
ITSN1-208ENST00000399349 IGHV1-69-2A0A0G2JMI3 117 aa11.18□□□□□ -0.62
ITSN1-208ENST00000399349 COX5BP10606 129 aa11.18□□□□□ -0.62
ITSN1-208ENST00000399349 SAXO1Q8IYX7 474 aa11.18□□□□□ -0.62
ITSN1-208ENST00000399349 TMEM54Q969K7 222 aa11.18□□□□□ -0.62
ITSN1-208ENST00000399349 RCC1LQ96I51 464 aaKnown RBP11.18□□□□□ -0.62
ITSN1-208ENST00000399349 F11RQ9Y624 299 aaKnown RBP11.18□□□□□ -0.62
ITSN1-208ENST00000399349 TBX6O95947 436 aaPredicted RBP11.18□□□□□ -0.62
ITSN1-208ENST00000399349 IFI6P09912 130 aa11.18□□□□□ -0.62
ITSN1-208ENST00000399349 CX3CL1P78423 397 aa11.18□□□□□ -0.62
ITSN1-208ENST00000399349 FAM216BQ8N7L0 139 aa11.18□□□□□ -0.62
ITSN1-208ENST00000399349 CECR9P0C854 216 aa11.18□□□□□ -0.62
ITSN1-208ENST00000399349 Q6ZT83 130 aa11.18□□□□□ -0.62
ITSN1-208ENST00000399349 SMIM8Q96KF7 97 aa11.18□□□□□ -0.62
ITSN1-208ENST00000399349 IGHV3-66A0A0C4DH42 116 aa11.17□□□□□ -0.62
ITSN1-208ENST00000399349 NPIPB9F8W1W9 429 aa11.17□□□□□ -0.62
ITSN1-208ENST00000399349 ANOS1P23352 680 aa11.17□□□□□ -0.62
ITSN1-208ENST00000399349 ST6GALNAC3Q8NDV1 305 aa11.17□□□□□ -0.62
ITSN1-208ENST00000399349 COL24A1Q17RW2 1714 aa11.17□□□□□ -0.62
ITSN1-208ENST00000399349 NUDT3O95989 172 aa11.17□□□□□ -0.62
ITSN1-208ENST00000399349 IGHMP01871 453 aa11.17□□□□□ -0.62
ITSN1-208ENST00000399349 ATP5J2P56134 94 aa11.17□□□□□ -0.62
ITSN1-208ENST00000399349 ATG101Q9BSB4 218 aa11.17□□□□□ -0.62
ITSN1-208ENST00000399349 IGKV3OR2-268A0A0C4DH90 116 aa11.17□□□□□ -0.62
ITSN1-208ENST00000399349 CENPWQ5EE01 88 aa11.17□□□□□ -0.62
ITSN1-208ENST00000399349 DDB2Q92466 427 aa11.17□□□□□ -0.62
ITSN1-208ENST00000399349 LOXL4Q96JB6 756 aa11.17□□□□□ -0.62
ITSN1-208ENST00000399349 ZNF703Q9H7S9 590 aaPredicted RBP11.17□□□□□ -0.62
ITSN1-208ENST00000399349 COL11A2P13942 1736 aaPredicted RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms