RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 DRAM1Q8N682 238 aa2.85□□□□□ -1.95
VPS13C-203ENST00000395896 OR4F17Q8NGA8 305 aa2.85□□□□□ -1.95
VPS13C-203ENST00000395896 NPAS1Q99742 590 aa2.85□□□□□ -1.95
VPS13C-203ENST00000395896 F2RL2O00254 374 aa2.85□□□□□ -1.95
VPS13C-203ENST00000395896 NDUFS6O75380 124 aaKnown RBP2.85□□□□□ -1.95
VPS13C-203ENST00000395896 FAM3BP58499 235 aaPredicted RBP2.85□□□□□ -1.95
VPS13C-203ENST00000395896 CLRN3Q8NCR9 226 aa2.85□□□□□ -1.95
VPS13C-203ENST00000395896 TRAV24A0A0B4J272 114 aa2.84□□□□□ -1.95
VPS13C-203ENST00000395896 IGHV3-64DA0A0J9YX35 117 aa2.84□□□□□ -1.95
VPS13C-203ENST00000395896 UBE2L5PA0A1B0GUS4 154 aa2.84□□□□□ -1.95
VPS13C-203ENST00000395896 SERTM2A0A1B0GWG4 89 aa2.84□□□□□ -1.95
VPS13C-203ENST00000395896 A0A1W2PS18 150 aa2.84□□□□□ -1.95
VPS13C-203ENST00000395896 ADRA2AP08913 450 aa2.84□□□□□ -1.95
VPS13C-203ENST00000395896 OR5G3P0C626 314 aa2.84□□□□□ -1.95
VPS13C-203ENST00000395896 SSTR5P35346 364 aa2.84□□□□□ -1.95
VPS13C-203ENST00000395896 GPX4P36969 197 aaPredicted RBP2.84□□□□□ -1.95
VPS13C-203ENST00000395896 CNN1P51911 297 aaKnown RBP2.84□□□□□ -1.95
VPS13C-203ENST00000395896 Q8TCH9 128 aa2.84□□□□□ -1.95
VPS13C-203ENST00000395896 RXFP4Q8TDU9 374 aa2.84□□□□□ -1.95
VPS13C-203ENST00000395896 SSC4DQ8WTU2 575 aa2.84□□□□□ -1.95
VPS13C-203ENST00000395896 A0A0G2JLM5 398 aa2.84□□□□□ -1.95
VPS13C-203ENST00000395896 RBFOX3A6NFN3 312 aa2.84□□□□□ -1.95
VPS13C-203ENST00000395896 DUTP33316 252 aaKnown RBP2.84□□□□□ -1.95
VPS13C-203ENST00000395896 PPP1CCP36873 323 aaKnown RBP2.84□□□□□ -1.95
VPS13C-203ENST00000395896 AVPI1Q5T686 147 aa2.84□□□□□ -1.95
VPS13C-203ENST00000395896 RPL7L1Q6DKI1 246 aaKnown RBP2.84□□□□□ -1.95
VPS13C-203ENST00000395896 BPIFA4PQ86YQ2 179 aa2.84□□□□□ -1.95
VPS13C-203ENST00000395896 OR5R1Q8NH85 324 aa2.84□□□□□ -1.95
VPS13C-203ENST00000395896 TAF15Q92804 592 aaKnown RBP eCLIP2.84□□□□□ -1.95
VPS13C-203ENST00000395896 ONECUT1Q9UBC0 465 aa2.84□□□□□ -1.95
VPS13C-203ENST00000395896 NF1P21359 2839 aa2.84□□□□□ -1.95
VPS13C-203ENST00000395896 M0R1W7 72 aa2.84□□□□□ -1.95
VPS13C-203ENST00000395896 OR2C1O95371 312 aa2.84□□□□□ -1.95
VPS13C-203ENST00000395896 MT-ND6P03923 174 aa2.84□□□□□ -1.95
VPS13C-203ENST00000395896 ATP6V0CP27449 155 aa2.84□□□□□ -1.95
VPS13C-203ENST00000395896 RPL27AP46776 148 aaKnown RBP2.84□□□□□ -1.95
VPS13C-203ENST00000395896 BTN1A1Q13410 526 aa2.84□□□□□ -1.95
VPS13C-203ENST00000395896 FFAR4Q5NUL3 377 aa2.84□□□□□ -1.95
VPS13C-203ENST00000395896 OR4P4Q8NGL7 312 aa2.84□□□□□ -1.95
VPS13C-203ENST00000395896 TMUB1Q9BVT8 246 aa2.84□□□□□ -1.95
VPS13C-203ENST00000395896 COX7A2P2O60397 106 aa2.84□□□□□ -1.95
VPS13C-203ENST00000395896 CD81P60033 236 aa2.84□□□□□ -1.95
VPS13C-203ENST00000395896 DMRTC1Q5HYR2 192 aa2.84□□□□□ -1.95
VPS13C-203ENST00000395896 ZNF818PQ6ZRF7 136 aa2.84□□□□□ -1.95
VPS13C-203ENST00000395896 TMEM140Q9NV12 185 aa2.84□□□□□ -1.95
VPS13C-203ENST00000395896 BAHCC1Q9P281 2608 aa2.84□□□□□ -1.95
VPS13C-203ENST00000395896 NKX2-6A6NCS4 301 aa2.84□□□□□ -1.95
VPS13C-203ENST00000395896 BCL2P10415 239 aa2.84□□□□□ -1.95
VPS13C-203ENST00000395896 ERVK11-1P61568 191 aa2.84□□□□□ -1.95
VPS13C-203ENST00000395896 DLK1P80370 383 aa2.84□□□□□ -1.95
VPS13C-203ENST00000395896 TMEM241Q24JQ0 296 aa2.84□□□□□ -1.95
VPS13C-203ENST00000395896 PHYHD1Q5SRE7 291 aa2.84□□□□□ -1.95
VPS13C-203ENST00000395896 TMEM144Q7Z5S9 345 aa2.84□□□□□ -1.95
VPS13C-203ENST00000395896 ABHD12Q8N2K0 398 aa2.84□□□□□ -1.95
VPS13C-203ENST00000395896 ADAD2Q8NCV1 583 aaKnown RBP2.84□□□□□ -1.95
VPS13C-203ENST00000395896 MRPL30Q8TCC3 161 aaKnown RBP2.84□□□□□ -1.95
VPS13C-203ENST00000395896 TRAV1-1A0A0B4J248 108 aa2.84□□□□□ -1.95
VPS13C-203ENST00000395896 WNT5AP41221 380 aa2.84□□□□□ -1.95
VPS13C-203ENST00000395896 EFNA4P52798 201 aa2.84□□□□□ -1.95
VPS13C-203ENST00000395896 UBE2G2P60604 165 aa2.84□□□□□ -1.95
VPS13C-203ENST00000395896 TBR1Q16650 682 aa2.84□□□□□ -1.95
VPS13C-203ENST00000395896 TMEM182Q6ZP80 229 aaPredicted RBP2.84□□□□□ -1.95
VPS13C-203ENST00000395896 GFI1Q99684 422 aa2.84□□□□□ -1.95
VPS13C-203ENST00000395896 OR1A1Q9P1Q5 309 aa2.84□□□□□ -1.95
VPS13C-203ENST00000395896 SSX4O60224 188 aa2.84□□□□□ -1.95
VPS13C-203ENST00000395896 PDLIM4P50479 330 aa2.84□□□□□ -1.95
VPS13C-203ENST00000395896 LYPD6Q86Y78 171 aa2.84□□□□□ -1.95
VPS13C-203ENST00000395896 TMEM230Q96A57 120 aa2.84□□□□□ -1.95
VPS13C-203ENST00000395896 TXN2Q99757 166 aa2.84□□□□□ -1.95
VPS13C-203ENST00000395896 RTBDNQ9BSG5 229 aaPredicted RBP2.84□□□□□ -1.95
VPS13C-203ENST00000395896 WDR61Q9GZS3 305 aaKnown RBP2.84□□□□□ -1.95
VPS13C-203ENST00000395896 C15orf61A6NNL5 157 aa2.84□□□□□ -1.96
VPS13C-203ENST00000395896 HIST1H1EP10412 219 aaKnown RBP2.84□□□□□ -1.96
VPS13C-203ENST00000395896 C4orf17Q53FE4 359 aa2.84□□□□□ -1.96
VPS13C-203ENST00000395896 CCL13Q99616 98 aa2.84□□□□□ -1.96
VPS13C-203ENST00000395896 TMEM133Q9H2Q1 129 aa2.84□□□□□ -1.96
VPS13C-203ENST00000395896 ZNF355PQ9NSJ1 428 aa2.84□□□□□ -1.96
VPS13C-203ENST00000395896 RCL1Q9Y2P8 373 aaKnown RBP2.84□□□□□ -1.96
VPS13C-203ENST00000395896 CD5P06127 495 aa2.84□□□□□ -1.96
VPS13C-203ENST00000395896 OR13C7P0DN81 318 aa2.84□□□□□ -1.96
VPS13C-203ENST00000395896 DYNLT3P51808 116 aa2.84□□□□□ -1.96
VPS13C-203ENST00000395896 HDHD3Q9BSH5 251 aaPredicted RBP2.84□□□□□ -1.96
VPS13C-203ENST00000395896 SSBP3Q9BWW4 388 aaPredicted RBP2.84□□□□□ -1.96
VPS13C-203ENST00000395896 COL25A1Q9BXS0 654 aaPredicted RBP2.84□□□□□ -1.96
VPS13C-203ENST00000395896 NOTCH1P46531 2555 aa2.84□□□□□ -1.96
VPS13C-203ENST00000395896 RHBDL1O75783 438 aa2.84□□□□□ -1.96
VPS13C-203ENST00000395896 ZNF735P0CB33 412 aa2.84□□□□□ -1.96
VPS13C-203ENST00000395896 COX6B1P14854 86 aa2.84□□□□□ -1.96
VPS13C-203ENST00000395896 G0S2P27469 103 aa2.84□□□□□ -1.96
VPS13C-203ENST00000395896 ZNF674Q2M3X9 581 aa2.84□□□□□ -1.96
VPS13C-203ENST00000395896 ZNF474Q6S9Z5 364 aaPredicted RBP2.84□□□□□ -1.96
VPS13C-203ENST00000395896 FRZBQ92765 325 aa2.84□□□□□ -1.96
VPS13C-203ENST00000395896 NCBP2LA6PVI3 153 aaKnown RBP2.84□□□□□ -1.96
VPS13C-203ENST00000395896 ADAM10O14672 748 aa2.84□□□□□ -1.96
VPS13C-203ENST00000395896 CLEC3BP05452 202 aa2.84□□□□□ -1.96
VPS13C-203ENST00000395896 RPS10P46783 165 aaKnown RBP2.84□□□□□ -1.96
VPS13C-203ENST00000395896 ANKRD55Q3KP44 614 aa2.84□□□□□ -1.96
VPS13C-203ENST00000395896 OR4A47Q6IF82 309 aa2.84□□□□□ -1.96
VPS13C-203ENST00000395896 PPP1R27Q86WC6 154 aa2.84□□□□□ -1.96
VPS13C-203ENST00000395896 OR8I2Q8N0Y5 310 aa2.84□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms