RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 TMEM11P17152 192 aa16.97■□□□□ 0.31
CPNE1-204ENST00000397443 PSMB6P28072 239 aa16.97■□□□□ 0.31
CPNE1-204ENST00000397443 NKX2-1P43699 371 aaPredicted RBP16.97■□□□□ 0.31
CPNE1-204ENST00000397443 LGALS7P47929 136 aa16.97■□□□□ 0.31
CPNE1-204ENST00000397443 RELBQ01201 579 aa16.97■□□□□ 0.31
CPNE1-204ENST00000397443 IL15RAQ13261 267 aa16.97■□□□□ 0.31
CPNE1-204ENST00000397443 VMA21Q3ZAQ7 101 aa16.97■□□□□ 0.31
CPNE1-204ENST00000397443 CLCC1Q96S66 551 aa16.97■□□□□ 0.31
CPNE1-204ENST00000397443 SSX3Q99909 188 aa16.97■□□□□ 0.31
CPNE1-204ENST00000397443 AIFM2Q9BRQ8 373 aa16.97■□□□□ 0.31
CPNE1-204ENST00000397443 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.97■□□□□ 0.31
CPNE1-204ENST00000397443 TRAV14DV4A0A0A6YYC5 116 aa16.96■□□□□ 0.31
CPNE1-204ENST00000397443 SNAPC5O75971 98 aa16.96■□□□□ 0.31
CPNE1-204ENST00000397443 MPC2O95563 127 aa16.96■□□□□ 0.31
CPNE1-204ENST00000397443 FSHBP01225 129 aa16.96■□□□□ 0.31
CPNE1-204ENST00000397443 OPN1MWP04001 364 aa16.96■□□□□ 0.31
CPNE1-204ENST00000397443 FAM106CPP0CH98 169 aa16.96■□□□□ 0.31
CPNE1-204ENST00000397443 OPN1MW2P0DN77 364 aa16.96■□□□□ 0.31
CPNE1-204ENST00000397443 OPN1MW3P0DN78 364 aa16.96■□□□□ 0.31
CPNE1-204ENST00000397443 POLR2GP62487 172 aaKnown RBP eCLIP16.96■□□□□ 0.31
CPNE1-204ENST00000397443 PLGLAQ15195 96 aa16.96■□□□□ 0.31
CPNE1-204ENST00000397443 PSG5Q15238 335 aa16.96■□□□□ 0.31
CPNE1-204ENST00000397443 POU2AF1Q16633 256 aa16.96■□□□□ 0.31
CPNE1-204ENST00000397443 DEFB112Q30KQ8 113 aa16.96■□□□□ 0.31
CPNE1-204ENST00000397443 ASB13Q8WXK3 278 aa16.96■□□□□ 0.31
CPNE1-204ENST00000397443 TSNAXQ99598 290 aaKnown RBP16.96■□□□□ 0.31
CPNE1-204ENST00000397443 FBXL15Q9H469 300 aa16.96■□□□□ 0.31
CPNE1-204ENST00000397443 METTL1Q9UBP6 276 aaKnown RBP16.96■□□□□ 0.31
CPNE1-204ENST00000397443 FXYD6-FXYD2A0A087WZ82 144 aa16.96■□□□□ 0.3
CPNE1-204ENST00000397443 NCBP2LA6PVI3 153 aaKnown RBP16.96■□□□□ 0.3
CPNE1-204ENST00000397443 PITX3O75364 302 aa16.96■□□□□ 0.3
CPNE1-204ENST00000397443 KBTBD11O94819 623 aa16.96■□□□□ 0.3
CPNE1-204ENST00000397443 SLC25A6P12236 298 aa16.96■□□□□ 0.3
CPNE1-204ENST00000397443 PUSL1Q8N0Z8 303 aaKnown RBP16.96■□□□□ 0.3
CPNE1-204ENST00000397443 OR11H4Q8NGC9 324 aa16.96■□□□□ 0.3
CPNE1-204ENST00000397443 GRPEL2Q8TAA5 225 aa16.96■□□□□ 0.3
CPNE1-204ENST00000397443 MTORP42345 2549 aa16.95■□□□□ 0.3
CPNE1-204ENST00000397443 TET2Q6N021 2002 aaPredicted RBP16.95■□□□□ 0.3
CPNE1-204ENST00000397443 FAM90A9PA6NNJ1 464 aa16.95■□□□□ 0.3
CPNE1-204ENST00000397443 KCNAB3O43448 404 aa16.95■□□□□ 0.3
CPNE1-204ENST00000397443 UBE2KP61086 200 aa16.95■□□□□ 0.3
CPNE1-204ENST00000397443 PJVKQ0ZLH3 352 aa16.95■□□□□ 0.3
CPNE1-204ENST00000397443 MEGF9Q9H1U4 602 aa16.95■□□□□ 0.3
CPNE1-204ENST00000397443 BET1LQ9NYM9 111 aa16.95■□□□□ 0.3
CPNE1-204ENST00000397443 MBD2Q9UBB5 411 aa16.95■□□□□ 0.3
CPNE1-204ENST00000397443 CYSRT1A8MQ03 144 aa16.94■□□□□ 0.3
CPNE1-204ENST00000397443 H0YIZ8 118 aa16.94■□□□□ 0.3
CPNE1-204ENST00000397443 K7EPK0 472 aa16.94■□□□□ 0.3
CPNE1-204ENST00000397443 UPK2O00526 184 aa16.94■□□□□ 0.3
CPNE1-204ENST00000397443 ST8SIA3O43173 380 aa16.94■□□□□ 0.3
CPNE1-204ENST00000397443 SSSCA1O60232 199 aa16.94■□□□□ 0.3
CPNE1-204ENST00000397443 SRP14P37108 136 aaKnown RBP16.94■□□□□ 0.3
CPNE1-204ENST00000397443 LY6EQ16553 131 aa16.94■□□□□ 0.3
CPNE1-204ENST00000397443 C11orf87Q6NUJ2 197 aa16.94■□□□□ 0.3
CPNE1-204ENST00000397443 TMEM219Q86XT9 240 aa16.94■□□□□ 0.3
CPNE1-204ENST00000397443 FAM71E2Q8N5Q1 922 aa16.94■□□□□ 0.3
CPNE1-204ENST00000397443 OR5AC2Q9NZP5 309 aa16.94■□□□□ 0.3
CPNE1-204ENST00000397443 RCL1Q9Y2P8 373 aaKnown RBP16.94■□□□□ 0.3
CPNE1-204ENST00000397443 HIVEP1P15822 2718 aa16.94■□□□□ 0.3
CPNE1-204ENST00000397443 H3BUX3 64 aa16.94■□□□□ 0.3
CPNE1-204ENST00000397443 WRBO00258 174 aa16.94■□□□□ 0.3
CPNE1-204ENST00000397443 NBR2O15453 112 aa16.94■□□□□ 0.3
CPNE1-204ENST00000397443 OR2F2O95006 317 aa16.94■□□□□ 0.3
CPNE1-204ENST00000397443 IFNA17P01571 189 aa16.94■□□□□ 0.3
CPNE1-204ENST00000397443 C1QBP02746 253 aa16.94■□□□□ 0.3
CPNE1-204ENST00000397443 BPIFB3P59826 476 aa16.94■□□□□ 0.3
CPNE1-204ENST00000397443 FGL1Q08830 312 aa16.94■□□□□ 0.3
CPNE1-204ENST00000397443 VSTM2AQ8TAG5 236 aa16.94■□□□□ 0.3
CPNE1-204ENST00000397443 THAP6Q8TBB0 222 aa16.94■□□□□ 0.3
CPNE1-204ENST00000397443 HINT2Q9BX68 163 aa16.94■□□□□ 0.3
CPNE1-204ENST00000397443 ZNF430Q9H8G1 570 aaPredicted RBP16.94■□□□□ 0.3
CPNE1-204ENST00000397443 COA4Q9NYJ1 87 aa16.94■□□□□ 0.3
CPNE1-204ENST00000397443 KIAA1456Q9P272 454 aa16.94■□□□□ 0.3
CPNE1-204ENST00000397443 C15orf61A6NNL5 157 aa16.93■□□□□ 0.3
CPNE1-204ENST00000397443 LY6G6DO95868 133 aa16.93■□□□□ 0.3
CPNE1-204ENST00000397443 EIF2B2P49770 351 aaKnown RBP16.93■□□□□ 0.3
CPNE1-204ENST00000397443 GNB1P62873 340 aa16.93■□□□□ 0.3
CPNE1-204ENST00000397443 LRRC75BQ2VPJ9 315 aa16.93■□□□□ 0.3
CPNE1-204ENST00000397443 Q71RC1 249 aaPredicted RBP16.93■□□□□ 0.3
CPNE1-204ENST00000397443 NOXA1Q86UR1 476 aa16.93■□□□□ 0.3
CPNE1-204ENST00000397443 TNFRSF19Q9NS68 423 aa16.93■□□□□ 0.3
CPNE1-204ENST00000397443 POMT1Q9Y6A1 747 aa16.93■□□□□ 0.3
CPNE1-204ENST00000397443 HIVEP2P31629 2446 aa16.92■□□□□ 0.3
CPNE1-204ENST00000397443 RRHO14718 337 aa16.92■□□□□ 0.3
CPNE1-204ENST00000397443 IAPPP10997 89 aa16.92■□□□□ 0.3
CPNE1-204ENST00000397443 RPL8P62917 257 aaKnown RBP16.92■□□□□ 0.3
CPNE1-204ENST00000397443 ID3Q02535 119 aa16.92■□□□□ 0.3
CPNE1-204ENST00000397443 TNFRSF9Q07011 255 aa16.92■□□□□ 0.3
CPNE1-204ENST00000397443 PIFOQ8TCI5 191 aa16.92■□□□□ 0.3
CPNE1-204ENST00000397443 ZDHHC16Q969W1 377 aa16.92■□□□□ 0.3
CPNE1-204ENST00000397443 RNF5Q99942 180 aa16.92■□□□□ 0.3
CPNE1-204ENST00000397443 RNF126Q9BV68 326 aa16.92■□□□□ 0.3
CPNE1-204ENST00000397443 SIGLEC9Q9Y336 463 aa16.92■□□□□ 0.3
CPNE1-204ENST00000397443 OR51B2Q9Y5P1 312 aa16.92■□□□□ 0.3
CPNE1-204ENST00000397443 IL6RP08887 468 aaPredicted RBP16.92■□□□□ 0.3
CPNE1-204ENST00000397443 CD99P14209 185 aa16.92■□□□□ 0.3
CPNE1-204ENST00000397443 EBI3Q14213 229 aa16.92■□□□□ 0.3
CPNE1-204ENST00000397443 Q8N6K4 173 aa16.92■□□□□ 0.3
CPNE1-204ENST00000397443 TMEM167AQ8TBQ9 72 aa16.92■□□□□ 0.3
CPNE1-204ENST00000397443 DCUN1D4Q92564 292 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms