RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 RARRES2Q99969 163 aa12□□□□□ -0.49
PCDHGA11-201ENST00000398587 DCTN5Q9BTE1 182 aa12□□□□□ -0.49
PCDHGA11-201ENST00000398587 CLEC5AQ9NY25 188 aa12□□□□□ -0.49
PCDHGA11-201ENST00000398587 ORM1P02763 201 aa11.99□□□□□ -0.49
PCDHGA11-201ENST00000398587 ZNF407Q9C0G0 2248 aa11.99□□□□□ -0.49
PCDHGA11-201ENST00000398587 IGKV1D-13A0A0B4J2D9 117 aa11.99□□□□□ -0.49
PCDHGA11-201ENST00000398587 IGKV1-13P0DP09 117 aa11.99□□□□□ -0.49
PCDHGA11-201ENST00000398587 HNRNPA3P51991 378 aaKnown RBP11.99□□□□□ -0.49
PCDHGA11-201ENST00000398587 C19orf35Q6ZS72 473 aa11.99□□□□□ -0.49
PCDHGA11-201ENST00000398587 BPIFA4PQ86YQ2 179 aa11.99□□□□□ -0.49
PCDHGA11-201ENST00000398587 WDR31Q8NA23 367 aa11.99□□□□□ -0.49
PCDHGA11-201ENST00000398587 PLXNA4Q9HCM2 1894 aa11.99□□□□□ -0.49
PCDHGA11-201ENST00000398587 TRAV24A0A0B4J272 114 aa11.99□□□□□ -0.49
PCDHGA11-201ENST00000398587 OR2J3O76001 311 aa11.99□□□□□ -0.49
PCDHGA11-201ENST00000398587 GATAD1Q8WUU5 269 aa11.99□□□□□ -0.49
PCDHGA11-201ENST00000398587 SNRNP40Q96DI7 357 aaKnown RBP11.99□□□□□ -0.49
PCDHGA11-201ENST00000398587 RNF126Q9BV68 326 aa11.99□□□□□ -0.49
PCDHGA11-201ENST00000398587 PNRC2Q9NPJ4 139 aaKnown RBP11.99□□□□□ -0.49
PCDHGA11-201ENST00000398587 TRBV23-1A0A0A0MS06 115 aa11.99□□□□□ -0.49
PCDHGA11-201ENST00000398587 A8MWL6 223 aa11.99□□□□□ -0.49
PCDHGA11-201ENST00000398587 PNKDQ8N490 385 aa11.99□□□□□ -0.49
PCDHGA11-201ENST00000398587 RCC1LQ96I51 464 aaKnown RBP11.99□□□□□ -0.49
PCDHGA11-201ENST00000398587 CXorf65A6NEN9 183 aa11.98□□□□□ -0.49
PCDHGA11-201ENST00000398587 PLAUP00749 431 aa11.98□□□□□ -0.49
PCDHGA11-201ENST00000398587 HIST3H3Q16695 136 aa11.98□□□□□ -0.49
PCDHGA11-201ENST00000398587 WDR82Q6UXN9 313 aa11.98□□□□□ -0.49
PCDHGA11-201ENST00000398587 IGKV1D-8A0A087WSZ0 117 aa11.98□□□□□ -0.49
PCDHGA11-201ENST00000398587 TMEM250H0YL14 139 aa11.98□□□□□ -0.49
PCDHGA11-201ENST00000398587 SNRPCP09234 159 aaKnown RBP11.98□□□□□ -0.49
PCDHGA11-201ENST00000398587 MFAP2P55001 183 aa11.98□□□□□ -0.49
PCDHGA11-201ENST00000398587 NABP2Q9BQ15 211 aa11.98□□□□□ -0.49
PCDHGA11-201ENST00000398587 GGACTQ9BVM4 153 aa11.98□□□□□ -0.49
PCDHGA11-201ENST00000398587 ARL14EPLP0DKL9 152 aa11.98□□□□□ -0.49
PCDHGA11-201ENST00000398587 RPL30P62888 115 aaKnown RBP11.98□□□□□ -0.49
PCDHGA11-201ENST00000398587 PCSK4Q6UW60 755 aa11.98□□□□□ -0.49
PCDHGA11-201ENST00000398587 ZNF497Q6ZNH5 498 aa11.98□□□□□ -0.49
PCDHGA11-201ENST00000398587 F5H697 171 aa11.98□□□□□ -0.49
PCDHGA11-201ENST00000398587 ATXN7O15265 892 aaPredicted RBP11.98□□□□□ -0.49
PCDHGA11-201ENST00000398587 CSN3P07498 182 aa11.98□□□□□ -0.49
PCDHGA11-201ENST00000398587 MFAP4P55083 255 aa11.98□□□□□ -0.49
PCDHGA11-201ENST00000398587 LRRC75BQ2VPJ9 315 aa11.98□□□□□ -0.49
PCDHGA11-201ENST00000398587 OR2D3Q8NGH3 330 aa11.98□□□□□ -0.49
PCDHGA11-201ENST00000398587 OR51G1Q8NGK1 321 aa11.98□□□□□ -0.49
PCDHGA11-201ENST00000398587 RSPO3Q9BXY4 272 aaPredicted RBP11.98□□□□□ -0.49
PCDHGA11-201ENST00000398587 HEATR1Q9H583 2144 aaKnown RBP11.98□□□□□ -0.49
PCDHGA11-201ENST00000398587 GOLT1BQ9Y3E0 138 aa11.98□□□□□ -0.49
PCDHGA11-201ENST00000398587 LINC00312Q9Y6C7 94 aa11.98□□□□□ -0.49
PCDHGA11-201ENST00000398587 PGPA6NDG6 321 aa11.97□□□□□ -0.49
PCDHGA11-201ENST00000398587 OR2T8A6NH00 312 aa11.97□□□□□ -0.49
PCDHGA11-201ENST00000398587 EIF3GO75821 320 aaKnown RBP eCLIP11.97□□□□□ -0.49
PCDHGA11-201ENST00000398587 MT-ND6P03923 174 aa11.97□□□□□ -0.49
PCDHGA11-201ENST00000398587 OR5AL1P0C617 328 aa11.97□□□□□ -0.49
PCDHGA11-201ENST00000398587 NHLH1Q02575 133 aa11.97□□□□□ -0.49
PCDHGA11-201ENST00000398587 LRP11Q86VZ4 500 aa11.97□□□□□ -0.49
PCDHGA11-201ENST00000398587 LHFPL1Q86WI0 220 aa11.97□□□□□ -0.49
PCDHGA11-201ENST00000398587 WDFY1Q8IWB7 410 aa11.97□□□□□ -0.49
PCDHGA11-201ENST00000398587 GBGT1Q8N5D6 347 aa11.97□□□□□ -0.49
PCDHGA11-201ENST00000398587 ZCCHC14Q8WYQ9 949 aaKnown RBP11.97□□□□□ -0.49
PCDHGA11-201ENST00000398587 SPSB4Q96A44 273 aa11.97□□□□□ -0.49
PCDHGA11-201ENST00000398587 RBM14Q96PK6 669 aaKnown RBP11.97□□□□□ -0.49
PCDHGA11-201ENST00000398587 HEATR5AQ86XA9 2040 aa11.97□□□□□ -0.49
PCDHGA11-201ENST00000398587 CA2P00918 260 aa11.97□□□□□ -0.49
PCDHGA11-201ENST00000398587 B3GALT5-AS1P59052 145 aa11.97□□□□□ -0.49
PCDHGA11-201ENST00000398587 ZNF506Q5JVG8 444 aa11.97□□□□□ -0.49
PCDHGA11-201ENST00000398587 UNQ5815/PRO19632Q6UWF5 114 aa11.97□□□□□ -0.49
PCDHGA11-201ENST00000398587 MDS2Q8NDY4 140 aa11.97□□□□□ -0.49
PCDHGA11-201ENST00000398587 NPIPB3Q92617 1050 aa11.97□□□□□ -0.49
PCDHGA11-201ENST00000398587 FRMPD3Q5JV73 1810 aa11.97□□□□□ -0.49
PCDHGA11-201ENST00000398587 TRAV30A0A087WSZ9 112 aa11.97□□□□□ -0.49
PCDHGA11-201ENST00000398587 C19orf67A6NJJ6 358 aa11.97□□□□□ -0.49
PCDHGA11-201ENST00000398587 SH2D7A6NKC9 451 aaPredicted RBP11.97□□□□□ -0.49
PCDHGA11-201ENST00000398587 A8MXK9 166 aa11.97□□□□□ -0.49
PCDHGA11-201ENST00000398587 M0R2Z0 102 aa11.97□□□□□ -0.49
PCDHGA11-201ENST00000398587 OTX1P32242 354 aaPredicted RBP11.97□□□□□ -0.49
PCDHGA11-201ENST00000398587 C18orf12Q96KH6 178 aa11.97□□□□□ -0.49
PCDHGA11-201ENST00000398587 DOCK7Q96N67 2140 aa11.97□□□□□ -0.49
PCDHGA11-201ENST00000398587 PRO1933Q9H354 126 aa11.96□□□□□ -0.49
PCDHGA11-201ENST00000398587 IGKV3-7A0A075B6H7 116 aa11.96□□□□□ -0.49
PCDHGA11-201ENST00000398587 YPEL1O60688 119 aa11.96□□□□□ -0.49
PCDHGA11-201ENST00000398587 COX6B1P14854 86 aa11.96□□□□□ -0.49
PCDHGA11-201ENST00000398587 C11orf42Q8N5U0 333 aa11.96□□□□□ -0.49
PCDHGA11-201ENST00000398587 STPG3Q8N7X2 389 aa11.96□□□□□ -0.49
PCDHGA11-201ENST00000398587 YPEL2Q96QA6 119 aa11.96□□□□□ -0.49
PCDHGA11-201ENST00000398587 DOCK9Q9BZ29 2069 aa11.96□□□□□ -0.5
PCDHGA11-201ENST00000398587 IGHV1-18A0A0C4DH31 117 aa11.96□□□□□ -0.5
PCDHGA11-201ENST00000398587 H0YIZ8 118 aa11.96□□□□□ -0.5
PCDHGA11-201ENST00000398587 PPOXP50336 477 aa11.96□□□□□ -0.5
PCDHGA11-201ENST00000398587 IBA57Q5T440 356 aaKnown RBP11.96□□□□□ -0.5
PCDHGA11-201ENST00000398587 PRNTQ86SH4 94 aa11.96□□□□□ -0.5
PCDHGA11-201ENST00000398587 PLSCR4Q9NRQ2 329 aa11.96□□□□□ -0.5
PCDHGA11-201ENST00000398587 UFC1Q9Y3C8 167 aa11.96□□□□□ -0.5
PCDHGA11-201ENST00000398587 ETV2O00321 342 aaPredicted RBP11.96□□□□□ -0.5
PCDHGA11-201ENST00000398587 APCSP02743 223 aa11.96□□□□□ -0.5
PCDHGA11-201ENST00000398587 ELOBQ15370 118 aa11.96□□□□□ -0.5
PCDHGA11-201ENST00000398587 OR4A47Q6IF82 309 aa11.96□□□□□ -0.5
PCDHGA11-201ENST00000398587 NEU4Q8WWR8 484 aaPredicted RBP11.96□□□□□ -0.5
PCDHGA11-201ENST00000398587 MRPL32Q9BYC8 188 aaKnown RBP11.96□□□□□ -0.5
PCDHGA11-201ENST00000398587 MRPL37Q9BZE1 423 aaKnown RBP11.96□□□□□ -0.5
PCDHGA11-201ENST00000398587 PARLQ9H300 379 aa11.96□□□□□ -0.5
PCDHGA11-201ENST00000398587 TICRRQ7Z2Z1 1910 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms